Chromosome X - RH Maps - Single Contig

Chromosome X - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_028427	NT_028413	NT_033330	NT_025302	NT_011735	NT_029505	NT_030875	NT_011649
NT_025291	NT_030874	NT_030885	NT_011812	NT_011832	NT_030887	NT_011775	NT_011772
NT_033338	NT_025352	NT_011724	NT_011586	NT_011754	NT_027220	NT_011694	NT_011662
NT_011530	NT_025960	NT_030890	NT_011535	NT_011536	NT_030191	NT_011753	NT_011766
NT_025940	NT_030873	NT_025323	NT_025318	NT_030889	NT_011752	NT_011757	NT_011657
NT_011793	NT_011692	NT_025348	NT_011568	NT_033332	NT_033319	NT_011611	NT_011638
NT_033329	NT_027215	NT_025961	NT_011836	NT_011799	NT_011618	NT_028400	NT_025297
NT_011630	NT_029503	NT_011669	NT_029502	NT_019696	NT_033336	NT_033321	NT_011594
NT_025273	NT_033334	NT_031924	NT_011544	NT_011597	NT_011689	NT_025320	NT_025329
NT_025376	NT_025312	NT_025306	NT_011687	NT_025949	NT_033327	NT_025330	NT_027217
NT_033328	NT_011651	NT_027218	NT_011765	NT_025280	NT_025319	NT_025299	NT_011819
NT_011783	NT_033326	NT_011565	NT_025265	NT_028405	NT_028406	NT_011588	NT_011667
NT_011613	NT_011786	NT_025267	NT_011834	NT_011719	NT_028403	NT_029504	NT_011574
NT_026503	NT_011681	NT_011851	NT_011537	NT_019686	NT_026504	NT_025309	NT_011602
NT_033323	NT_033335	NT_033325	NT_033322	NT_011598	NT_011726	NT_029507	NT_033333
NT_011637	NT_025345	NT_033324	NT_025965	NT_025307

NT_011692

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_011692	Z92844	39575144	3
S/G/Y/R/B/O	NT_011692	AL590074	39726942	3
S/G/Y/R/B/O	NT_011692	AL451086	39826626	3	CHLC.GATA69C12					X	45.40	1		AL451086
S/G/Y/R/B/O	NT_011692	AL049735	39888581	3	DXS6745					X	48.50	1		AL049735
S/G/Y/R/B/O	NT_011692	AL022158	39936214	3
S/G/Y/R/B/O	NT_011692	AL591587	40044362	3
S/G/Y/R/B/O	NT_011692	AL023574	40121129	3
S/G/Y/R/B/O	NT_011692	Z97181	40236856	3
S/G/Y/R/B/O	NT_011692	AL358474	40375605	2
S/G/Y/R/B/O	NT_011692	AL109855	40443784	3	AFMA040YF9					X	46.90	1		AL109855
S/G/Y/R/B/O	NT_011692	AL020990	40493422	3	RH63438	X	130.56			X	45.40	1		AL020990, X60819
S/G/Y/R/B/O	NT_011692	AL020990	40493464	3	RH2085			X	892.00			1		AL020990, X60819
S/G/Y/R/B/O	NT_011692	AL020990	40494256	3	RH76094	X	116.53					1		AL020990, X60819
S/G/Y/R/B/O	NT_011692	AL020990	40495327	3	RH68364	X	130.56					1		AL020990, X60819
S/G/Y/R/B/O	NT_011692	AL020990	40515560	3	RH8817			X	923.00			1		AL020990
S/G/Y/R/B/O	NT_011692	AL020990	40515588	3	WI-20404					X	45.40	1		AL020990
S/G/Y/R/B/O	NT_011692	AL020990	40515588	3	RH63518	X	129.54					1		AL020990
S/G/Y/R/B/O	NT_011692	AL020990	40516014	3	RH7866			X	952.00			1		AL020990
S/G/Y/R/B/O	NT_011692	AL008709	40578230	3	WI-5485					X	45.40	1		AL008709
S/G/Y/R/B/O	NT_011692	AL008709	40586676	3	RH45779	X	129.57					1		AL008709
S/G/Y/R/B/O	NT_011692	Z95125	40592769	3	RH35769	X	129.57					1		Z95125
S/G/Y/R/B/O	NT_011692	Z95125	40614758	3	RH38707	X	130.56					1		Z95125
S/G/Y/R/B/O	NT_011692	Z95125	40649986	3	RH12779	3	410.45					2	AC019247, AC108693,	AC019247, AC022184, AC108693, Z95125
S/G/Y/R/B/O	NT_011692	AL034370	40697729	3	RH13907			X	897.00	X	45.40	1		AC022184, AL034370
S/G/Y/R/B/O	NT_011692	AL034370	40697729	3	RH63560	X	129.57					1		AC022184, AL034370
S/G/Y/R/B/O	NT_011692	AL034370	40751722	3	AFMA212ZG1					X	45.40	1		AC017073, AC022184, AL034370
S/G/Y/R/B/O	NT_011692	AL359744	40788674	3
S/G/Y/R/B/O	NT_011692	AL133344	40911424	3
S/G/Y/R/B/O	NT_011692	AC018719	41079868	3
S/G/Y/R/B/O	NT_011692	AL022163	41272757	3	WI-16570					X	44.20	1		AL022163
S/G/Y/R/B/O	NT_011692	AL022163	41272757	3	RH63447	X	129.03					1		AL022163
S/G/Y/R/B/O	NT_011692	AL136137	41276765	3
S/G/Y/R/B/O	NT_011692	AL031311	41403805	3
S/G/Y/R/B/O	NT_011692	AL133545	41593482	3	RH63582	X	133.30	X	942.00	X	44.20	1		AL133545
S/G/Y/R/B/O	NT_011692	AL133545	41593661	3	RH16599	X	133.51					1		AL133545
S/G/Y/R/B/O	NT_011692	AL138744	41819710	3	RH66464	X	133.30					1		AL138744
S/G/Y/R/B/O	NT_011692	AC021608	41835373	1
S/G/Y/R/B/O	NT_011692		-		RH16839	X	132.59					0
S/G/Y/R/B/O	NT_011692		-		RH8705			X	894.00			1	AC005296,	AC005296
S/G/Y/R/B/O	NT_011692		-		RH63643	X	133.30					0