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  Chromosome 2 - RH Maps - Single Contig
 

Chromosome 2 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_015120
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_015120AC083827487475671          
S/G/Y/R/B/O NT_015120AC009975487610393          
S/G/Y/R/B/O NT_015120AC073955489723443          
S/G/Y/R/B/O NT_015120AC009971490674983AFM079XG9    2215.201 AC009971, AC026126
S/G/Y/R/B/O NT_015120AC104622492107673          
S/G/Y/R/B/O NT_015120AC068291492618811          
S/G/Y/R/B/O NT_015120AC109817493718373          
S/G/Y/R/B/O NT_015120AC078994494595223RH261412158.62    1 AC008247, AC011931, AC078994
S/G/Y/R/B/O NT_015120AC078994494603213RH567632150.18  2208.401 AC008247, AC011931, AC078994
S/G/Y/R/B/O NT_015120AC078994494610323RH167292150.70    1 AC008247, AC011931, AC078994
S/G/Y/R/B/O NT_015120AC078994495191153RH934242150.70    1 AC008247, AC011931, AC078994
S/G/Y/R/B/O NT_015120AC069550495802943          
S/G/Y/R/B/O NT_015120AC068725497860943RH983602160.07    1 AC068055, AC068725
S/G/Y/R/B/O NT_015120AC068715498921063WI-10722    2210.701 AC068715
S/G/Y/R/B/O NT_015120AC007462501157593RH278952160.34    1 AC007462
S/G/Y/R/B/O NT_015120AC007462501252673WI-3027    2218.301 AC007462
S/G/Y/R/B/O NT_015120AC009234501343593RH567312154.46  2208.501 AC009234
S/G/Y/R/B/O NT_015120AC009234501812283RH283062160.07    1 AC009234
S/G/Y/R/B/O NT_015120AC007560503573123RH563392159.26  2216.501 AC007560
S/G/Y/R/B/O NT_015120AC007682504232353RH166672154.56    1 AC007682
S/G/Y/R/B/O NT_015120AC007682505952193WI-9893    2222.101 AC007682, AC027431
S/G/Y/R/B/O NT_015120AC010721506003583RH132342152.5322114.00  1 AC010721, AC027431
S/G/Y/R/B/O NT_015120AC007680506778643          
S/G/Y/R/B/O NT_015120AC007402508239973          
S/G/Y/R/B/O NT_015120AC080091510846083RH1294  22114.00  1 AC074235, AC080091
S/G/Y/R/B/O NT_015120AC080091510846713RH369272162.17    1 AC074235, AC080091
S/G/Y/R/B/O NT_015120AC064868511735143          
S/G/Y/R/B/O NT_015120AC097463513496953          
S/G/Y/R/B/O NT_015120AC079304515061703          
S/G/Y/R/B/O NT_015120AC104310516923013          
S/G/Y/R/B/O NT_015120AC079300516942953          
S/G/Y/R/B/O NT_015120AC087073519289743RH921572169.11    1AC092572, AC087073, AC092572
S/G/Y/R/B/O NT_015120AC087073519367963RH805392161.85    1AC092572, AC087073, AC092572
S/G/Y/R/B/O NT_015120AC092572519456251          
S/G/Y/R/B/O NT_015120AC092533520036943          
S/G/Y/R/B/O NT_015120AC079394521233823          
S/G/Y/R/B/O NT_015120AC073513522031981          
S/G/Y/R/B/O NT_015120AC091485530245431RH712402135.97    1 AC091485
S/G/Y/R/B/O NT_015120AC091485530276351RH685472147.27    1 AC091485
S/G/Y/R/B/O NT_015120AC091485530283591RH37816  22009.00  1 AC091485
S/G/Y/R/B/O NT_015120AC093732523674051RH928992140.45    2AC016722, AC016722, AC093732
S/G/Y/R/B/O NT_015120AC093732542818231RH1021142142.44    1 AC093732
S/G/Y/R/B/O NT_015120AC007189524188673RH691642158.62    1 AC007189
S/G/Y/R/B/O NT_015120AC007189524190193RH7863  22030.00  1 AC007189
S/G/Y/R/B/O NT_015120AC007189524525673WI-4002    2207.801 AC007189
S/G/Y/R/B/O NT_015120AC091788525886663WI-4108    2210.401 AC091788
S/G/Y/R/B/O NT_015120AC087816526127793          
S/G/Y/R/B/O NT_015120AC073082526945663RH177202148.85    1 AC073082
S/G/Y/R/B/O NT_015120AC073082528212793RH32857  22036.00  1 AC073082
S/G/Y/R/B/O NT_015120AC073082528212903RH165822135.91    1 AC073082


  NT_015120 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_015120AC073082528475763RH476242128.51    1 AC073082
S/G/Y/R/B/O NT_015120AC093635528668103RH1338  22019.00  1 AC093635
S/G/Y/R/B/O NT_015120AC093635529037593RH33070  22019.002207.201 AC093635
S/G/Y/R/B/O NT_015120AC093635529037593RH562442135.97    1 AC093635
S/G/Y/R/B/O NT_015120AC093635529198363WI-18131    2213.501 AC093635
S/G/Y/R/B/O NT_015120AC093635529198363RH563212135.97    1 AC093635
S/G/Y/R/B/O NT_015120AC092791530435193          
S/G/Y/R/B/O NT_015120AC092650532000703AFM196XF6    2213.502 AC036199, AC064831, AC092650, AC112648
S/G/Y/R/B/O NT_015120AC105913533542683          
S/G/Y/R/B/O NT_015120AC079807534569203SGC38094    2213.501 AC079807
S/G/Y/R/B/O NT_015120AC079807534569203RH563352136.47    1 AC079807
S/G/Y/R/B/O NT_015120AC006509535299063RH570482146.8521971.002207.201 AC006509, AC092678, AY082894
S/G/Y/R/B/O NT_015120AC006509535310453RH562502146.85  2207.201 AC006509, AC092678, AY082894
S/G/Y/R/B/O NT_015120AC079250536397823          
S/G/Y/R/B/O NT_015120AC009600537646192RH797262135.91    1 AC009600
S/G/Y/R/B/O NT_015120AC009600537907792GCT15D07    2202.101 AC009600
S/G/Y/R/B/O NT_015120AC009600537976742RH1035352135.91    1 AC009600
S/G/Y/R/B/O NT_015120AC009600538462882RH33326  21987.002205.901 AC009600
S/G/Y/R/B/O NT_015120AC009600538462882RH568722134.39    1 AC009600
S/G/Y/R/B/O NT_015120AC009600538463332RH165132142.44    1 AC009600
S/G/Y/R/B/O NT_015120AC009600538466322RH477842142.44    1 AC009600
S/G/Y/R/B/O NT_015120AC009600538496492RH13766  21975.00  1 AC009600
S/G/Y/R/B/O NT_015120AC009600538496512RH1831  21968.00  1 AC009600
S/G/Y/R/B/O NT_015120AC009600538499082RH705332142.44    1 AC009600
S/G/Y/R/B/O NT_015120AC079775539458523RH678882136.57    1 AC079775
S/G/Y/R/B/O NT_015120AC108207540258623          
S/G/Y/R/B/O NT_015120AC106869540278563          
S/G/Y/R/B/O NT_015120AC073283541574963RH14362  21981.002206.501 AC073283
S/G/Y/R/B/O NT_015120AC073283541574963RH570512135.97    1 AC073283
S/G/Y/R/B/O NT_015120AC073283542514993SGC34238    2206.401 AC073283
S/G/Y/R/B/O NT_015120AC073283542514993RH570422135.91    1 AC073283
S/G/Y/R/B/O NT_015120AC073283542568453RH936682140.45    1 AC073283
S/G/Y/R/B/O NT_015120AC073283542640843RH159452142.44    1AC093732, AC073283, AC093732
S/G/Y/R/B/O NT_015120 - RH1020292147.27    1 AC036199, AC064831
S/G/Y/R/B/O NT_015120 - RH119792158.73    0AC078994, AC008247, AC011931, AC078994
S/G/Y/R/B/O NT_015120 - RH695062148.32    0