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  Chromosome X - RH Maps - Single Contig
 

Chromosome X - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_011719
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011719AL0786381313905903RH63443X319.49X4218.00  1 AL078638
S/G/Y/R/B/O NT_011719AL0786381313905903SGC31168    X302.101 AL078638
S/G/Y/R/B/O NT_011719AL0786381314027543RH27169X319.59    1 AL078638, AL670274
S/G/Y/R/B/O NT_011719AL0786381314044153RH35898X319.80    1 AL078638, AL670274
S/G/Y/R/B/O NT_011719AL0786381314306363RH35767X320.11    1AC008040, AC008040, AL078638, AL670274
S/G/Y/R/B/O NT_011719AL0786381314311343RH63696X320.11    1 AL078638, AL670274
S/G/Y/R/B/O NT_011719AL0786381314311343WI-18109    X302.101 AL078638, AL670274
S/G/Y/R/B/O NT_011719AL0786381314317493RH63281X319.69    1 AL078638, AL670274
S/G/Y/R/B/O NT_011719AL0786381314317493WI-6213    X302.901 AL078638, AL670274
S/G/Y/R/B/O NT_011719AL0786381314376803RH38791X320.11    1 AL078638, AL670274
S/G/Y/R/B/O NT_011719AL0786381315160783RH4498413280.20    2AL137249, AL078638, AL137249, AL670274
S/G/Y/R/B/O NT_011719AL0786381315166593RH48488X326.61    1 AL078638, AL670274
S/G/Y/R/B/O NT_011719AL0786381315245503WI-1333    X302.901 AL078638, AL670274
S/G/Y/R/B/O NT_011719AL1361671315443793          
S/G/Y/R/B/O NT_011719AL1617781316082253          
S/G/Y/R/B/O NT_011719Z976321317128093RH38720X320.11    1 AL591434, X76498, Z97632
S/G/Y/R/B/O NT_011719Z976321317318703RH48850X320.11    1 AL591434, Z97632
S/G/Y/R/B/O NT_011719Z976321317322193RH48015X326.61    1 AL591434, Z97632
S/G/Y/R/B/O NT_011719Z976321317326843RH75926X319.69    1 AL591434, Z97632
S/G/Y/R/B/O NT_011719Z976321317771763RH91434X319.69    1 AC000115, AL591434, Z97632
S/G/Y/R/B/O NT_011719Z976321317772143RH8759  X4231.00  1 AC000115, AL591434, Z97632
S/G/Y/R/B/O NT_011719AL4452471317951793          
S/G/Y/R/B/O NT_011719AL1357831318808293RH17600X320.00    1 AL135783
S/G/Y/R/B/O NT_011719AL1357831318862143RH63343X319.69    1 AL135783
S/G/Y/R/B/O NT_011719AL1357831318862143SGC30410    X302.901 AL135783
S/G/Y/R/B/O NT_011719AL1357831318863403RH25247X320.11    1 AL135783
S/G/Y/R/B/O NT_011719AL1357831318863683RH17397X320.11    1 AL135783
S/G/Y/R/B/O NT_011719AL6838131320684711RH14991  X4231.00  1AC022220, AC022220, AL683813
S/G/Y/R/B/O NT_011719AL6838131320684711RH63503X326.61    1AC022220, AC022220, AL683813
S/G/Y/R/B/O NT_011719AL6838131320684711SGC31764    X304.401AC022220, AC022220, AL683813
S/G/Y/R/B/O NT_011719AL6838131320686151RH26346X326.51    1AC022220, AC022220, AL683813
S/G/Y/R/B/O NT_011719AL6838131320934791RH45175X326.51    1AC022220, AC022220, AL683813
S/G/Y/R/B/O NT_011719AL6838131320941231RH63442X326.61    2AC022220, AC022220, AL683813
S/G/Y/R/B/O NT_011719AL6838131320941231WI-7865    X304.402AC022220, AC022220, AL683813
S/G/Y/R/B/O NT_011719AC0222201320999441RH63492X326.51    1AL683813, AC022220, AL683813
S/G/Y/R/B/O NT_011719AC0222201320999441WI-11365    X301.701AL683813, AC022220, AL683813
S/G/Y/R/B/O NT_011719AL3908791322185782RH94287X326.51    1 AL356783, AL390879
S/G/Y/R/B/O NT_011719AL3537881323136613          
S/G/Y/R/B/O NT_011719AL3553091324763003          
S/G/Y/R/B/O NT_011719AL5134901325690843          
S/G/Y/R/B/O NT_011719AL0225761326346353RH93406X321.33    1 AL022576, AL391317
S/G/Y/R/B/O NT_011719AL0354431327369453WI-3482    X301.201 AL035443, AL391317, Z96804
S/G/Y/R/B/O NT_011719AL5913981328299083          
S/G/Y/R/B/O NT_011719AL1387461329197813          
S/G/Y/R/B/O NT_011719Z960741330629883RH28565X321.23    1 Z96074
S/G/Y/R/B/O NT_011719Z960741330687403RH38755X321.54    1 Z96074
S/G/Y/R/B/O NT_011719AL3600051330894083          
S/G/Y/R/B/O NT_011719AL3921731330974353          
S/G/Y/R/B/O NT_011719AC0192121334420663RH15227X321.23    1 AC019212, AL445194
S/G/Y/R/B/O NT_011719AC0192121334420663RH921  X4243.00  1 AC019212, AL445194


  NT_011719 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011719AC0192121334467773WI-2361    X304.301AL359703, AC019212, AL353584, AL359703, AL445194
S/G/Y/R/B/O NT_011719AL3597031334624213          
S/G/Y/R/B/O NT_011719AL5123741336337863          
S/G/Y/R/B/O NT_011719Z813111336884603          
S/G/Y/R/B/O NT_011719AL5123751337322873          
S/G/Y/R/B/O NT_011719AL3571231337700843          
S/G/Y/R/B/O NT_011719AL0313861338528523RH63549X320.61    1 AL031386
S/G/Y/R/B/O NT_011719AL0313861338528523WI-19784    X301.201 AL031386
S/G/Y/R/B/O NT_011719AL0313861338529593RH28623X321.03    1 AL031386
S/G/Y/R/B/O NT_011719AL0313861338536303RH28571X323.06    1 AL031386
S/G/Y/R/B/O NT_011719Z821931338804853          
S/G/Y/R/B/O NT_011719Z833131339785943          
S/G/Y/R/B/O NT_011719Z822041341186033RH63562X323.16    1 AC023448
S/G/Y/R/B/O NT_011719Z822041341186033WI-11452    X300.001 AC023448
S/G/Y/R/B/O NT_011719AL0238001341474853          
S/G/Y/R/B/O NT_011719AL0344161342205173          
S/G/Y/R/B/O NT_011719AL0237981342519403          
S/G/Y/R/B/O NT_011719AL0343981343599263          
S/G/Y/R/B/O NT_011719Z810071343614323          
S/G/Y/R/B/O NT_011719Z809031344442833          
S/G/Y/R/B/O NT_011719Z829751345071453RH15667X323.06    1 Z82975
S/G/Y/R/B/O NT_011719AL0352621345754563          
S/G/Y/R/B/O NT_011719AL0087131346434083WI-4535    X300.001 AL008713
S/G/Y/R/B/O NT_011719AL0968871346709033          
S/G/Y/R/B/O NT_011719 - RH102075X320.11    0  
S/G/Y/R/B/O NT_011719 - RH32200  X4231.00  0AL135783, AL135783
S/G/Y/R/B/O NT_011719 - RH16753X320.11    0  
S/G/Y/R/B/O NT_011719 - RH7862  X4235.00  1AC109993, AC087225, AC109993