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  Chromosome 2 - RH Maps - Single Contig
 

Chromosome 2 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005322
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005322AC012494817941363          
S/G/Y/R/B/O NT_005322AC073485820271563CHLC.GATA72H01    2332.702AC019332, AC019332, AC073485
S/G/Y/R/B/O NT_005322AC064872821538413D2S169    2344.302AC019332, AC019332, AC064872
S/G/Y/R/B/O NT_005322AC064872821538413RH49222244.09    2AC019332, AC019332, AC064872
S/G/Y/R/B/O NT_005322AC064872821538413RH889  23263.00  2AC019332, AC019332, AC064872
S/G/Y/R/B/O NT_005322AC092660822421703          
S/G/Y/R/B/O NT_005322AC018887823948743          
S/G/Y/R/B/O NT_005322AC069162825823403          
S/G/Y/R/B/O NT_005322AC092604826251463          
S/G/Y/R/B/O NT_005322AC017004828189393RH702622264.70    2AC011993, AC011993, AC017004, D17291, L08010
S/G/Y/R/B/O NT_005322AC017004828571113RH689772267.82    2AC011993, AC011993, AC017004, J05412
S/G/Y/R/B/O NT_005322AC069387828901733RH690182264.70    2AC011993, AC011993, AC069387, L15533
S/G/Y/R/B/O NT_005322AC069387828908673RH2091  23284.00  2AC011993, AC011993, AC069387, L15533
S/G/Y/R/B/O NT_005322AC011754829045463          
S/G/Y/R/B/O NT_005322AC018733830655623WI-4743    2335.401 AC018733
S/G/Y/R/B/O NT_005322AC010975832430233RH1039202247.36    1 AC010975
S/G/Y/R/B/O NT_005322AC010975832702623RH46062258.95  2335.301 AC010975
S/G/Y/R/B/O NT_005322AC010975832702623RH1132  23292.00  1 AC010975
S/G/Y/R/B/O NT_005322AC096573834634803RH284122240.34    1 AC096573
S/G/Y/R/B/O NT_005322AC096753834750033          
S/G/Y/R/B/O NT_005322AC093322835756233          
S/G/Y/R/B/O NT_005322AC011746837211143RH1295  23314.00  1 AC011746, AC023348
S/G/Y/R/B/O NT_005322AC011746837212113RH369282248.68    1 AC011746, AC023348
S/G/Y/R/B/O NT_005322AC011746837326883RH480712265.02    1 AC011746, AC023348
S/G/Y/R/B/O NT_005322AC016716837366933GCT1B4    2328.701 AC016716, AC023348
S/G/Y/R/B/O NT_005322AC016716837642243RH1022502266.87    1 AC016716, AC023348
S/G/Y/R/B/O NT_005322AC016716839337843RH565522263.03  2335.501 AC016030, AC016716
S/G/Y/R/B/O NT_005322AC016670840127273RH31625  23327.00  1 AC016670, AC018534
S/G/Y/R/B/O NT_005322AC016670840213823RH479212259.15    1 AC016030, AC016670, AC018534
S/G/Y/R/B/O NT_005322AC104780841076733RH571162261.38  2335.401 AC016239, AC018534, AC104780
S/G/Y/R/B/O NT_005322AC104780841076963RH109052264.00    1 AC016239, AC018534, AC104780
S/G/Y/R/B/O NT_005322AC011741841837673RH563102265.78  2335.501 AC011741, AC016239
S/G/Y/R/B/O NT_005322AC008067843456963WI-5825    2342.801 AC008067
S/G/Y/R/B/O NT_005322AC012355844621063          
S/G/Y/R/B/O NT_005322AC107215845820183          
S/G/Y/R/B/O NT_005322AC084193845980723          
S/G/Y/R/B/O NT_005322AC084297847817433          
S/G/Y/R/B/O NT_005322AC105342848920353          
S/G/Y/R/B/O NT_005322AC079997849741843          
S/G/Y/R/B/O NT_005322AC012075851963993RH986012267.05    1 AC012075
S/G/Y/R/B/O NT_005322AC013262853938283CHLC.GATA26G08    2339.501 AC013262
S/G/Y/R/B/O NT_005322AC079246854187573          
S/G/Y/R/B/O NT_005322AC105419855166973          
S/G/Y/R/B/O NT_005322AC069151856282503          
S/G/Y/R/B/O NT_005322AC079896856639443          
S/G/Y/R/B/O NT_005322AC010985858249263WI-10828    2341.501AC069093, AC010985, AC069093
S/G/Y/R/B/O NT_005322AC114767859928531          
S/G/Y/R/B/O NT_005322AC105761859939981          
S/G/Y/R/B/O NT_005322AC010105861420403D2S289    2365.001 AC010105
S/G/Y/R/B/O NT_005322AC010105861420403RH134572278.6723379.00  1 AC010105


  NT_005322 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005322AC109638861879363          
S/G/Y/R/B/O NT_005322AC104799863270883WI-4190    2346.201AC114767, AC026893, AC104799, AC114767
S/G/Y/R/B/O NT_005322AC104799863752993CHLC.GATA71D09    2346.101AC114767, AC026893, AC034300, AC104799, AC114767
S/G/Y/R/B/O NT_005322AC104799864095253CHLC.GATA14B12.1053    2346.101AC114767, AC026893, AC034300, AC104799, AC114767
S/G/Y/R/B/O NT_005322AC098817864535993          
S/G/Y/R/B/O NT_005322AC105349866060353          
S/G/Y/R/B/O NT_005322AC013719866132873          
S/G/Y/R/B/O NT_005322AC010903867729133AFMB297YC5    2351.701 AC010903
S/G/Y/R/B/O NT_005322AC013786868559061          
S/G/Y/R/B/O NT_005322AC007670868636331          
S/G/Y/R/B/O NT_005322AC069093868710461          
S/G/Y/R/B/O NT_005322 - RH679752266.77    1AC016758, AC016758
S/G/Y/R/B/O NT_005322 - SGC35492    2331.900AC069387, AC069387
S/G/Y/R/B/O NT_005322 - RH684562267.82    1AC073091, AC073091, AC083850
S/G/Y/R/B/O NT_005322 - WI-10626    2349.401AC016908, AC016908, AC107073
S/G/Y/R/B/O NT_005322 - AFMA067XH5    2358.101AC010744, AC010744