Chromosome 2 - RH Maps - Single Contig

Chromosome 2 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_033005	NT_022221	NT_022139	NT_022270	NT_022194	NT_022327	NT_005334	NT_033008
NT_033000	NT_005214	NT_033002	NT_022227	NT_015926	NT_005204	NT_030589	NT_005367
NT_015120	NT_026239	NT_005389	NT_005399	NT_005375	NT_032985	NT_032982	NT_032996
NT_033007	NT_033006	NT_032984	NT_032999	NT_022354	NT_033004	NT_022184	NT_005322
NT_022143	NT_015805	NT_033003	NT_032992	NT_029235	NT_032994	NT_022300	NT_026970
NT_032987	NT_022171	NT_032997	NT_005429	NT_005224	NT_029895	NT_022240	NT_031762
NT_032990	NT_019306	NT_026982	NT_030595	NT_022222	NT_029927	NT_005079	NT_022135
NT_032991	NT_022140	NT_029911	NT_028068	NT_030590	NT_005058	NT_029926	NT_005129
NT_022172	NT_005273	NT_005435	NT_005151	NT_031761	NT_022154	NT_005343	NT_005332
NT_025652	NT_032998	NT_005265	NT_005031	NT_022339	NT_030600	NT_022197	NT_005483
NT_005062	NT_022155	NT_032995	NT_005190	NT_030603	NT_005417	NT_028103	NT_033001
NT_005037	NT_005229	NT_005370	NT_005034	NT_005078	NT_005486	NT_031748	NT_005337
NT_005403	NT_032986	NT_022115	NT_005414	NT_022315	NT_005120	NT_022173	NT_022388
NT_005416	NT_005472	NT_022250	NT_032981	NT_026250

NT_005435

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_005435	AC093738	153009320	3	RH12568	2	508.35					1		AC093738
S/G/Y/R/B/O	NT_005435	AC093738	153009340	3	RH25569	2	508.35					1		AC093738
S/G/Y/R/B/O	NT_005435	AC093738	153010374	3	RH68892	2	506.13					1		AC093738
S/G/Y/R/B/O	NT_005435	AC093738	153010973	3	RH27180	2	508.45					1		AC093738
S/G/Y/R/B/O	NT_005435	AC074097	153082099	3	RH16477	2	506.13					1		AC021292, AC074097
S/G/Y/R/B/O	NT_005435	AC074097	153082189	3	RH26354	2	507.04					1		AC021292, AC074097
S/G/Y/R/B/O	NT_005435	AC104777	153176569	3	RH104449	2	508.45					1		AC021292, AC104777
S/G/Y/R/B/O	NT_005435	AC068551	153210946	3
S/G/Y/R/B/O	NT_005435	AC005036	153445541	3	RH42501	2	508.25			2	787.20	1		AC005036
S/G/Y/R/B/O	NT_005435	AC005036	153505683	3	RH31650			2	7158.00			1		AC005036
S/G/Y/R/B/O	NT_005435	AC023469	153528764	3
S/G/Y/R/B/O	NT_005435	AC018731	153789647	3	RH56265	2	508.15			2	789.10	1		AC018731, AC068277
S/G/Y/R/B/O	NT_005435	AC009311	153811578	3	RH70601	2	508.15					1		AC009311, AC068277
S/G/Y/R/B/O	NT_005435	AC009311	153951383	3	RH68752	2	508.25					1		AC009311, AC093739
S/G/Y/R/B/O	NT_005435	AC009497	154018161	3	RH94042	2	508.25					1		AC009497
S/G/Y/R/B/O	NT_005435	AC009497	154022900	3	RH32307			2	7177.00			1		AC009497
S/G/Y/R/B/O	NT_005435	AC009497	154022900	3	RH56486	2	510.25			2	789.20	1		AC009497
S/G/Y/R/B/O	NT_005435	AC009497	154023010	3	RH12459	2	507.44					1		AC009497
S/G/Y/R/B/O	NT_005435	AC009497	154023045	3	RH12278	2	508.25					1		AC009497
S/G/Y/R/B/O	NT_005435	AC009497	154026405	3	RH56679	2	508.25			2	789.10	1		AC009497
S/G/Y/R/B/O	NT_005435	AC009497	154026545	3	RH70613	2	508.25					1		AC009497
S/G/Y/R/B/O	NT_005435	AC009497	154026763	3	RH67958	2	508.25					1		AC009497
S/G/Y/R/B/O	NT_005435	AC009497	154029187	3	RH14674			2	7184.00			1		AC009497
S/G/Y/R/B/O	NT_005435	AC116650	154145890	1
S/G/Y/R/B/O	NT_005435	AC107052	154321397	3	RH45774	2	508.25					1		AC107052
S/G/Y/R/B/O	NT_005435	AC097448	154332406	3	RH37927			2	7218.00			1		AC097448
S/G/Y/R/B/O	NT_005435	AC097448	154342020	3	RH103915	2	503.66					1		AC097448
S/G/Y/R/B/O	NT_005435	AC097448	154343991	3	RH48845	2	508.35					1		AC097448
S/G/Y/R/B/O	NT_005435	AC097448	154379081	3	RH56690	2	508.15			2	789.10	1		AC097448
S/G/Y/R/B/O	NT_005435	AC068547	154502314	3	RH30765			2	7205.00			1		AC068547
S/G/Y/R/B/O	NT_005435	AC068547	154519577	3	WI-4798					2	789.10	1		AC068547
S/G/Y/R/B/O	NT_005435	AC079790	154661890	3	RH70730	2	508.25					1		AC079790
S/G/Y/R/B/O	NT_005435	AC079790	154665529	3	RH56173	2	508.25			2	789.10	1		AC079790
S/G/Y/R/B/O	NT_005435	AC079790	154665555	3	RH80556	2	508.35					1		AC079790
S/G/Y/R/B/O	NT_005435		-		RH16515	2	508.25					0	AC079344,	AC079344
S/G/Y/R/B/O	NT_005435		-		RH48670	2	503.86					0
S/G/Y/R/B/O	NT_005435		-		RH80835	2	503.82					1	AC019304, AC093674,	AC019304, AC093674
S/G/Y/R/B/O	NT_005435		-		RH91624	2	507.45					0	AC012443,	AC012443