Chromosome X - RH Maps - Single Contig

Chromosome X - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_028427	NT_028413	NT_033330	NT_025302	NT_011735	NT_029505	NT_030875	NT_011649
NT_025291	NT_030874	NT_030885	NT_011812	NT_011832	NT_030887	NT_011775	NT_011772
NT_033338	NT_025352	NT_011724	NT_011586	NT_011754	NT_027220	NT_011694	NT_011662
NT_011530	NT_025960	NT_030890	NT_011535	NT_011536	NT_030191	NT_011753	NT_011766
NT_025940	NT_030873	NT_025323	NT_025318	NT_030889	NT_011752	NT_011757	NT_011657
NT_011793	NT_011692	NT_025348	NT_011568	NT_033332	NT_033319	NT_011611	NT_011638
NT_033329	NT_027215	NT_025961	NT_011836	NT_011799	NT_011618	NT_028400	NT_025297
NT_011630	NT_029503	NT_011669	NT_029502	NT_019696	NT_033336	NT_033321	NT_011594
NT_025273	NT_033334	NT_031924	NT_011544	NT_011597	NT_011689	NT_025320	NT_025329
NT_025376	NT_025312	NT_025306	NT_011687	NT_025949	NT_033327	NT_025330	NT_027217
NT_033328	NT_011651	NT_027218	NT_011765	NT_025280	NT_025319	NT_025299	NT_011819
NT_011783	NT_033326	NT_011565	NT_025265	NT_028405	NT_028406	NT_011588	NT_011667
NT_011613	NT_011786	NT_025267	NT_011834	NT_011719	NT_028403	NT_029504	NT_011574
NT_026503	NT_011681	NT_011851	NT_011537	NT_019686	NT_026504	NT_025309	NT_011602
NT_033323	NT_033335	NT_033325	NT_033322	NT_011598	NT_011726	NT_029507	NT_033333
NT_011637	NT_025345	NT_033324	NT_025965	NT_025307

NT_011766

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_011766	AC079169	22511430	1	RH67681	1	125.20					2	AL356379,	AC079169, AL356379
S/G/Y/R/B/O	NT_011766	AC096509	22456657	1	RH58726	3	119.41			3	130.40	2	AC113168,	AC078780, AC096509, AC113168
S/G/Y/R/B/O	NT_011766	AC096509	22456661	1	RH47210	3	124.02					2	AC113168,	AC078780, AC096509, AC113168
S/G/Y/R/B/O	NT_011766	AC096509	22456719	1	RH1770			3	1343.00			2	AC113168,	AC078780, AC096509, AC113168
S/G/Y/R/B/O	NT_011766	AC096509	22456765	1	RH10953	3	124.02					2	AC113168,	AC078780, AC096509, AC113168
S/G/Y/R/B/O	NT_011766	AC096509	22456820	1	RH66925	3	116.16					2	AC113168,	AC078780, AC096509, AC113168
S/G/Y/R/B/O	NT_011766	AC079376	22663472	1	RH93924	X	100.43					1		AC079376
S/G/Y/R/B/O	NT_011766	AC002369	22567892	3
S/G/Y/R/B/O	NT_011766	AC002404	22769845	3	RH98610	X	100.43					1	AC079169,	AC002404, AC079169, U00241
S/G/Y/R/B/O	NT_011766	AC004552	22983870	3	AFM309VB1					X	20.00	1		AC073858, AC073909
S/G/Y/R/B/O	NT_011766	AC004656	23108235	3	RH45979	X	100.43					1		AC004656
S/G/Y/R/B/O	NT_011766	AC004656	23157511	3	RH17655	X	100.43					1		AC004656
S/G/Y/R/B/O	NT_011766	AC004656	23157617	3	RH63535	X	100.43			X	20.00	1	AC079168,	AC004656, AC079168
S/G/Y/R/B/O	NT_011766	AC004656	23164076	3	RH63557	X	100.43			X	18.20	1	AC079168,	AC004656, AC079168
S/G/Y/R/B/O	NT_011766	AC004656	23164153	3	RH67568	X	100.43					1	AC079168,	AC004656, AC079168
S/G/Y/R/B/O	NT_011766	AC004656	23164161	3	RH16353	X	100.43					1	AC079168,	AC004656, AC079168
S/G/Y/R/B/O	NT_011766	AC079168	23198677	3	RH103442	X	100.43					1		AC079168
S/G/Y/R/B/O	NT_011766	AC004655	23308753	3
S/G/Y/R/B/O	NT_011766	AC079375	23430505	1	RH63487	X	100.43			X	20.00	1		AC079375
S/G/Y/R/B/O	NT_011766	AC079375	23430564	1	RH35766	X	100.43					1		AC079375
S/G/Y/R/B/O	NT_011766		-		AFM268WH1					X	20.00	0