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  Chromosome X - RH Maps - Single Contig
 

Chromosome X - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_011568
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011568AL591491422864603          
S/G/Y/R/B/O NT_011568AL590364424411673RH74398X133.60    1 AL590364
S/G/Y/R/B/O NT_011568AL020989424718243          
S/G/Y/R/B/O NT_011568AL139810426128563          
S/G/Y/R/B/O NT_011568AL157701426441743RH1032572567.49    2AC018712, AC018712, AL157701
S/G/Y/R/B/O NT_011568AL391134427329633          
S/G/Y/R/B/O NT_011568AL034412428609453RH36604X133.30    1 AL034412, Z69732
S/G/Y/R/B/O NT_011568AL034412428780113RH48050X114.82    1 AL034412, Z69732
S/G/Y/R/B/O NT_011568AL031584429209653RH10281X133.19    1 AL031584
S/G/Y/R/B/O NT_011568AL031584429678393RH65469X133.19    1 AL031584
S/G/Y/R/B/O NT_011568AL031585430616773          
S/G/Y/R/B/O NT_011568AL139402431468813          
S/G/Y/R/B/O NT_011568AL034410431741793RH789272028.85    2AL121924, AC016073, AL034410, AL121924, J04718
S/G/Y/R/B/O NT_011568AL034410431743763RH38729X135.51    2AL121924, AC016073, AL034410, AL121924, J04718
S/G/Y/R/B/O NT_011568AL390917433126613          
S/G/Y/R/B/O NT_011568AL034402433328793          
S/G/Y/R/B/O NT_011568AL139811435340653RH67827X113.64    1 AL139811
S/G/Y/R/B/O NT_011568AL139811435795863RH102572X135.26    1 AL139811
S/G/Y/R/B/O NT_011568AL139811435880393RH38750X136.01    1 AL139811
S/G/Y/R/B/O NT_011568AL139811435889853RH47775X134.65    1 AL139811
S/G/Y/R/B/O NT_011568AL031393435958853          
S/G/Y/R/B/O NT_011568AL022165437139493RH103859X136.54    1 AL022165
S/G/Y/R/B/O NT_011568AL022165437149563RH63396X136.54  X53.601 AL022165
S/G/Y/R/B/O NT_011568AL022165437151353RH25706X137.93    1 AL022165
S/G/Y/R/B/O NT_011568AL022165437153423RH35778X137.51    1 AL022165
S/G/Y/R/B/O NT_011568AL022165437164403RH18372X137.83    1 AL022165
S/G/Y/R/B/O NT_011568AL162583438107963          
S/G/Y/R/B/O NT_011568AL512633438248953          
S/G/Y/R/B/O NT_011568AL050307438661513          
S/G/Y/R/B/O NT_011568AL627143439875533          
S/G/Y/R/B/O NT_011568Z83822441470063RH92012X138.25    1 Z83822
S/G/Y/R/B/O NT_011568Z83822441539683RH63571X137.29  X55.001 Z83822
S/G/Y/R/B/O NT_011568Z83822441539683RH32735  X1090.00  1 Z83822
S/G/Y/R/B/O NT_011568Z83822441764843RH63554X138.25    1 Z83822
S/G/Y/R/B/O NT_011568Z83822441764843WI-14908    X71.901 Z83822
S/G/Y/R/B/O NT_011568AL513366442087603RH12606X138.25    1 AL513366
S/G/Y/R/B/O NT_011568AL513366443023243RH77753X138.25    1 AL513366
S/G/Y/R/B/O NT_011568AL513366443178723RH48434X137.29    1 AL513366
S/G/Y/R/B/O NT_011568AL513366443198433RH63617X137.29  X53.501 AL513366
S/G/Y/R/B/O NT_011568AL513366443210673RH35768X137.29    1 AL513366
S/G/Y/R/B/O NT_011568AL513366443304763RH18112X138.25    1 AL513366
S/G/Y/R/B/O NT_011568AL096791443442703RH71290X137.29    1 AL096791
S/G/Y/R/B/O NT_011568AL096791443444283RH35770X138.25    1 AL096791
S/G/Y/R/B/O NT_011568AL096791443633303RH15939X137.29    1 AL096791
S/G/Y/R/B/O NT_011568AL096791443637153RH35861X139.00    1 AL096791
S/G/Y/R/B/O NT_011568AL591503443878233RH250223158.68    2AC087503, AC104452, AC087503, AC104452
S/G/Y/R/B/O NT_011568AL590223445293003RH76312X139.21    1 AL590223
S/G/Y/R/B/O NT_011568AL590223445300523RH63353X137.29  X53.501 AL590223
S/G/Y/R/B/O NT_011568AL590223445301543RH66336X136.69    1 AL590223
S/G/Y/R/B/O NT_011568AL590223445387403RH63657X137.40  X54.601 AL590223


  NT_011568 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011568AL590223445605613RH63516X137.29  X54.701 AL590223
S/G/Y/R/B/O NT_011568AL590223445605913RH46420X137.40    1  
S/G/Y/R/B/O NT_011568AL590223445639833RH8926  X1112.00  1AL590283, AL590223, AL590283
S/G/Y/R/B/O NT_011568AL590283445660633          
S/G/Y/R/B/O NT_011568Z84466446760103RH79745X137.93    1 L24038, U01337, Z84466
S/G/Y/R/B/O NT_011568Z84466446870943RH38726X139.21    1 L24038, U01337, Z84466
S/G/Y/R/B/O NT_011568Z84466446871283RH63408X142.51    1 L24038, U01337
S/G/Y/R/B/O NT_011568Z84466446871283WI-6972    X73.601 L24038, U01337
S/G/Y/R/B/O NT_011568Z84466446872033RH63528X140.98    1 L24038, U01337, Z84466
S/G/Y/R/B/O NT_011568Z84466446872033SGC30176    X73.801 L24038, U01337, Z84466
S/G/Y/R/B/O NT_011568Z84466446876533RH79877X140.87    1 L24038, U01337, Z84466
S/G/Y/R/B/O NT_011568Z84466446876893RH93525X142.73    1 L24038, U01337, Z84466
S/G/Y/R/B/O NT_011568Z84466446883963RH76226X141.58    1 L24038, U01337, Z84466
S/G/Y/R/B/O NT_011568Z84466446886493RH38725X141.19    1 L24038, U01337, Z84466
S/G/Y/R/B/O NT_011568Z84466447022733RH74969X135.36    1 D11139, Z84466
S/G/Y/R/B/O NT_011568AL009172447453003RH93309X143.34    1 AF005664, AF005665, AF005666, AF005667, AL009172, AL157383, X70872
S/G/Y/R/B/O NT_011568AL009172447675803RH18409X142.73    1 AB016194, AL009172, AL157383
S/G/Y/R/B/O NT_011568AL031967448761503          
S/G/Y/R/B/O NT_011568AL022578448762463          
S/G/Y/R/B/O NT_011568AL591394449807433          
S/G/Y/R/B/O NT_011568Z98304450319853RH65534X142.73    1 Z98304
S/G/Y/R/B/O NT_011568Z98304450321203RH66794X142.73    1 Z98304
S/G/Y/R/B/O NT_011568Z98304450330633RH63618X143.34    1 Z98304
S/G/Y/R/B/O NT_011568Z98304450330633RH38161  X1074.00X71.701 Z98304
S/G/Y/R/B/O NT_011568Z98304450331953RH16348X143.34    1 Z98304
S/G/Y/R/B/O NT_011568Z98304450376803RH38754X142.73    1 Z98304
S/G/Y/R/B/O NT_011568Z98304450912083RH8890  X1151.00  1 AL356797, Z98304
S/G/Y/R/B/O NT_011568AL356464452328023          
S/G/Y/R/B/O NT_011568 - RH12608X138.25    1AP000722, AP000722, AP001154
S/G/Y/R/B/O NT_011568 - WI-9558    X54.801AC115618, AF196969, AC115618, AF149817, AF196969
S/G/Y/R/B/O NT_011568 - RH16777X134.02    0  
S/G/Y/R/B/O NT_011568 - WI-5339    X59.901AL359272, AL359272
S/G/Y/R/B/O NT_011568 - RH35955X136.97    0Z83822, Z83822
S/G/Y/R/B/O NT_011568 - RH9895X137.83    0AL022165, AL022165