Chromosome 4 - RH Maps - Single Contig

Chromosome 4 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_026996	NT_006111	NT_022865	NT_006081	NT_033075	NT_029956	NT_006051	NT_033060
NT_033064	NT_006362	NT_006307	NT_006342	NT_029958	NT_016407	NT_033056	NT_030649
NT_006344	NT_023072	NT_033076	NT_006350	NT_006285	NT_006316	NT_023052	NT_006189
NT_022794	NT_006305	NT_022751	NT_022995	NT_033067	NT_006098	NT_029274	NT_033069
NT_016297	NT_022782	NT_033059	NT_006238	NT_022831	NT_022853	NT_022850	NT_022778
NT_022852	NT_033063	NT_022813	NT_022836	NT_022862	NT_006303	NT_030640	NT_033073
NT_006281	NT_006216	NT_033072	NT_022760	NT_006109	NT_006328	NT_022844	NT_030642
NT_006114	NT_030659	NT_006204	NT_033074	NT_023068	NT_006201	NT_006383	NT_006397
NT_033061	NT_033068	NT_006365	NT_028147	NT_028173	NT_006371	NT_025694	NT_031780
NT_016599	NT_031781	NT_016354	NT_033055	NT_033062	NT_033065	NT_006167	NT_006302
NT_022755	NT_022753	NT_022803	NT_022846	NT_022856	NT_022805	NT_022819	NT_022845
NT_006124	NT_022811	NT_006127	NT_006258	NT_016606	NT_029950	NT_028160	NT_029954
NT_022851	NT_022832	NT_015169	NT_006129	NT_022740	NT_029955	NT_022801	NT_022824
NT_006171	NT_022776	NT_022768	NT_006198	NT_006257	NT_022775	NT_006118	NT_022792
NT_006256	NT_006169	NT_022841	NT_033070	NT_022800	NT_033066	NT_033071	NT_028146
NT_029961	NT_025688

NT_006342

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_006342	AC110768	9486080	1	RH47531	4	61.22					1		AC106864, AC110768
S/G/Y/R/B/O	NT_006342	AC110768	9488833	1	RH80311	4	60.27					1		AC106864, AC110768
S/G/Y/R/B/O	NT_006342	AC110768	9488868	1	RH59454	4	61.16			4	78.30	1		AC106864, AC110768
S/G/Y/R/B/O	NT_006342	AC110768	9497201	1	RH94209	4	61.22					1		AC106864, AC110768
S/G/Y/R/B/O	NT_006342	AC110768	9499919	1	RH92896	4	61.16					1		AC106864, AC110768
S/G/Y/R/B/O	NT_006342	AC110768	9532757	1	RH94039	4	72.00					1		AC106864, AC110768
S/G/Y/R/B/O	NT_006342	AC005599	9534598	3
S/G/Y/R/B/O	NT_006342	AC084048	9788564	3	RH98451	4	72.00					1	AC108151,	AC084048, AC108151
S/G/Y/R/B/O	NT_006342	AC108151	10494212	1	AFM087ZG5					4	78.20	1		AC108151
S/G/Y/R/B/O	NT_006342	AC007117	9827045	1
S/G/Y/R/B/O	NT_006342	AC112231	9831848	1
S/G/Y/R/B/O	NT_006342	AC023150	9907495	3	RH42494	4	61.16			4	68.50	1		AC023150
S/G/Y/R/B/O	NT_006342	AC027625	10063824	3	AFM164TG11					4	75.40	1	AC112231,	AC027625, AC112231
S/G/Y/R/B/O	NT_006342	AC097529	10207981	3
S/G/Y/R/B/O	NT_006342	AC073991	10411693	1	RH14193			4	814.00			1	AC006230,	AC006230, AC073991
S/G/Y/R/B/O	NT_006342	AC073991	10412828	1	RH78843	4	72.00					1	AC006230,	AC006230, AC073991
S/G/Y/R/B/O	NT_006342	AC006230	10449605	3	WI-18339					4	78.20	1		AC006230
S/G/Y/R/B/O	NT_006342	AC006230	10449605	3	RH59506	4	72.00					1		AC006230
S/G/Y/R/B/O	NT_006342		-		RH102486	4	61.16					1	AC005674, AC009528,	AC005674, AC009528
S/G/Y/R/B/O	NT_006342		-		WI-9872					4	78.30	1	AC006499,	AC006499
S/G/Y/R/B/O	NT_006342		-		RH36867	4	60.90					1	AC009528, AC093664,	AC009528, AC093664
S/G/Y/R/B/O	NT_006342		-		RH59339	4	61.16			4	78.30	1	AC009528, AC093664,	AC009528, AC093664
S/G/Y/R/B/O	NT_006342		-		WI-945					4	78.30	1	AC006499, AC009528,	AC006499, AC009528
S/G/Y/R/B/O	NT_006342		-		RH59373	4	61.16			4	78.30	3	AC098976,	AC098976
S/G/Y/R/B/O	NT_006342		-		RH59589	4	61.16	4	711.00	4	78.30	1	AC067775, AC098976,	AC067775, AC098976, AC108199
S/G/Y/R/B/O	NT_006342		-		RH76349	4	60.37					1	Z68225,	Z68225
S/G/Y/R/B/O	NT_006342		-		WI-5551					4	78.30	1	AC067775, AC098976,	AC067775, AC098976, AC108199
S/G/Y/R/B/O	NT_006342		-		RH91526	4	61.11					0
S/G/Y/R/B/O	NT_006342		-		SGC33644					4	78.30	1	AC067775, AC098976,	AC067775, AC098976, AC108199