Home    Genome Browser    BLAT Search    Help
  Chromosome X - RH Maps - Single Contig
 

Chromosome X - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_011574
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011574AC0250961360366491          
S/G/Y/R/B/O NT_011574AL0786391360896473RH63555X324.88  X299.501 AL078639
S/G/Y/R/B/O NT_011574AL0786391360979963RH38731X324.88    1 AL078639, M31423
S/G/Y/R/B/O NT_011574AL0786391360979993RH63306X324.88  X299.501 AL078639, M31423
S/G/Y/R/B/O NT_011574AL0786391360987103RH63298X324.88X4259.00X299.501 AL078639, M31423
S/G/Y/R/B/O NT_011574AL3593931361718433          
S/G/Y/R/B/O NT_011574AL4510481362188971          
S/G/Y/R/B/O NT_011574Z989501363936983          
S/G/Y/R/B/O NT_011574AL1097991365014673RH12597X324.88    1 AL109799
S/G/Y/R/B/O NT_011574AL1097991365874353RH103383X304.92    2AC025096, AL035423, AC025096, AL035423, AL109799
S/G/Y/R/B/O NT_011574AL1332731366256223          
S/G/Y/R/B/O NT_011574AL0503081366678973          
S/G/Y/R/B/O NT_011574AL1218811368808813          
S/G/Y/R/B/O NT_011574Z957031370347963RH42553X324.88  X297.901AL121881, AL121881, Z95703
S/G/Y/R/B/O NT_011574AL1098521370615513          
S/G/Y/R/B/O NT_011574AL0491771371237183          
S/G/Y/R/B/O NT_011574AL0232791371755363          
S/G/Y/R/B/O NT_011574AL0221521372608933DXS6751    X299.501 AL022152
S/G/Y/R/B/O NT_011574AL0498581373375903          
S/G/Y/R/B/O NT_011574AL0237731373945393          
S/G/Y/R/B/O NT_011574AL0310731375228343RH99306X324.88    1 AF116195, AF196483, AF239802, AL031073
S/G/Y/R/B/O NT_011574AL1096201376522213          
S/G/Y/R/B/O NT_011574AL0315861378632543CHLC.GATA12C10    X302.901 AL031586
S/G/Y/R/B/O NT_011574AL0802721378815693          
S/G/Y/R/B/O NT_011574AL4492651379770323          
S/G/Y/R/B/O NT_011574AL0310541381525263WI-988    X296.501 AL031054
S/G/Y/R/B/O NT_011574AL1378401383011303          
S/G/Y/R/B/O NT_011574AL0227201384164483RH63393X328.24  X296.501 AL022720
S/G/Y/R/B/O NT_011574AL0802381385314803          
S/G/Y/R/B/O NT_011574AL0227191385783873          
S/G/Y/R/B/O NT_011574AL0309971387298063          
S/G/Y/R/B/O NT_011574AL0802391388364423WI-4468    X296.501 AL080239
S/G/Y/R/B/O NT_011574AL0802391389430663RH15938X330.79    1 AL080239
S/G/Y/R/B/O NT_011574AL5005221390464463          
S/G/Y/R/B/O NT_011574AL1096221391735393CHLC.GATA100G03    X295.001 AL109622
S/G/Y/R/B/O NT_011574AL1096221392000993RH8077412362.04    3AC023054, AC025260, AC090050, AC108064, AC021644, AC023054, AC025260, AC034128, AC090050, AC108064, AL109622
S/G/Y/R/B/O NT_011574AL1359201392517503          
S/G/Y/R/B/O NT_011574AL5904241393245533          
S/G/Y/R/B/O NT_011574AL0313121393370793          
S/G/Y/R/B/O NT_011574AL1389691394229833          
S/G/Y/R/B/O NT_011574AL3598841395675413          
S/G/Y/R/B/O NT_011574AL0495881395915213WI-5720    X295.002AC080095, AC080095, AL049588
S/G/Y/R/B/O NT_011574AL0495881396774943WI-4083    X295.001 AL049588
S/G/Y/R/B/O NT_011574 - RH77692X326.61    0  
S/G/Y/R/B/O NT_011574 - WI-5135    X295.001AL139112, AL139112, AL356366
S/G/Y/R/B/O NT_011574 - AFMA113ZF5    X296.501AC019230, AC019230, AL391135
S/G/Y/R/B/O NT_011574 - WI-5373    X299.501AL121875, AL121875, U09822
S/G/Y/R/B/O NT_011574 - WI-6425    X299.501AL137016, AL137016
S/G/Y/R/B/O NT_011574 - WI-11452    X300.001 AC023448
S/G/Y/R/B/O NT_011574 - WI-4535    X300.001AL008713, AL008713


  NT_011574 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011574 - WI-14785    X300.001AL033403, AL033403
S/G/Y/R/B/O NT_011574 - WI-19784    X301.201AL031386, AL031386
S/G/Y/R/B/O NT_011574 - WI-3482    X301.201AL035443, AL035443, AL391317, Z96804
S/G/Y/R/B/O NT_011574 - WI-11365    X301.701AC022220, AL683813, AC022220, AL683813
S/G/Y/R/B/O NT_011574 - WI-11212    X302.102AL590282, AL591381, AL590282, AL591381
S/G/Y/R/B/O NT_011574 - WI-18109    X302.101AL078638, AL078638, AL670274
S/G/Y/R/B/O NT_011574 - SGC32894    X302.101AC004383, AC004387, AC004383, AC004387, AL590875
S/G/Y/R/B/O NT_011574 - SGC31168    X302.101AL078638, AL078638
S/G/Y/R/B/O NT_011574 - WI-1333    X302.901AL078638, AL078638, AL670274
S/G/Y/R/B/O NT_011574 - WI-3908    X302.901AL450472, AL450472
S/G/Y/R/B/O NT_011574 - SGC30410    X302.901AL135783, AL135783
S/G/Y/R/B/O NT_011574 - WI-6213    X302.901AL078638, AL078638, AL670274
S/G/Y/R/B/O NT_011574 - TIGR-A002L20    X302.901AL136169, AL136169