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  Chromosome X - RH Maps - Single Contig
 

Chromosome X - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_011651
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011651Z73497999620093RH93628X277.43    2AL034485, AL034485, Z73497
S/G/Y/R/B/O NT_011651Z74620999646483          
S/G/Y/R/B/O NT_011651Z822541000110143RH63358X276.22    1 Z82254
S/G/Y/R/B/O NT_011651Z822541000110143SGC33118    X236.401 Z82254
S/G/Y/R/B/O NT_011651Z822541000110573RH79967X275.40    1 Z82254
S/G/Y/R/B/O NT_011651Z822541000111583RH38780X277.43    1 Z82254
S/G/Y/R/B/O NT_011651AL1359591000138033RH63540X275.02  X271.601 AL135959
S/G/Y/R/B/O NT_011651AL1359591000138033RH69847X277.43    1 AL135959
S/G/Y/R/B/O NT_011651AL1359591000217133RH104213X275.02    1 AL135959
S/G/Y/R/B/O NT_011651AL0496311000869753RH101929X275.02    1 AL049631
S/G/Y/R/B/O NT_011651AL1218681001991323          
S/G/Y/R/B/O NT_011651AL1369771003173013          
S/G/Y/R/B/O NT_011651AL1333851003835783          
S/G/Y/R/B/O NT_011651AL1333811004293263          
S/G/Y/R/B/O NT_011651AL0504011004728033          
S/G/Y/R/B/O NT_011651AL1218661005849063          
S/G/Y/R/B/O NT_011651AL0218121006223513          
S/G/Y/R/B/O NT_011651AL0086421006674503          
S/G/Y/R/B/O NT_011651Z702241006678013          
S/G/Y/R/B/O NT_011651Z807741007264573RH63705X280.15    1 AL008714, Z80774
S/G/Y/R/B/O NT_011651Z807741007264573WI-15651    X271.201 AL008714, Z80774
S/G/Y/R/B/O NT_011651AL4422251007355313          
S/G/Y/R/B/O NT_011651Z697241007387733          
S/G/Y/R/B/O NT_011651Z953331007782233          
S/G/Y/R/B/O NT_011651AL5124451008032823          
S/G/Y/R/B/O NT_011651Z688721008409253          
S/G/Y/R/B/O NT_011651Z702321008774013          
S/G/Y/R/B/O NT_011651Z757451009114623          
S/G/Y/R/B/O NT_011651AL1332761009491073          
S/G/Y/R/B/O NT_011651Z711821010182923WI-4011    X271.101 Z71182
S/G/Y/R/B/O NT_011651Z700401010263513          
S/G/Y/R/B/O NT_011651Z759571010618313          
S/G/Y/R/B/O NT_011651Z744771011105823RH103718X294.21    1 Z74477
S/G/Y/R/B/O NT_011651Z811441011135103          
S/G/Y/R/B/O NT_011651Z697211011357973          
S/G/Y/R/B/O NT_011651Z757471011685773          
S/G/Y/R/B/O NT_011651AL3910701012075323          
S/G/Y/R/B/O NT_011651Z702251012189473          
S/G/Y/R/B/O NT_011651AL3910711012573083          
S/G/Y/R/B/O NT_011651Z746191013394873          
S/G/Y/R/B/O NT_011651AL0221681013767793          
S/G/Y/R/B/O NT_011651Z700511013922213          
S/G/Y/R/B/O NT_011651AL1332721014367973          
S/G/Y/R/B/O NT_011651Z693671014673393          
S/G/Y/R/B/O NT_011651Z997061015075063          
S/G/Y/R/B/O NT_011651Z739671015560773RH31533  X3181.00  1 AC022962
S/G/Y/R/B/O NT_011651Z683301015750253          
S/G/Y/R/B/O NT_011651Z689081016120793          
S/G/Y/R/B/O NT_011651Z683281016456453          
S/G/Y/R/B/O NT_011651AL1398131016899883          


  NT_011651 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011651Z702741017002343          
S/G/Y/R/B/O NT_011651Z973561017434073          
S/G/Y/R/B/O NT_011651Z697341017651533          
S/G/Y/R/B/O NT_011651Z683391018002843          
S/G/Y/R/B/O NT_011651Z838501018474783RH70201X281.12    1 AC026977, Z83850
S/G/Y/R/B/O NT_011651Z838501018475663RH63347X294.21X3181.00X271.101 AC026977, Z83850
S/G/Y/R/B/O NT_011651Z838501018480373RH33741  X3165.00  1 AC026977, Z83850
S/G/Y/R/B/O NT_011651Z838501019242883RH38727X280.60    1 L13470, X64171, Z83850
S/G/Y/R/B/O NT_011651Z838501019243133RH26385X280.60    1 L13470, X64171, Z83850
S/G/Y/R/B/O NT_011651AL5126611019332673          
S/G/Y/R/B/O NT_011651Z697221019725393          
S/G/Y/R/B/O NT_011651AL1359221020131533          
S/G/Y/R/B/O NT_011651Z682891020994863RH75141X281.28    1 Z68289
S/G/Y/R/B/O NT_011651AL1332711021125383          
S/G/Y/R/B/O NT_011651AL1398121022180893RH2659110254.60    2AC010864, AL590872, AL591116, Z97985, AC010864, AL139812, AL590872, AL591116, Z97985
S/G/Y/R/B/O NT_011651AL5903061023847323WI-10004    X271.701 AL590306
S/G/Y/R/B/O NT_011651AL6065151023996953          
S/G/Y/R/B/O NT_011651AL5908081024367123          
S/G/Y/R/B/O NT_011651AL6068331025368963          
S/G/Y/R/B/O NT_011651AL3913151026867623RH103289X280.81    1 AL391315, AL591467
S/G/Y/R/B/O NT_011651AL3913151026868683RH32623  X3724.00  1 AL391315, AL591467
S/G/Y/R/B/O NT_011651AL3913151026903413DXS6750    X271.101 AL391315, AL591467
S/G/Y/R/B/O NT_011651AL5918491027655793RH38705X281.54    1 AL591849
S/G/Y/R/B/O NT_011651AL5918491027900983RH63558X293.07  X269.801 AL591849
S/G/Y/R/B/O NT_011651AL1588211028292163RH25806X293.07    1 AL158821
S/G/Y/R/B/O NT_011651AL1588211028308143RH80420X282.16    1 AL158821
S/G/Y/R/B/O NT_011651AL1588211028309703RH93988X283.31    1 AL158821
S/G/Y/R/B/O NT_011651AL3900391029519323RH63522X282.69    1 AL390039
S/G/Y/R/B/O NT_011651AL3900391029519323RH32687  X3708.00X267.401 AL390039
S/G/Y/R/B/O NT_011651AL3900391029520503RH18436X283.00    1 AL390039
S/G/Y/R/B/O NT_011651AL3900391029544663RH17499X283.00    1 AC023366, AL390039
S/G/Y/R/B/O NT_011651AL3900391030122673RH45630X293.07    1 AC023366, AL390039
S/G/Y/R/B/O NT_011651AL3900391030217943RH44300X293.07    1 AC023366, AL390039
S/G/Y/R/B/O NT_011651AL1361121030851813          
S/G/Y/R/B/O NT_011651AC0040811031653453RH78899X287.52    1 J03069
S/G/Y/R/B/O NT_011651AL0350881032942373          
S/G/Y/R/B/O NT_011651AL1377871034931913RH38803X283.24    1 AL137787
S/G/Y/R/B/O NT_011651 - RH36177X283.24    0