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  Chromosome X - RH Maps - Single Contig
 

Chromosome X - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_027217
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_027217AL590069978526523RH103532X274.09    1 AL590069, Z81367
S/G/Y/R/B/O NT_027217AL035609980060283RH80772X273.36    1 AL035609
S/G/Y/R/B/O NT_027217AL035551980917513RH25904X299.70    1 AL035551
S/G/Y/R/B/O NT_027217AL035551980961213RH25014X275.30    1 AL035551
S/G/Y/R/B/O NT_027217AL035427981421823RH8875  X3229.00  1 AL035427
S/G/Y/R/B/O NT_027217AL035427982094483RH78520X274.99    1 AL035427
S/G/Y/R/B/O NT_027217AL035427982156273RH27022X277.23    1 AL035427
S/G/Y/R/B/O NT_027217AL590407982752353          
S/G/Y/R/B/O NT_027217Z68871983774793RH93084X295.05    1 AL008882, Z68871
S/G/Y/R/B/O NT_027217AL669904983909403          
S/G/Y/R/B/O NT_027217Z95624984309253RH63599X295.05  X273.001 AL008882, Z95624
S/G/Y/R/B/O NT_027217AL645812984333323          
S/G/Y/R/B/O NT_027217Z93943984334283          
S/G/Y/R/B/O NT_027217Z75895984564023RH38761X277.23    1 Z75895
S/G/Y/R/B/O NT_027217Z75895984564603RH45776X295.05    1 Z75895
S/G/Y/R/B/O NT_027217Z73361984933923          
S/G/Y/R/B/O NT_027217AL008708985548293RH63494X295.05  X273.001 AL008708
S/G/Y/R/B/O NT_027217AL008708985548513RH18267X277.23    2AL133348, AL008708, AL022169, AL133348, Z70233
S/G/Y/R/B/O NT_027217Z75746985680413RH79750X279.87    1 Z75746
S/G/Y/R/B/O NT_027217Z75746985681023RH102997X295.05    1 Z75746
S/G/Y/R/B/O NT_027217Z75746985832973RH463591590.69    2AC080153, AC080153, AC090783, Z75746
S/G/Y/R/B/O NT_027217Z85997986044743          
S/G/Y/R/B/O NT_027217AL035494987091683RH80982X280.87    1 AL035494
S/G/Y/R/B/O NT_027217AL035494987092083RH46879X275.61    1 AL035494
S/G/Y/R/B/O NT_027217Z81014987136893          
S/G/Y/R/B/O NT_027217Z68694987451863RH35755X274.99    1 Z68694
S/G/Y/R/B/O NT_027217Z68694987452473RH25033X277.43    1 Z68694
S/G/Y/R/B/O NT_027217Z68694987455413RH38776X277.43    1 Z68694
S/G/Y/R/B/O NT_027217AL133348988015243RH63636X274.92    1 AL022169, AL133348, Z70233
S/G/Y/R/B/O NT_027217AL133348988015243WI-15922    X264.801 AL022169, AL133348, Z70233
S/G/Y/R/B/O NT_027217AL133348988015453RH18267X277.23    2AL008708, AL008708, AL022169, AL133348, Z70233
S/G/Y/R/B/O NT_027217Z92846988242803RH12449X274.89    1 Z92846
S/G/Y/R/B/O NT_027217Z92846988504253RH17103X277.43    1 Z92846
S/G/Y/R/B/O NT_027217AL606763988699943RH35772X275.61    1 AL606763
S/G/Y/R/B/O NT_027217AL606763988700283RH38733X277.33    1 AL606763
S/G/Y/R/B/O NT_027217AL079333989151733          
S/G/Y/R/B/O NT_027217AL117327989691823RH15665X277.33    1 AC025230, AL117327
S/G/Y/R/B/O NT_027217Z69733989731783          
S/G/Y/R/B/O NT_027217AL035444990192933RH31532  X3205.00  1 AC025230, AL035444
S/G/Y/R/B/O NT_027217AL021308990414883          
S/G/Y/R/B/O NT_027217Z73965990797563RH76711X279.35    1 AC025230, Z73965
S/G/Y/R/B/O NT_027217Z73965990823473RH45868X274.26    1 AC025230, Z73965
S/G/Y/R/B/O NT_027217Z73965991016783RH33446  X3205.00  1 Z73965
S/G/Y/R/B/O NT_027217Z73965991018123RH78743X273.47    1 AC025230, Z73965
S/G/Y/R/B/O NT_027217Z73965991046193RH17462X276.53    1 AC025230, Z73965
S/G/Y/R/B/O NT_027217Z73965991047873RH63432X274.89    1 AC025230, Z73965
S/G/Y/R/B/O NT_027217Z73965991047873TIGR-A005E02    X271.901 AC025230, Z73965
S/G/Y/R/B/O NT_027217Z68327991054963          
S/G/Y/R/B/O NT_027217AL049610991226133RH38740X277.43    1 AF095906, AL049610
S/G/Y/R/B/O NT_027217AL049610991229223RH80258X277.53    1 AF095906, AL049610


  NT_027217 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_027217AL049610991676833RH63553X277.43X3205.00  1 AL049610
S/G/Y/R/B/O NT_027217AL049610991676833WI-7238    X265.001 AL049610
S/G/Y/R/B/O NT_027217AL049610991676873RH14987  X3205.00  1 AL049610
S/G/Y/R/B/O NT_027217AL049610991677523RH17381X277.43    1 AL049610
S/G/Y/R/B/O NT_027217AL049610991844833RH26349X274.26    1 AL049610
S/G/Y/R/B/O NT_027217AL049610992059163RH46065X274.26    1 AL049610
S/G/Y/R/B/O NT_027217Z93848992105343          
S/G/Y/R/B/O NT_027217AL034409992502333          
S/G/Y/R/B/O NT_027217Z73964992827773RH13838  X3205.00  1AC027160, AC027160, AJ006976, M15032, Z73964
S/G/Y/R/B/O NT_027217Z73964992840763NIB2031    X271.501AC027160, AC027160, AJ006976, M15032, Z73964
S/G/Y/R/B/O NT_027217AL139228993146063RH99150X277.43    1AC027160, AC027160, AL139228
S/G/Y/R/B/O NT_027217AL139228993151903RH63322X277.43    1AC027160, AC027160, AL139228
S/G/Y/R/B/O NT_027217AL139228993151903WI-21742    X265.001AC027160, AC027160, AL139228
S/G/Y/R/B/O NT_027217Z75896993360073          
S/G/Y/R/B/O NT_027217AL139229993739493          
S/G/Y/R/B/O NT_027217AL390022993898993          
S/G/Y/R/B/O NT_027217Z70273993990763          
S/G/Y/R/B/O NT_027217Z70227994575193RH38715X277.43    1 Z70227
S/G/Y/R/B/O NT_027217AL034485994699133RH93628X277.43    2Z73497, AL034485, Z73497
S/G/Y/R/B/O NT_027217AC027160995153931          
S/G/Y/R/B/O NT_027217 - RH101929X275.02    1AL049631, AL049631
S/G/Y/R/B/O NT_027217 - RH31533  X3181.00  1 AC022962
S/G/Y/R/B/O NT_027217 - RH104213X275.02    1AL135959, AL135959
S/G/Y/R/B/O NT_027217 - RH33321  X3181.00  1Z83850, AC026977, Z83850
S/G/Y/R/B/O NT_027217 - RH38777X276.53    0  
S/G/Y/R/B/O NT_027217 - RH63540X275.02    1AL135959, AL135959