Chromosome 2 - RH Maps - Single Contig

Chromosome 2 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_033005	NT_022221	NT_022139	NT_022270	NT_022194	NT_022327	NT_005334	NT_033008
NT_033000	NT_005214	NT_033002	NT_022227	NT_015926	NT_005204	NT_030589	NT_005367
NT_015120	NT_026239	NT_005389	NT_005399	NT_005375	NT_032985	NT_032982	NT_032996
NT_033007	NT_033006	NT_032984	NT_032999	NT_022354	NT_033004	NT_022184	NT_005322
NT_022143	NT_015805	NT_033003	NT_032992	NT_029235	NT_032994	NT_022300	NT_026970
NT_032987	NT_022171	NT_032997	NT_005429	NT_005224	NT_029895	NT_022240	NT_031762
NT_032990	NT_019306	NT_026982	NT_030595	NT_022222	NT_029927	NT_005079	NT_022135
NT_032991	NT_022140	NT_029911	NT_028068	NT_030590	NT_005058	NT_029926	NT_005129
NT_022172	NT_005273	NT_005435	NT_005151	NT_031761	NT_022154	NT_005343	NT_005332
NT_025652	NT_032998	NT_005265	NT_005031	NT_022339	NT_030600	NT_022197	NT_005483
NT_005062	NT_022155	NT_032995	NT_005190	NT_030603	NT_005417	NT_028103	NT_033001
NT_005037	NT_005229	NT_005370	NT_005034	NT_005078	NT_005486	NT_031748	NT_005337
NT_005403	NT_032986	NT_022115	NT_005414	NT_022315	NT_005120	NT_022173	NT_022388
NT_005416	NT_005472	NT_022250	NT_032981	NT_026250

NT_031748

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_031748	AC093382	219927946	3	RH56575	2	668.13					1		AC093382
S/G/Y/R/B/O	NT_031748	AC093382	219927946	3	WI-17547					2	990.10	1		AC093382
S/G/Y/R/B/O	NT_031748	AC093382	219928096	3	RH16678	2	675.76					1		AC093382
S/G/Y/R/B/O	NT_031748	AC093382	219929441	3	RH47987	2	663.23					1		AC093382
S/G/Y/R/B/O	NT_031748	AC010686	219939411	3	RH13305	2	663.33	2	9321.00			1		AC010686
S/G/Y/R/B/O	NT_031748	AC010686	219958484	3	RH56366	2	667.09	2	9354.00			1		AC010686
S/G/Y/R/B/O	NT_031748	AC010686	219958484	3	SGC33908					2	998.50	1		AC010686
S/G/Y/R/B/O	NT_031748	AC010686	219958542	3	RH16400	2	675.56					1		AC010686
S/G/Y/R/B/O	NT_031748	AC010686	220079370	3	RH56414	2	673.42					1		AC009521, AC010686
S/G/Y/R/B/O	NT_031748	AC010686	220079370	3	WI-16791					2	999.10	1		AC009521, AC010686
S/G/Y/R/B/O	NT_031748	AC012513	220163361	3	RH8813			2	9354.00			1	AC008123,	AC008123, AC012513
S/G/Y/R/B/O	NT_031748	AC012513	220168949	3	RH49482	2	675.56	2	9361.00			1		AC012513
S/G/Y/R/B/O	NT_031748	AC012513	220173749	3	RH56931	2	675.36	2	9361.00			1	AC008123,	AC008123, AC012513
S/G/Y/R/B/O	NT_031748	AC012513	220173749	3	SGC33338					2	1002.60	1	AC008123,	AC008123, AC012513
S/G/Y/R/B/O	NT_031748	AC012513	220185141	3	RH104285	2	661.23					1	AC008123,	AC008123, AC012513
S/G/Y/R/B/O	NT_031748	AC012513	220185608	3	RH56419	2	667.98					1	AC008123,	AC008123, AC012513
S/G/Y/R/B/O	NT_031748	AC012513	220185608	3	WI-12939					2	998.50	1	AC008123,	AC008123, AC012513
S/G/Y/R/B/O	NT_031748	AC012513	220186922	3	RH56268	2	675.26					1	AC008123,	AC008123, AC012513
S/G/Y/R/B/O	NT_031748	AC012513	220186922	3	TIGR-A004W06					2	1002.80	1	AC008123,	AC008123, AC012513
S/G/Y/R/B/O	NT_031748	AC012513	220190311	3	RH14142			2	9354.00			1	AC008123,	AC008123, AC012513
S/G/Y/R/B/O	NT_031748	AC012513	220191062	3	RH56518	2	669.45					1	AC008123,	AC008123, AC012513
S/G/Y/R/B/O	NT_031748	AC012513	220191062	3	WI-8140					2	998.60	1	AC008123,	AC008123, AC012513
S/G/Y/R/B/O	NT_031748	AC012513	220201448	3	RH56205	2	675.66					1	AC008123, AC069155,	AC008123, AC012513, AC069155
S/G/Y/R/B/O	NT_031748	AC012513	220201448	3	WI-14730					2	999.10	1	AC008123, AC069155,	AC008123, AC012513, AC069155
S/G/Y/R/B/O	NT_031748	AC012513	220204445	3	RH57143	2	666.29	2	9354.00	2	991.00	1	AC008123, AC069155,	AC008123, AC069155
S/G/Y/R/B/O	NT_031748	AC012513	220242974	3	RH57052	2	675.36	2	9347.00			1	AC008123, AC069155,	AC008123, AC012513, AC069155
S/G/Y/R/B/O	NT_031748	AC012513	220242974	3	SGC32061					2	1002.60	1	AC008123, AC069155,	AC008123, AC012513, AC069155
S/G/Y/R/B/O	NT_031748	AC008123	220270889	3
S/G/Y/R/B/O	NT_031748	AC069155	220288078	3
S/G/Y/R/B/O	NT_031748		-		RH103713	2	670.08					1	AC011235,	AC011235, AC022195
S/G/Y/R/B/O	NT_031748		-		RH11837	2	674.97					1	AC073284,	AC073284
S/G/Y/R/B/O	NT_031748		-		RH56260	2	667.56					1	AC007563,	AC007563
S/G/Y/R/B/O	NT_031748		-		RH56354	2	667.09					1	AC007563,	AC007563
S/G/Y/R/B/O	NT_031748		-		RH56396	2	666.99					1	AC023273, AC073321, AC098820,	AC023273, AC073321, AC098820
S/G/Y/R/B/O	NT_031748		-		RH65510	2	666.19					1	AC023273, AC073321, AC098820,	AC023273, AC073321, AC098820
S/G/Y/R/B/O	NT_031748		-		RH80987	2	667.82					1	AC009492,	AC009492
S/G/Y/R/B/O	NT_031748		-		RH91510	2	667.98					0
S/G/Y/R/B/O	NT_031748		-		RH92315	2	674.96					1	AC016708,	AC016708, AF038042
S/G/Y/R/B/O	NT_031748		-		RH93263	2	667.98					1	AC009492,	AC009492