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  Chromosome 2 - RH Maps - Single Contig
 

Chromosome 2 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005399
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005399AC064806614447021          
S/G/Y/R/B/O NT_005399AC007179614469613          
S/G/Y/R/B/O NT_005399AC007006616967353AFMA053XF9    2252.701 AC007006
S/G/Y/R/B/O NT_005399AC007100617840053RH1043362180.53    1 AC015740
S/G/Y/R/B/O NT_005399AC007100618618103RH30045  22339.00  1 AC007100
S/G/Y/R/B/O NT_005399AC009482619287233          
S/G/Y/R/B/O NT_005399AC007132621020333RH7813  22373.00  1 AC007132
S/G/Y/R/B/O NT_005399AC007037621956843          
S/G/Y/R/B/O NT_005399AC007381623644243D2S357    2250.301 AC007381, AC048389
S/G/Y/R/B/O NT_005399AC007381624934203RH940522193.05    1 AC007381
S/G/Y/R/B/O NT_005399AC009970625257263RH704632193.88    1 AC009970
S/G/Y/R/B/O NT_005399AC009970625786573RH803262212.72    1 AC009970, AC040935
S/G/Y/R/B/O NT_005399AC009970625786613RH450412180.53    1 AC009970, AC040935
S/G/Y/R/B/O NT_005399AC012498627765513RH126622192.89    1 AC012498, AF005898
S/G/Y/R/B/O NT_005399AC012498628202223RH700222193.83    1 AC012498
S/G/Y/R/B/O NT_005399AC011245628428313RH450882188.32    1 AC011245
S/G/Y/R/B/O NT_005399AC010733629635263RH569202193.88  2259.701 AC010733
S/G/Y/R/B/O NT_005399AC010733629635263RH37735  24454.00  1 AC010733
S/G/Y/R/B/O NT_005399AC010733629635753RH709022193.88    1 AC010733
S/G/Y/R/B/O NT_005399AC010733629801063RH158532193.88    1 AC010733
S/G/Y/R/B/O NT_005399AC010733629814063RH570672193.88  2259.901 AC010733
S/G/Y/R/B/O NT_005399AC010733629817753RH166832193.88    1 AC010733
S/G/Y/R/B/O NT_005399AC010733630894983RH685092193.88    1 AC010733
S/G/Y/R/B/O NT_005399AC010733630895913RH568502189.82  2257.901 AC010733
S/G/Y/R/B/O NT_005399AC010733630895913RH33076  24468.00  1 AC010733
S/G/Y/R/B/O NT_005399AC010733630898513RH693882193.88    1 AC010733
S/G/Y/R/B/O NT_005399AC074249630966003          
S/G/Y/R/B/O NT_005399AC016747631061623RH31611  24461.00  1 AC016747
S/G/Y/R/B/O NT_005399AC016747631650063WI-13159    2259.701 AC016747
S/G/Y/R/B/O NT_005399AC016747631650063RH567382194.39    1 AC016747
S/G/Y/R/B/O NT_005399AC016747631826143RH934182193.88    1 AC016747
S/G/Y/R/B/O NT_005399AC016747632237713RH164542189.82    1 AC016747
S/G/Y/R/B/O NT_005399AC016747632276183RH802672192.64    1 AC016747
S/G/Y/R/B/O NT_005399AC016747632277113RH937002190.02    2AL593856, AC013593, AC016747, AL593856
S/G/Y/R/B/O NT_005399AC016747632280703RH684362193.88    1 AC016747
S/G/Y/R/B/O NT_005399AC016747632281143RH570812187.61  2254.601 AC016747
S/G/Y/R/B/O NT_005399AC016747632284643RH560552189.92  2256.801 AC016747
S/G/Y/R/B/O NT_005399AC016747632308793RH674222193.88    1 AC016747
S/G/Y/R/B/O NT_005399AC016747632319913RH457772193.88    1 AC016747
S/G/Y/R/B/O NT_005399AC018889632599943RH457462189.82    1 AC018889
S/G/Y/R/B/O NT_005399AC018889632805033RH930112189.82    1 AC018889
S/G/Y/R/B/O NT_005399AC018889633166233SGC44477    2259.701 AC018889
S/G/Y/R/B/O NT_005399AC018889633166233RH565092194.39    1 AC018889
S/G/Y/R/B/O NT_005399AC018889633189253RH563442193.88  2259.701 AC018889
S/G/Y/R/B/O NT_005399AC018889633390833RH163952193.88    1AC016894, AC016894, AC018889
S/G/Y/R/B/O NT_005399AC016894634595603RH684432193.88    1 AC016894, AC093869
S/G/Y/R/B/O NT_005399AC016727634837143D2S337    2259.801 AC016727, AC093869
S/G/Y/R/B/O NT_005399AC016727634837143RH135922189.8222441.00  1 AC016727, AC093869
S/G/Y/R/B/O NT_005399AC016727635190143RH120252192.95    1 AC016727, AC093869
S/G/Y/R/B/O NT_005399AC016727635193733RH463372189.52    1 AC016727, AC093869


  NT_005399 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005399AC000360636336753          
S/G/Y/R/B/O NT_005399AC092103637249631          
S/G/Y/R/B/O NT_005399AC108039637756233          
S/G/Y/R/B/O NT_005399AC074251639083781RH928362189.82    1AC107081, AC074251, AC107081
S/G/Y/R/B/O NT_005399AC107081639517171RH119182194.50    1AC074251, AC074251, AC107081
S/G/Y/R/B/O NT_005399AC107081639518721RH1222  22461.00  1AC074251, AC074251, AC107081
S/G/Y/R/B/O NT_005399AC107081639549481RH688402194.50    1AC074251, AC074251, AC107081
S/G/Y/R/B/O NT_005399AC107081639714051RH564532189.82  2257.901 AC107081
S/G/Y/R/B/O NT_005399AC107081639714631RH677012194.50    1 AC107081
S/G/Y/R/B/O NT_005399AC107081640404801RH31609  22461.00  1 AC107081
S/G/Y/R/B/O NT_005399 - RH1023812192.26    0  
S/G/Y/R/B/O NT_005399 - RH662352189.92    0  
S/G/Y/R/B/O NT_005399 - RH688252190.02    0AC016894, AC016894
S/G/Y/R/B/O NT_005399 - RH795812187.91    1AC009501, AC009501, AC079838
S/G/Y/R/B/O NT_005399 - RH803122193.62    0