Chromosome 2 - RH Maps - Single Contig

Chromosome 2 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_033005	NT_022221	NT_022139	NT_022270	NT_022194	NT_022327	NT_005334	NT_033008
NT_033000	NT_005214	NT_033002	NT_022227	NT_015926	NT_005204	NT_030589	NT_005367
NT_015120	NT_026239	NT_005389	NT_005399	NT_005375	NT_032985	NT_032982	NT_032996
NT_033007	NT_033006	NT_032984	NT_032999	NT_022354	NT_033004	NT_022184	NT_005322
NT_022143	NT_015805	NT_033003	NT_032992	NT_029235	NT_032994	NT_022300	NT_026970
NT_032987	NT_022171	NT_032997	NT_005429	NT_005224	NT_029895	NT_022240	NT_031762
NT_032990	NT_019306	NT_026982	NT_030595	NT_022222	NT_029927	NT_005079	NT_022135
NT_032991	NT_022140	NT_029911	NT_028068	NT_030590	NT_005058	NT_029926	NT_005129
NT_022172	NT_005273	NT_005435	NT_005151	NT_031761	NT_022154	NT_005343	NT_005332
NT_025652	NT_032998	NT_005265	NT_005031	NT_022339	NT_030600	NT_022197	NT_005483
NT_005062	NT_022155	NT_032995	NT_005190	NT_030603	NT_005417	NT_028103	NT_033001
NT_005037	NT_005229	NT_005370	NT_005034	NT_005078	NT_005486	NT_031748	NT_005337
NT_005403	NT_032986	NT_022115	NT_005414	NT_022315	NT_005120	NT_022173	NT_022388
NT_005416	NT_005472	NT_022250	NT_032981	NT_026250

NT_031762

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_031762	AC011753	111589426	3	RH67352	2	389.41					1		AC011753
S/G/Y/R/B/O	NT_031762	AC011753	111590376	3	RH56881	2	388.68					1		AC011753
S/G/Y/R/B/O	NT_031762	AC011753	111590376	3	SGC34236					2	614.20	1		AC011753
S/G/Y/R/B/O	NT_031762	AC011753	111590376	3	RH17449	2	390.14					1		AC011753
S/G/Y/R/B/O	NT_031762	AC011753	111590454	3	RH67466	2	389.85					1		AC011753
S/G/Y/R/B/O	NT_031762	AC074387	111712259	3	RH36189	2	388.63					2	AC114776,	AC074387, AC109815, AC110613, AC114776
S/G/Y/R/B/O	NT_031762	AC074387	111727991	3	RH12710	2	391.48					1		AC074387, AC109815
S/G/Y/R/B/O	NT_031762	AC013271	111796663	3	RH102857	2	409.01					3	AC064810, AC093616, AC109354, AC112246,	AC013271, AC064810, AC093616, AC108938, AC109354, AC109815, AC111200, AC112246, AC114781
S/G/Y/R/B/O	NT_031762	AC013271	111816866	3	RH70365	2	391.78					4	AC012487, AC064810, AC093616, AC109354, AC112246,	AC012487, AC013271, AC064810, AC083903, AC093616, AC108938, AC109354, AC109815, AC111200, AC112246, AC114781
S/G/Y/R/B/O	NT_031762	AC013271	111825759	3	RH33322			2	4179.00			2	AC112246, AC115115,	AC013271, AC108938, AC109815, AC112246, AC114781, AC115115
S/G/Y/R/B/O	NT_031762	AC013271	111829040	3	RH56601	2	389.30					5	AC009963, AC012487, AC097527, AC112246, AC114755, AC115115,	AC009963, AC012487, AC013271, AC097527, AC108938, AC109815, AC112246, AC114755, AC114781, AC115115
S/G/Y/R/B/O	NT_031762	AC013271	111829040	3	WI-15297					2	623.40	5	AC009963, AC012487, AC097527, AC112246, AC114755, AC115115,	AC009963, AC012487, AC013271, AC097527, AC108938, AC109815, AC112246, AC114755, AC114781, AC115115
S/G/Y/R/B/O	NT_031762	AC013271	111858247	3	RH57036	2	409.57			2	603.30	1	AC062014, AC112246,	AC013271, AC062014, AC108938, AC112246, AC114781
S/G/Y/R/B/O	NT_031762	AC013271	111858301	3	RH67339	2	406.32					1	AC062014, AC112246,	AC013271, AC062014, AC108938, AC112246, AC114781
S/G/Y/R/B/O	NT_031762	AC013271	111877762	3	RH99316	2	387.90					2	AC010095, AC011919,	AC010095, AC011919, AC013271
S/G/Y/R/B/O	NT_031762	AC013271	111896922	3	RH70783	2	391.37					2	AC011919, AC073415,	AC011919, AC013271, AC073415, AC112229
S/G/Y/R/B/O	NT_031762	AC013268	111939957	3	RH102039	2	389.52					1	AC011919, AC020990,	AC011919, AC013268, AC020990, AC108938, AC112229
S/G/Y/R/B/O	NT_031762	AC013268	111960747	3	RH57019	2	388.24					1	AC011919,	AC011919, AC013268, AC108938
S/G/Y/R/B/O	NT_031762	AC013268	111960747	3	WI-21119					2	617.70	1	AC011919,	AC011919, AC013268, AC108938
S/G/Y/R/B/O	NT_031762	AC013268	112055705	3	RH18006	2	389.85					1	AC020990,	AC013268, AC020990
S/G/Y/R/B/O	NT_031762	AC092664	112156613	3	RH51284	10	488.42			10	578.70	1	AL121928,	AL121928
S/G/Y/R/B/O	NT_031762	AC020990	112205616	1
S/G/Y/R/B/O	NT_031762	AC011919	112209344	1