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Chromosome X - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_028405
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_028405AL5896771108173543          
S/G/Y/R/B/O NT_028405AC0070221109466763          
S/G/Y/R/B/O NT_028405AL5914021110172173          
S/G/Y/R/B/O NT_028405AC0070251110219303          
S/G/Y/R/B/O NT_028405AC0048221110734873          
S/G/Y/R/B/O NT_028405AL5900971112180593RH104450X291.65    1 AL590097
S/G/Y/R/B/O NT_028405AL3558121113114253RH70924X289.62    1 AL355812
S/G/Y/R/B/O NT_028405AL3558121113125583RH35751X291.03    1 AL355812
S/G/Y/R/B/O NT_028405AL3558121113146623RH12101X291.13    1 AL355812
S/G/Y/R/B/O NT_028405AL1218781115154763RH63622X289.62    1 AL121878
S/G/Y/R/B/O NT_028405AL1218781115154763NIB1759    X264.901 AL121878
S/G/Y/R/B/O NT_028405AL4451641115236463          
S/G/Y/R/B/O NT_028405AL5897861115547463          
S/G/Y/R/B/O NT_028405AL1097511117620903WI-10694    X263.401 AL109751
S/G/Y/R/B/O NT_028405AL1359211117633963          
S/G/Y/R/B/O NT_028405AL0495911117783173RH42517X289.62    1 AL049591
S/G/Y/R/B/O NT_028405AL0495911118430523WI-5191    X263.401 AL049591
S/G/Y/R/B/O NT_028405AC0039831119852593RH38687X288.40    1 AC003983
S/G/Y/R/B/O NT_028405AL5898421120311683RH103779X291.13    1 AL589842
S/G/Y/R/B/O NT_028405AC0050001120548013RH38792X288.40    1 AC005000
S/G/Y/R/B/O NT_028405AC0050001120697743RH91535X291.13    4AL353717, AC005000, AC114979, AL353717
S/G/Y/R/B/O NT_028405AC0050001121085693RH6483511228.98    4AC004230, AC008038, AC073322, AC083873, AC093665, AP002990, AC004230, AC005000, AC008038, AC073322, AC083873, AC083901, AC093665, AP000434, AP001363, AP002990
S/G/Y/R/B/O NT_028405AC0050001121315673RH65677X289.62    4AL392170, AL392170, AL392170, AL392170, AL392170, AL392170, AC005000, AC005000, AC005000, AL392170, AL392170, AL392170, AL392170, AL392170, AL392170, L07935, S60754
S/G/Y/R/B/O NT_028405AC0050001121345293RH65677X289.62    4AL392170, AL392170, AL392170, AL392170, AL392170, AL392170, AC005000, AC005000, AC005000, AL392170, AL392170, AL392170, AL392170, AL392170, AL392170, L07935, S60754
S/G/Y/R/B/O NT_028405AC0050001121383573RH65677X289.62    4AL392170, AL392170, AL392170, AL392170, AL392170, AL392170, AC005000, AC005000, AC005000, AL392170, AL392170, AL392170, AL392170, AL392170, AL392170, L07935, S60754
S/G/Y/R/B/O NT_028405 - RH92441X291.13    1AC027640, AC027640