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  Chromosome X - RH Maps - Single Contig
 

Chromosome X - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_025273
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_025273AL358796685807071RH47603X247.00    1AC053508, AL356513, AC053508, AL355528, AL356513, AL358796
S/G/Y/R/B/O NT_025273AC053508676624091          
S/G/Y/R/B/O NT_025273AL353999677202753RH48872X243.55    1 AL353999
S/G/Y/R/B/O NT_025273AL353999677866643RH102401X243.55    2AJ239320, AJ239320, AL353999
S/G/Y/R/B/O NT_025273AL353999677898873RH63567X242.08    2AJ239320, AJ239320, AL353999
S/G/Y/R/B/O NT_025273AL353999677898873WI-14887    X178.202AJ239320, AJ239320, AL353999
S/G/Y/R/B/O NT_025273AL662864678411811          
S/G/Y/R/B/O NT_025273AL135750678448972          
S/G/Y/R/B/O NT_025273AC004389680221433          
S/G/Y/R/B/O NT_025273AC004074681248203RH94019X241.96    1 AC004074
S/G/Y/R/B/O NT_025273AC004074681381893RH252551737.53    1 AF126962
S/G/Y/R/B/O NT_025273AL512507682647003          
S/G/Y/R/B/O NT_025273AL450108684372711RH70575X241.74    1AL358796, AL358796, AL450108
S/G/Y/R/B/O NT_025273AL356513685963333          
S/G/Y/R/B/O NT_025273U80460687078633          
S/G/Y/R/B/O NT_025273AL353804687203613RH17241X245.32    1U80460, AL353804, AL683895, U80460
S/G/Y/R/B/O NT_025273AL353804687213543RH18196X245.32    1U80460, AL353804, AL683895, U80460
S/G/Y/R/B/O NT_025273AL353804687229783RH7810  X2030.00  1U80460, AL353804, AL683895, U80460
S/G/Y/R/B/O NT_025273AL353804687229783RH8591  X2030.00  1U80460, AL353804, AL683895, U80460
S/G/Y/R/B/O NT_025273AL353804687249913RH47941X245.32    1U80460, AL353804, AL683895, M97168, U80460
S/G/Y/R/B/O NT_025273AL353804687255033RH28279X246.32    1U80460, AL353804, AL683895, M97168, U80460
S/G/Y/R/B/O NT_025273AL353804687436033RH103941X245.32    1U80460, AL353804, AL683895, M97168, U80460
S/G/Y/R/B/O NT_025273AL353804687471903RH17329X245.32    1U80460, AL353804, AL683895, M97168, U80460
S/G/Y/R/B/O NT_025273AL353804687472063RH16556X242.82    1U80460, AL353804, AL683895, M97168, U80460
S/G/Y/R/B/O NT_025273AL353804687763443RH3663011379.26    2AP000757, AP000834, AL450994, AP000683, AP000757, AP000834
S/G/Y/R/B/O NT_025273AL353804688010473RH74399X245.32    1 AC023014
S/G/Y/R/B/O NT_025273AL353804688440283RH68558X245.32    1 AC023014, AL353804, AL450994
S/G/Y/R/B/O NT_025273AL139400688872743RH46225X245.81    1 AC023014, AL139400, AL450994
S/G/Y/R/B/O NT_025273AL139400689031333RH7940  X2030.00  1 AC023014, AL139400, AL450994
S/G/Y/R/B/O NT_025273AL139400689039043RH63337X246.66X2030.00  1 AC023014, AL139400, AL161635, AL450994
S/G/Y/R/B/O NT_025273AL139400689039043SGC32313    X176.701 AC023014, AL139400, AL161635, AL450994
S/G/Y/R/B/O NT_025273AL139400689115283RH26439X245.32    1 AC023014, AL139400, AL161635, AL450994
S/G/Y/R/B/O NT_025273AL139400689116033RH63579X245.76    1 AC023014, AL139400, AL161635, AL450994
S/G/Y/R/B/O NT_025273AL139400689116033WI-11090    X176.701 AC023014, AL139400, AL161635, AL450994
S/G/Y/R/B/O NT_025273AL139400689277733RH63289X245.65X2030.00  1 AC002414, AL139400
S/G/Y/R/B/O NT_025273AL139400689277733SGC33275    X176.701 AC002414, AL139400
S/G/Y/R/B/O NT_025273AL139400689546943AFM352TF5    X207.701 AL139400
S/G/Y/R/B/O NT_025273AL139400689671163RH32385  X1924.00  1 AL139400
S/G/Y/R/B/O NT_025273AL627389689712373          
S/G/Y/R/B/O NT_025273AL359740690324753RH46387X247.00    2AC012362, AC012362, AL359740
S/G/Y/R/B/O NT_025273AL359740690341733RH65903X244.57    2AC090719, AC025249, AC027367, AC090719, AC105936, AL359740
S/G/Y/R/B/O NT_025273Z83843690961043RH25705X246.03    1 Z83843
S/G/Y/R/B/O NT_025273Z83843691048773RH63446X244.34X2024.00X206.001 Z83843
S/G/Y/R/B/O NT_025273Z83843691190293RH68565X243.38    1AC004386, AC004386, Z83843
S/G/Y/R/B/O NT_025273Z83843691264733RH18206X243.82    1AC004386, AC004386, Z83843
S/G/Y/R/B/O NT_025273Z83843691342023RH8928  X2024.00  1AC004386, AC004386, Z83843
S/G/Y/R/B/O NT_025273Z83843691371313RH67435X245.25    1AC004386, AC004386, Z83843
S/G/Y/R/B/O NT_025273Z83843691500393RH63704X245.02X2017.00X206.301AC004386, AC004386, Z83843
S/G/Y/R/B/O NT_025273Z83843691642143RH35790X245.25    1AC004386, AC002418, AC004386, Z83843
S/G/Y/R/B/O NT_025273Z83843691669723RH36104X245.13    1AC004386, AC002418, AC004386, Z83843


  NT_025273 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_025273AC004386692752663RH47306964.15    4AC044812, AC067942, AC110420, AL161909, AL391834, AC004386, AC044812, AC067942, AC109451, AC110420, AL161909, AL391834, AL590805, M77232, X67309
S/G/Y/R/B/O NT_025273AL138891692851753          
S/G/Y/R/B/O NT_025273AC004073692964523          
S/G/Y/R/B/O NT_025273AL157934694306703RH13986  X2007.00  1 AL390202
S/G/Y/R/B/O NT_025273AL157934694325953RH70539X244.57    1 AC002419, AL157934, AL390202, U05321
S/G/Y/R/B/O NT_025273AL513007694843663RH63669X244.34  X204.301 AL513007
S/G/Y/R/B/O NT_025273AL513007694844153RH17155X244.57    1 AL513007
S/G/Y/R/B/O NT_025273AL139395696336923RH18195X246.66    1AC067848, AC067848, AL139395
S/G/Y/R/B/O NT_025273AL139395696337373RH63320X245.87  X203.801AC067848, AC067848, AL139395
S/G/Y/R/B/O NT_025273AL139395696350193RH26069X248.92    1AC067848, AC067848, AL139395
S/G/Y/R/B/O NT_025273AL390035697150763          
S/G/Y/R/B/O NT_025273AL359545699461013RH689  X1977.00  1 AC002417, AL359545, AL359548
S/G/Y/R/B/O NT_025273AL359545699524153RH63439X246.77  X203.401 AC002417, AL359545, AL359548
S/G/Y/R/B/O NT_025273AL359545699537593RH102593X243.48    1 AC002417, AL359545, AL359548
S/G/Y/R/B/O NT_025273AL590232699901763          
S/G/Y/R/B/O NT_025273AL360179699902701          
S/G/Y/R/B/O NT_025273AL590234701493853          
S/G/Y/R/B/O NT_025273AL137013702033783RH63586X246.77X1992.00X210.401 AL137013
S/G/Y/R/B/O NT_025273AL137013702067713RH44972X242.41    1 AL137013
S/G/Y/R/B/O NT_025273AL137013702256023RH626278375.77  8461.904AC022893, AL163204, AL359737, AC022893, AL050303, AL137013, AL163204, AL359737
S/G/Y/R/B/O NT_025273AL391055703288753          
S/G/Y/R/B/O NT_025273AC020717703289693          
S/G/Y/R/B/O NT_025273AL589167704953033          
S/G/Y/R/B/O NT_025273AL391495706362483RH76403X246.77    1 AL391495
S/G/Y/R/B/O NT_025273AL391495706821043RH37926  X1971.00  1 AL391495
S/G/Y/R/B/O NT_025273AL451105707545103          
S/G/Y/R/B/O NT_025273AC067848708797981          
S/G/Y/R/B/O NT_025273 - RH27242X243.89    0  
S/G/Y/R/B/O NT_025273 - WI-17398    X195.401AL138743, AL138743, AL606518
S/G/Y/R/B/O NT_025273 - RH35748X245.70    1AL590763, AJ315767, AL159989, AL590763
S/G/Y/R/B/O NT_025273 - CHLC.GATA69D06    X197.100  
S/G/Y/R/B/O NT_025273 - RH36631X246.55    0  
S/G/Y/R/B/O NT_025273 - WI-4137    X197.101AL138743, AL138743, AL606518
S/G/Y/R/B/O NT_025273 - RH48573X245.02    2AL590763, AL590763, AL590763, AL590763
S/G/Y/R/B/O NT_025273 - RH63340X243.16    1AL356358, AL356358
S/G/Y/R/B/O NT_025273 - RH63583X243.27    0  
S/G/Y/R/B/O NT_025273 - RH32208  X2020.00X198.901AL645821, AL645821, Z94753
S/G/Y/R/B/O NT_025273 - RH8007  X1974.00  1AL096827, AL096827
S/G/Y/R/B/O NT_025273 - CHLC.GATA31D10    X199.601AL009028, AL009028
S/G/Y/R/B/O NT_025273 - WI-20932    X201.801AL021786, AL021786