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  Chromosome 2 - RH Maps - Single Contig
 

Chromosome 2 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_029235
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_029235AC080095912739881WI-5720    X295.002AL049588, AC080095, AL049588
S/G/Y/R/B/O NT_029235AC083899909052503RH653522320.23    2AC093166, AC069171, AC083899, AC093166
S/G/Y/R/B/O NT_029235AC092651909470573          
S/G/Y/R/B/O NT_029235AC093616911267681RH33515  24113.00  1AC064810, AC064810, AC093616
S/G/Y/R/B/O NT_029235AC093616911271531RH569232312.83  2390.002AC064810, AC064810, AC093616
S/G/Y/R/B/O NT_029235AC064810910770941          
S/G/Y/R/B/O NT_029235AC109354911472941RH263692318.23    4AC009963, AC010893, AC064810, AC093616, AC097527, AC114755, AC009963, AC010893, AC064810, AC093616, AC097527, AC109354, AC111200, AC114755
S/G/Y/R/B/O NT_029235AC109354911629681RH703652391.78    4AC012487, AC013271, AC064810, AC093616, AC112246, AC012487, AC013271, AC064810, AC083903, AC093616, AC108938, AC109354, AC109815, AC111200, AC112246, AC114781
S/G/Y/R/B/O NT_029235AC109354911830641RH1028572409.01    3AC013271, AC064810, AC093616, AC112246, AC013271, AC064810, AC093616, AC108938, AC109354, AC109815, AC111200, AC112246, AC114781
S/G/Y/R/B/O NT_029235AC108479914142361RH177942320.23    3AC013819, AC112246, AC112696, AC115115, AC013819, AC108479, AC111200, AC112246, AC112696, AC114781, AC115115
S/G/Y/R/B/O NT_029235AC108479914167871RH566372228.94  2322.103AC005041, AC013819, AC112696, AC005041, AC013819, AC108479, AC111200, AC112696
S/G/Y/R/B/O NT_029235AC108479914169031RH74556  24133.00  3AC005041, AC112696, AC005041, AC108479, AC111200, AC112696
S/G/Y/R/B/O NT_029235AC108479914775201RH657562308.02    1AC013819, AC013819, AC108479
S/G/Y/R/B/O NT_029235AC108479915022961RH680312308.02    1AC013819, AC013819, AC108479
S/G/Y/R/B/O NT_029235AC108479915031491RH707642308.02    1AC013819, AC013819, AC108479
S/G/Y/R/B/O NT_029235AC108479915032341RH360992308.02    1AC013819, AC013819, AC108479
S/G/Y/R/B/O NT_029235AC013819914655711          
S/G/Y/R/B/O NT_029235AC092836915608813RH155482308.02    1AC013819, AC013819
S/G/Y/R/B/O NT_029235AC092836915614533RH926702308.02    1AC013819, AC013819, AC092836
S/G/Y/R/B/O NT_029235AC092836915752583RH703512308.02    1AC013819, AC013819, AC092836
S/G/Y/R/B/O NT_029235AC092836916277213RH1034472317.92    1 AC092836
S/G/Y/R/B/O NT_029235AC092836916370473RH562172308.02  2392.201 AC092836
S/G/Y/R/B/O NT_029235AC092836916372333RH475802319.44    1 AC092836
S/G/Y/R/B/O NT_029235AC104081916813443          
S/G/Y/R/B/O NT_029235AC012671918275853RH30750  24423.00  1 AC012671
S/G/Y/R/B/O NT_029235AC104134920073423RH911822316.80    2AL390119, AC104134, AL390119
S/G/Y/R/B/O NT_029235AC104134920177633RH1042592308.02    1 AC104134
S/G/Y/R/B/O NT_029235AC062029920820563RH125072309.84    1 AC062029
S/G/Y/R/B/O NT_029235AC062029921755443RH109952312.09    1 AC062029
S/G/Y/R/B/O NT_029235AC096579922005643RH451442309.84    1 AC096579
S/G/Y/R/B/O NT_029235AC096579922010013RH693692309.84    1 AC096579
S/G/Y/R/B/O NT_029235AC096579922011443RH988742309.84    1 AC096579
S/G/Y/R/B/O NT_029235AC096579922479823RH562312309.84  2393.001 AC096579
S/G/Y/R/B/O NT_029235AC096579923076833RH703492309.84    1 AC104601, AF017732, AF178581, AP001215, X67858
S/G/Y/R/B/O NT_029235AC096579923111543RH683192309.84    1 AC096579, AC104601, AF017732, AF178581, AP001215, NG_000834, X67858
S/G/Y/R/B/O NT_029235AC096767923530513          
S/G/Y/R/B/O NT_029235 - RH1040632314.75    0AC009958, AC110080, AC009958, AC110080, AP001224, AP001226, NG_000833, NG_000834
S/G/Y/R/B/O NT_029235 - RH128792320.23    1AC017002, AC017002
S/G/Y/R/B/O NT_029235 - RH250892316.68    3AC064848, AC112696, AC006571, AC064848, AC112696
S/G/Y/R/B/O NT_029235 - RH263232317.11    0AC009963, AC012487, AC013271, AC064810, AC093616, AC097527, AC109354, AC112246, AC114755, AC115115, AC009963, AC012487, AC013271, AC013464, AC064810, AC083903, AC093616, AC097527, AC108938, AC109354, AC109815, AC111200, AC112246, AC114755, AC114781, AC115115
S/G/Y/R/B/O NT_029235 - RH264302317.57    2AC064848, AC112696, AC064848, AC112696
S/G/Y/R/B/O NT_029235 - RH364112317.22    1AC009309, AC009309
S/G/Y/R/B/O NT_029235 - RH443482320.23    1AC017002, AC017002
S/G/Y/R/B/O NT_029235 - RH570012315.69    1AC068288, AC012419, AC068288
S/G/Y/R/B/O NT_029235 - RH570722318.66    2AC016753, AC096715, AC016753, AC096715
S/G/Y/R/B/O NT_029235 - RH667972314.75    0AC068279, AC073416, AC096767, AC113612, AP001243, AC068279, AC073416, AC096767, AC104601, AC113612, AP001213, AP001228, AP001230, AP001243, NG_000833, NG_000833, NG_000834, NG_000834
S/G/Y/R/B/O NT_029235 - RH924862317.03    1AC068288, AC068288
S/G/Y/R/B/O NT_029235 - RH934562320.23    1AC093166, AC069171, AC093166
S/G/Y/R/B/O NT_029235 - RH987772317.03    1AC068288, AC012419, AC068288
S/G/Y/R/B/O NT_029235 - RH991362320.23    1AC017002, AC017002