Chromosome X - RH Maps - Single Contig

Chromosome X - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_028427	NT_028413	NT_033330	NT_025302	NT_011735	NT_029505	NT_030875	NT_011649
NT_025291	NT_030874	NT_030885	NT_011812	NT_011832	NT_030887	NT_011775	NT_011772
NT_033338	NT_025352	NT_011724	NT_011586	NT_011754	NT_027220	NT_011694	NT_011662
NT_011530	NT_025960	NT_030890	NT_011535	NT_011536	NT_030191	NT_011753	NT_011766
NT_025940	NT_030873	NT_025323	NT_025318	NT_030889	NT_011752	NT_011757	NT_011657
NT_011793	NT_011692	NT_025348	NT_011568	NT_033332	NT_033319	NT_011611	NT_011638
NT_033329	NT_027215	NT_025961	NT_011836	NT_011799	NT_011618	NT_028400	NT_025297
NT_011630	NT_029503	NT_011669	NT_029502	NT_019696	NT_033336	NT_033321	NT_011594
NT_025273	NT_033334	NT_031924	NT_011544	NT_011597	NT_011689	NT_025320	NT_025329
NT_025376	NT_025312	NT_025306	NT_011687	NT_025949	NT_033327	NT_025330	NT_027217
NT_033328	NT_011651	NT_027218	NT_011765	NT_025280	NT_025319	NT_025299	NT_011819
NT_011783	NT_033326	NT_011565	NT_025265	NT_028405	NT_028406	NT_011588	NT_011667
NT_011613	NT_011786	NT_025267	NT_011834	NT_011719	NT_028403	NT_029504	NT_011574
NT_026503	NT_011681	NT_011851	NT_011537	NT_019686	NT_026504	NT_025309	NT_011602
NT_033323	NT_033335	NT_033325	NT_033322	NT_011598	NT_011726	NT_029507	NT_033333
NT_011637	NT_025345	NT_033324	NT_025965	NT_025307

NT_030887

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_030887	AC080176	9272778	1
S/G/Y/R/B/O	NT_030887	AC004554	9408572	3	RH77758	X	83.98					1	AC080176,	AC004554, AC080176
S/G/Y/R/B/O	NT_030887	AC004554	9416071	3	SGC32403					X	2.50	2	AC080176,	AC004554, AC080176
S/G/Y/R/B/O	NT_030887	AC004554	9416071	3	RH32388			X	5.00			2	AC080176,	AC004554, AC080176
S/G/Y/R/B/O	NT_030887	AC073613	9470106	3
S/G/Y/R/B/O	NT_030887	AC002980	9566304	3
S/G/Y/R/B/O	NT_030887	AC073524	9705773	3
S/G/Y/R/B/O	NT_030887	AC002981	9797486	3	RH8925			X	0.00			1		AC002981
S/G/Y/R/B/O	NT_030887	AC002981	9797645	3	RH27926	X	85.38					1		AC002981
S/G/Y/R/B/O	NT_030887	AC002981	9843896	3	RH77767	X	83.98					1		AC002981
S/G/Y/R/B/O	NT_030887	AC002981	9845622	3	RH77749	X	83.98					1		AC002981
S/G/Y/R/B/O	NT_030887	AC112657	9913492	3
S/G/Y/R/B/O	NT_030887	AC025298	10053489	1	RH47776	X	85.38					1	AC112499,	AC025298, AC112499
S/G/Y/R/B/O	NT_030887	AC025298	10098897	1	WI-9953					X	9.30	1	AC112499,	AC025298, AC112499
S/G/Y/R/B/O	NT_030887	AC112499	10033120	1
S/G/Y/R/B/O	NT_030887	AC012577	10161804	1
S/G/Y/R/B/O	NT_030887	AC112655	10285825	1	RH36808	X	85.40					1	AC005859,	AC005859, AC112655
S/G/Y/R/B/O	NT_030887	AC005859	10385466	3	RH12477	X	85.40					1		AC005859, AC076973
S/G/Y/R/B/O	NT_030887	AC005859	10385790	3	RH92723	X	83.98					1		AC005859, AC076973
S/G/Y/R/B/O	NT_030887	AC005859	10392297	3	WI-5636					X	9.30	1		AC005859, AC076973
S/G/Y/R/B/O	NT_030887	AC005859	10451646	3	RH38749	X	85.40					2	AC003046, AC023098,	AC003046, AC005859, AC023098, AC076973
S/G/Y/R/B/O	NT_030887	AC005859	10484432	3	RH93995	X	85.40					1	AC023098,	AC023098
S/G/Y/R/B/O	NT_030887	AC023098	10497910	1	RH91868	X	85.48					1
S/G/Y/R/B/O	NT_030887	AC003046	10535145	3	RH38749	X	85.40					2	AC005859, AC023098,	AC003046, AC005859, AC023098, AC076973
S/G/Y/R/B/O	NT_030887	AC079171	10677904	3
S/G/Y/R/B/O	NT_030887	AC004674	10764345	3	DXS1224					X	7.80	1		AC004674
S/G/Y/R/B/O	NT_030887	AC004674	10815596	3	AFMB300XC5					X	7.70	1		AC004674
S/G/Y/R/B/O	NT_030887	AC004674	10902710	3	WI-10833					X	7.70	1		AC004674
S/G/Y/R/B/O	NT_030887		-		RH38688	X	85.38					0	AC003666,	AC003666
S/G/Y/R/B/O	NT_030887		-		SGC32388					X	3.40	1	AC093625,	AC093625