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  Chromosome X - RH Maps - Single Contig
 

Chromosome X - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_011757
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011757AC112497267925771          
S/G/Y/R/B/O NT_011757AC061988274888491RH78665X90.70    1AC096510, AC112497, AC061988, AC096510, AC112497
S/G/Y/R/B/O NT_011757AC061988274907251RH103251X88.99    1AC112497, AC061988, AC112497
S/G/Y/R/B/O NT_011757AC073597268008703          
S/G/Y/R/B/O NT_011757AC004103269200043          
S/G/Y/R/B/O NT_011757AC078993270956571RH63486X92.22X206.00X7.401 AC078993
S/G/Y/R/B/O NT_011757AC004025272374223RH764525378.80    5AC009634, AC009761, AC010260, AC012636, AC026920, AC084198, AC098476, AC104641, AC113561, AC004025, AC009634, AC009761, AC010260, AC012636, AC012659, AC026920, AC084198, AC098476, AC104641, AC113561, AF311104, AJ297357
S/G/Y/R/B/O NT_011757AC004106273976743RH66697X90.70    1AC096510, AC004106, AC096510
S/G/Y/R/B/O NT_011757AC004106274125953RH104372X90.70    1AC096510, AC004106, AC096510, AL359996
S/G/Y/R/B/O NT_011757AC004106274181143RH91863X90.70    1AC096510, AC004106, AC096510
S/G/Y/R/B/O NT_011757AC004106274221803RH17799X90.70    1AC096510, AC004106, AC096510
S/G/Y/R/B/O NT_011757AC004106274224353RH47350X88.99    1AC096510, AC004106, AC096510
S/G/Y/R/B/O NT_011757AC004106274224433RH47344X88.99    1AC096510, AC004106, AC096510
S/G/Y/R/B/O NT_011757AC004106274252753RH713285470.44    1AC096510, AC004106, AC096510
S/G/Y/R/B/O NT_011757AC096510274657911RH47691X88.99    1 AC096510
S/G/Y/R/B/O NT_011757AC003669275916823WI-5123    X7.401AC058807, AC097625, AC003669, AC058807, AC097625
S/G/Y/R/B/O NT_011757AC003669276306303RH92830X90.70    1AC058807, AC003669, AC058807
S/G/Y/R/B/O NT_011757AC003669276355263RH68178X90.70    1AC058807, AC097625, AC003669, AC058807, AC097625
S/G/Y/R/B/O NT_011757AC003669276410423DXS1053    X16.101AC058807, AC097625, AC058807, AC097625
S/G/Y/R/B/O NT_011757AC003669276410423RH37069X90.70    1AC058807, AC097625, AC058807, AC097625
S/G/Y/R/B/O NT_011757AC058807276983531WI-1795    X5.501AC097625, AC058807, AC097625
S/G/Y/R/B/O NT_011757AC097625277039061          
S/G/Y/R/B/O NT_011757AC023414277700001          
S/G/Y/R/B/O NT_011757U75931278303643          
S/G/Y/R/B/O NT_011757AC095351278924181RH63595X88.99  X5.501 AC095351, U69570
S/G/Y/R/B/O NT_011757AC095351278925401RH38706X90.70    1 AC095351, U69570
S/G/Y/R/B/O NT_011757AC095351279052171RH367688105.90    2AC011726, AC011726, AC095351, U69570
S/G/Y/R/B/O NT_011757AC095351279320141RH91522X88.99    1 AC095351
S/G/Y/R/B/O NT_011757AC095351279321061RH76142X90.70    1 AC095351
S/G/Y/R/B/O NT_011757AC095351279499351RH63366X90.70  X5.501 AC095351
S/G/Y/R/B/O NT_011757AC095351279581741RH38693X90.70    1 AC095351, D28791
S/G/Y/R/B/O NT_011757AC022490280346791RH102971X92.73    1AC095351, AC112920, AC022490, AC095351, AC112920
S/G/Y/R/B/O NT_011757AC112920280088091          
S/G/Y/R/B/O NT_011757AC112498280998781          
S/G/Y/R/B/O NT_011757AC016075280999561          
S/G/Y/R/B/O NT_011757AC006061283547643RH25053X107.78    1 AC006061
S/G/Y/R/B/O NT_011757AC006061283548703RH35774X106.25    1 AC006061
S/G/Y/R/B/O NT_011757AC079143283606983          
S/G/Y/R/B/O NT_011757AC078958284128953RH80233X109.70    1 AC078958
S/G/Y/R/B/O NT_011757AC078958284296253RH92485X107.78    1 AC078958
S/G/Y/R/B/O NT_011757AC078958284770443RH7549X107.88  X25.901 AC078958
S/G/Y/R/B/O NT_011757AC078958284770443RH400  X376.00  1 AC078958
S/G/Y/R/B/O NT_011757AC090632285495493          
S/G/Y/R/B/O NT_011757AC079177285989883RH26866X59.79    1 AC073398, AC079177
S/G/Y/R/B/O NT_011757AC079175288073493WI-5635    X24.401 AC079175
S/G/Y/R/B/O NT_011757AC079175288137933RH44295X107.78    1 AC079175
S/G/Y/R/B/O NT_011757AC093167288966443          
S/G/Y/R/B/O NT_011757AC079864290084403RH63475X104.75  X18.601 AC079864, M65035, X51934
S/G/Y/R/B/O NT_011757AC079864290139283DXS1067    X23.001 AC079864
S/G/Y/R/B/O NT_011757AC079864290139733RH29868  X416.00  1 AC079864


  NT_011757 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011757AC079864290963193RH7744X107.88  X25.901 AC021166, AC079864
S/G/Y/R/B/O NT_011757AC093193291298783          
S/G/Y/R/B/O NT_011757AC078957292102333          
S/G/Y/R/B/O NT_011757AC096506294072323          
S/G/Y/R/B/O NT_011757AL139278295253603          
S/G/Y/R/B/O NT_011757AL109609295446223          
S/G/Y/R/B/O NT_011757AL031542296536203          
S/G/Y/R/B/O NT_011757AL596023297858103          
S/G/Y/R/B/O NT_011757AC004468297878063          
S/G/Y/R/B/O NT_011757AL096699299328363WI-4123    X23.301 AL096699, U60822
S/G/Y/R/B/O NT_011757AL096699299725413RH35792X105.67    1 AL096699, U60822
S/G/Y/R/B/O NT_011757AL121880301033443          
S/G/Y/R/B/O NT_011757AL451144301903093          
S/G/Y/R/B/O NT_011757AL139401302904163          
S/G/Y/R/B/O NT_011757AL049643303625563RH71402X100.33    1 AL049643
S/G/Y/R/B/O NT_011757AL049643303667873WI-10707    X29.601 AL049643
S/G/Y/R/B/O NT_011757AL031643304434063RH92487X107.68    1 AF276053, AL031643
S/G/Y/R/B/O NT_011757AL050305306332173WI-2974    X29.301 AL050305
S/G/Y/R/B/O NT_011757AL050305306456423RH27893X100.39    1 AL050305
S/G/Y/R/B/O NT_011757AL592168306982493          
S/G/Y/R/B/O NT_011757AL591591307329573          
S/G/Y/R/B/O NT_011757AL591378308350742          
S/G/Y/R/B/O NT_011757AL627092309990903          
S/G/Y/R/B/O NT_011757AL591395310153743          
S/G/Y/R/B/O NT_011757AL591501310756573WI-5586    X29.601 AC021598, AL591501
S/G/Y/R/B/O NT_011757AL591625312498903          
S/G/Y/R/B/O NT_011757AL596284313904723          
S/G/Y/R/B/O NT_011757AL592043314485512          
S/G/Y/R/B/O NT_011757AL592504316309423          
S/G/Y/R/B/O NT_011757AL596285318614893RH67914X112.16    1 AL596285
S/G/Y/R/B/O NT_011757AL596285318615503RH76140X112.80    1  
S/G/Y/R/B/O NT_011757AL596285318636923RH38760X110.82    1 AL596285
S/G/Y/R/B/O NT_011757AL606662319115903          
S/G/Y/R/B/O NT_011757AL596245319938363          
S/G/Y/R/B/O NT_011757AL645585321674543          
S/G/Y/R/B/O NT_011757AL596268322213243          
S/G/Y/R/B/O NT_011757AL590075323756803RH651767568.75    2AC004594, AC004594, AC009430, AL590075
S/G/Y/R/B/O NT_011757AL354769324663693          
S/G/Y/R/B/O NT_011757AL451103325778952          
S/G/Y/R/B/O NT_011757AL360087327531793          
S/G/Y/R/B/O NT_011757AL359734328299293          
S/G/Y/R/B/O NT_011757AL161722329178771          
S/G/Y/R/B/O NT_011757AL606784330704713          
S/G/Y/R/B/O NT_011757AL590065330972082          
S/G/Y/R/B/O NT_011757AL603753332825943          
S/G/Y/R/B/O NT_011757AL606467334187603          
S/G/Y/R/B/O NT_011757AL606516336192453RH103898X112.80    1 AL606516
S/G/Y/R/B/O NT_011757AL590285336437982          
S/G/Y/R/B/O NT_011757AL592156338377093          
S/G/Y/R/B/O NT_011757AC083940340033791          


  NT_011757 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011757 - RH35737X111.42    0AL627245, AL627245
S/G/Y/R/B/O NT_011757 - RH38250  X376.00  0  
S/G/Y/R/B/O NT_011757 - DXS992    X24.400AC023001, AC023001
S/G/Y/R/B/O NT_011757 - WI-13533    X27.600