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  Chromosome X - RH Maps - Single Contig
 

Chromosome X - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_011754
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011754AL355923151974842          
S/G/Y/R/B/O NT_011754AC025239151979191          
S/G/Y/R/B/O NT_011754AC023037180220401WI-4686    X19.901AC003659, AC003659, AC023037
S/G/Y/R/B/O NT_011754AC073617153164803CHLC.GATA52B03    X9.901AL355923, AC073617, AL355923
S/G/Y/R/B/O NT_011754AC074035153705313          
S/G/Y/R/B/O NT_011754AC108683155272413          
S/G/Y/R/B/O NT_011754AC079264155866153          
S/G/Y/R/B/O NT_011754AC112917158495713RH74400X74.75    2 AC073494
S/G/Y/R/B/O NT_011754AC005297159136643          
S/G/Y/R/B/O NT_011754AC073614162029073DXS1202    X20.001 AC073614
S/G/Y/R/B/O NT_011754AC079178162189113          
S/G/Y/R/B/O NT_011754AC005345164521693RH920  X286.00  1 AC005345
S/G/Y/R/B/O NT_011754AC005345164521693RH15666X102.75    1 AC005345
S/G/Y/R/B/O NT_011754AC107293164917023          
S/G/Y/R/B/O NT_011754AC022356167171751CHLC.ATC2B09    X20.001 AC022356
S/G/Y/R/B/O NT_011754AC012687167201541          
S/G/Y/R/B/O NT_011754AC112493167209423          
S/G/Y/R/B/O NT_011754AC097262168493651          
S/G/Y/R/B/O NT_011754AC017025168527251          
S/G/Y/R/B/O NT_011754AC113222169624651          
S/G/Y/R/B/O NT_011754AC084351169884971WI-13308    X9.901 AC084351
S/G/Y/R/B/O NT_011754AC084351169884971RH63380X80.62    1 AC084351
S/G/Y/R/B/O NT_011754AC084351170967311RH36507X80.62    1AC112651, AC084351, AC112651
S/G/Y/R/B/O NT_011754AC112651170326361RH66689X80.62    1AC084351, AC084351, AC112651
S/G/Y/R/B/O NT_011754AC112651170900481WI-14685    X12.701AC084351, AC084351, AC112651, M23556
S/G/Y/R/B/O NT_011754AC112651170900481RH63588X80.62    1AC084351, AC084351, AC112651, M23556
S/G/Y/R/B/O NT_011754AC112651170912241RH38774X80.62    1AC084351, AC084351, AC112651, M23556
S/G/Y/R/B/O NT_011754AC112651170912291RH75812X80.62    1AC084351, AC084351, AC112651, M23556
S/G/Y/R/B/O NT_011754AC112651170923951WI-9247    X12.701AC084351, AC084351, AC112651, M23556
S/G/Y/R/B/O NT_011754AC112651170923951RH63640X80.62    1AC084351, AC084351, AC112651, M23556
S/G/Y/R/B/O NT_011754AC112651170925161RH38730X80.62    1AC084351, AC084351, AC112651, M23556
S/G/Y/R/B/O NT_011754AC005704171783923          
S/G/Y/R/B/O NT_011754AC073583172538093WI-5803    X12.701AC005704, AC005704, AC073583, AC112652
S/G/Y/R/B/O NT_011754AC073583173800253RH38708X80.62    1 AC073583, AC112652
S/G/Y/R/B/O NT_011754AC073583173928833RH35753X80.62    1 AC073583, AC112652
S/G/Y/R/B/O NT_011754AC073583173937163RH68074X80.62    1 AC073583, AC112652
S/G/Y/R/B/O NT_011754AC107419175324503WI-17182    X20.001AC113222, AC107419, AC113222
S/G/Y/R/B/O NT_011754AC107419175324503RH63559X102.75    1AC113222, AC107419, AC113222
S/G/Y/R/B/O NT_011754AC006210176128343DXS1061    X20.001 AC006210
S/G/Y/R/B/O NT_011754AC006210176128343RH712  X330.00  1 AC006210
S/G/Y/R/B/O NT_011754AC006210176128343RH37072X102.75    1 AC006210
S/G/Y/R/B/O NT_011754AC079902177912543          
S/G/Y/R/B/O NT_011754AC025065178806361          
S/G/Y/R/B/O NT_011754AC107613178968011          
S/G/Y/R/B/O NT_011754AC003659180423051          
S/G/Y/R/B/O NT_011754AC003667180744913          
S/G/Y/R/B/O NT_011754AC112916183490463AFM318ZC1    X18.401 AC112916
S/G/Y/R/B/O NT_011754AC004553184169243AFMA083WD1    X20.001AC021710, AC112492, AC004553, AC021710, AC112492
S/G/Y/R/B/O NT_011754AC021710186798331RH31522  X320.00  1AC112492, AC021710, AC112492
S/G/Y/R/B/O NT_011754AC018862185894891RH48603X104.65    1AC011693, AC107613, AC011693, AC018862, AC107613


  NT_011754 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011754AC011693185276651RH102087X102.75    1AC018862, AC107613, AC011693, AC018862, AC107613
S/G/Y/R/B/O NT_011754AC112492186830551          
S/G/Y/R/B/O NT_011754 - WI-9934    X5.601U73508, U73508
S/G/Y/R/B/O NT_011754 - SGC31598    X6.101AC003036, AC022082, AC003036, AC022082, AC024217
S/G/Y/R/B/O NT_011754 - SGC34710    X6.101AC002366, AC002366, AL357130
S/G/Y/R/B/O NT_011754 - TIGR-A004U24    X6.101AC003666, AC003666
S/G/Y/R/B/O NT_011754 - WI-17390    X6.101AC002365, AC002365
S/G/Y/R/B/O NT_011754 - WI-1819    X7.101AC025563, AC025563
S/G/Y/R/B/O NT_011754 - RH2086  X206.00X7.301AC078993, AC078993
S/G/Y/R/B/O NT_011754 - RH31516  X211.00  1AC017058, AC017058
S/G/Y/R/B/O NT_011754 - WI-5123    X7.401AC003669, AC058807, AC097625, AC003669, AC058807, AC097625
S/G/Y/R/B/O NT_011754 - RH32747  X270.00X7.400  
S/G/Y/R/B/O NT_011754 - SGC30326    X7.701AC003036, AC022082, AC003036, AC022082, AC024217
S/G/Y/R/B/O NT_011754 - DXS1043    X7.701 AC027598
S/G/Y/R/B/O NT_011754 - WI-12892    X7.701AC008008, AC008008
S/G/Y/R/B/O NT_011754 - WI-5813    X7.701AC008008, AC008008
S/G/Y/R/B/O NT_011754 - AFMA040YD5    X7.801AC003666, AC003666
S/G/Y/R/B/O NT_011754 - WI-3796    X9.201AC003684, AC003684
S/G/Y/R/B/O NT_011754 - WI-5636    X9.301AC005859, AC005859, AC076973
S/G/Y/R/B/O NT_011754 - WI-9953    X9.301AC025298, AC112499, AC025298, AC112499
S/G/Y/R/B/O NT_011754 - WI-2992    X9.401AC002366, AC002366, AC027598
S/G/Y/R/B/O NT_011754 - DXS1060    X9.901AC074045, AC074045
S/G/Y/R/B/O NT_011754 - WI-3094    X9.901AC017047, AC017047
S/G/Y/R/B/O NT_011754 - WI-5439    X11.401AC019328, AC112654, AC019328, AC112654
S/G/Y/R/B/O NT_011754 - DXS6746    X11.501AC095353, AC095353
S/G/Y/R/B/O NT_011754 - DXS1223    X12.701AC073533, AC073533
S/G/Y/R/B/O NT_011754 - WI-4757    X14.001AC005184, AC005184
S/G/Y/R/B/O NT_011754 - DXS1053    X16.101AC058807, AC097625, AC058807, AC097625
S/G/Y/R/B/O NT_011754 - DXS1195    X16.101Z93022, Z93022