Chromosome 2 - RH Maps - Single Contig

Chromosome 2 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_033005	NT_022221	NT_022139	NT_022270	NT_022194	NT_022327	NT_005334	NT_033008
NT_033000	NT_005214	NT_033002	NT_022227	NT_015926	NT_005204	NT_030589	NT_005367
NT_015120	NT_026239	NT_005389	NT_005399	NT_005375	NT_032985	NT_032982	NT_032996
NT_033007	NT_033006	NT_032984	NT_032999	NT_022354	NT_033004	NT_022184	NT_005322
NT_022143	NT_015805	NT_033003	NT_032992	NT_029235	NT_032994	NT_022300	NT_026970
NT_032987	NT_022171	NT_032997	NT_005429	NT_005224	NT_029895	NT_022240	NT_031762
NT_032990	NT_019306	NT_026982	NT_030595	NT_022222	NT_029927	NT_005079	NT_022135
NT_032991	NT_022140	NT_029911	NT_028068	NT_030590	NT_005058	NT_029926	NT_005129
NT_022172	NT_005273	NT_005435	NT_005151	NT_031761	NT_022154	NT_005343	NT_005332
NT_025652	NT_032998	NT_005265	NT_005031	NT_022339	NT_030600	NT_022197	NT_005483
NT_005062	NT_022155	NT_032995	NT_005190	NT_030603	NT_005417	NT_028103	NT_033001
NT_005037	NT_005229	NT_005370	NT_005034	NT_005078	NT_005486	NT_031748	NT_005337
NT_005403	NT_032986	NT_022115	NT_005414	NT_022315	NT_005120	NT_022173	NT_022388
NT_005416	NT_005472	NT_022250	NT_032981	NT_026250

NT_022339

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_022339	AC068833	192303397	1
S/G/Y/R/B/O	NT_022339	AC104788	192306565	3
S/G/Y/R/B/O	NT_022339	AC013439	192466905	1	RH16954	2	598.63					1		AC013439
S/G/Y/R/B/O	NT_022339	AC013439	192480367	1	CHLC.GATA12B05.697					2	928.80	1		AC013439
S/G/Y/R/B/O	NT_022339	AC013439	192544108	1	RH65593	2	599.52					1		AC013439
S/G/Y/R/B/O	NT_022339	AC013439	192552239	1	RH25004	2	599.52					1		AC013439
S/G/Y/R/B/O	NT_022339	AC013439	192552398	1	RH56422	2	599.52			2	929.50	1		AC013439
S/G/Y/R/B/O	NT_022339	AC013439	192553268	1	RH1766			2	8613.00			1		AC013439
S/G/Y/R/B/O	NT_022339	AC013439	192556693	1	RH36364	2	599.63					1		AC013439
S/G/Y/R/B/O	NT_022339	AC013439	192568434	1	SGC34910					2	927.30	1		AC013439
S/G/Y/R/B/O	NT_022339	AC013439	192568434	1	RH56938	2	618.12					1		AC013439
S/G/Y/R/B/O	NT_022339	AC013439	192568505	1	RH16273	2	599.52					1		AC013439
S/G/Y/R/B/O	NT_022339	AC013439	192568612	1	RH67634	2	599.52					1		AC013439
S/G/Y/R/B/O	NT_022339	AC012488	192657785	3	RH48880	2	617.64					1		AC012488
S/G/Y/R/B/O	NT_022339	AC012488	192658083	3	RH25156	2	599.52					1		AC012488
S/G/Y/R/B/O	NT_022339	AC012488	192662084	3	RH17929	2	599.52					1		AC012488
S/G/Y/R/B/O	NT_022339	AC012488	192662290	3	RH18336	2	599.52					1		AC012488
S/G/Y/R/B/O	NT_022339	AC012488	192689466	3	RH42879			2	8643.00			1		AC012488
S/G/Y/R/B/O	NT_022339	AC013468	192738057	3	RH92442	2	600.89					1		AC013468
S/G/Y/R/B/O	NT_022339	AC013468	192738413	3	RH11855	2	600.99					1		AC013468
S/G/Y/R/B/O	NT_022339	AC013468	192749894	3	RH56440	2	600.89			2	931.80	1		AC013468
S/G/Y/R/B/O	NT_022339	AC013468	192756914	3	RH79635	2	599.84					1		AC013468
S/G/Y/R/B/O	NT_022339	AC013468	192760467	3	RH102446	2	600.89					1		AC013468
S/G/Y/R/B/O	NT_022339	AC013468	192762890	3	RH57123	2	600.99			2	931.80	1		AC013468
S/G/Y/R/B/O	NT_022339	AC013468	192766309	3	RH70070	2	599.84					1		AC013468
S/G/Y/R/B/O	NT_022339	AC013468	192766379	3	RH26556	2	600.58					1		AC013468
S/G/Y/R/B/O	NT_022339	AC013468	192776551	3	SGC38239					2	931.70	1		AC013468
S/G/Y/R/B/O	NT_022339	AC013468	192776551	3	RH56289	2	602.12					1		AC013468
S/G/Y/R/B/O	NT_022339	AC013468	192776570	3	RH93649	2	601.10					1		AC013468
S/G/Y/R/B/O	NT_022339	AC013468	192781450	3	WI-3652					2	931.80	1		AC013468
S/G/Y/R/B/O	NT_022339		-		RH69214	2	601.63					1	AC013274,	AC013274
S/G/Y/R/B/O	NT_022339		-		RH37767			2	8620.00			1	AC023499, AC026120,	AC018673, AC022512, AC023497, AC023499, AC026120, AL583823
S/G/Y/R/B/O	NT_022339		-		RH37958			2	8626.00			0		AY016295
S/G/Y/R/B/O	NT_022339		-		RH9047			2	8626.00			0		AY016295