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  Chromosome 2 - RH Maps - Single Contig
 

Chromosome 2 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005058
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005058AC0926521434635543RH931062494.84    1 AC092652
S/G/Y/R/B/O NT_005058AC0795841435467843WI-5591    2777.801 AC079584
S/G/Y/R/B/O NT_005058AC0795841435474273RH359732494.84    1 AC079584
S/G/Y/R/B/O NT_005058AC0169101437175273RH1039772488.27    1 AC007935, AC016910
S/G/Y/R/B/O NT_005058AC0169101437252823RH564722494.64  2777.801 AC007935, AC016910
S/G/Y/R/B/O NT_005058AC0169101437296253WI-3634    2777.501 AC007935, AC016910
S/G/Y/R/B/O NT_005058AC0106811438719303RH132862491.1926741.00  1 AC010681
S/G/Y/R/B/O NT_005058AC0099571438958753WI-4333    2777.301 AC009957
S/G/Y/R/B/O NT_005058AC0099571439166613RH569532494.64  2777.801 AC009957
S/G/Y/R/B/O NT_005058AC0099571439199833RH1298  26756.00  1 AC009957
S/G/Y/R/B/O NT_005058AC0099571439861643RH695662497.16    1 AC009957
S/G/Y/R/B/O NT_005058AC0101301440928533RH1040272487.57    1 AC010130
S/G/Y/R/B/O NT_005058AC0101301440995763RH567842487.57    1 AC010130
S/G/Y/R/B/O NT_005058AC0101301440995763WI-13463    2762.601 AC010130
S/G/Y/R/B/O NT_005058AC0101301441006323RH184562487.57    1 AC010130
S/G/Y/R/B/O NT_005058AC0101301441010313RH693402495.63    1 AC010130
S/G/Y/R/B/O NT_005058AC0101301441647453RH688192494.84    2AY029472, AC010130, AY029472
S/G/Y/R/B/O NT_005058AC0099511442079183RH693842495.53    2AY029472, AC009951, AY029472
S/G/Y/R/B/O NT_005058AC0099511442183433RH981612488.27    2AY029472, AC009951, AY029472
S/G/Y/R/B/O NT_005058AC0099511442353993RH366812494.84    2AY029472, AC009951, AY029472
S/G/Y/R/B/O NT_005058AC0099511442566603RH33503  26771.002778.102AY029472, AC009951, AY029472
S/G/Y/R/B/O NT_005058AC0099511442566603RH564162482.54    2AY029472, AC009951, AY029472
S/G/Y/R/B/O NT_005058AC0099511442568333RH163382495.63    2AY029472, AC009951, AY029472
S/G/Y/R/B/O NT_005058AC0099511442620043RH567772488.2126778.002777.402AY029472, AC009951, AY029472
S/G/Y/R/B/O NT_005058AC0099511442816263RH567082488.27    1 AC009951
S/G/Y/R/B/O NT_005058AC0099511442816263WI-17978    2759.401 AC009951
S/G/Y/R/B/O NT_005058AC0099511442883383RH166382483.13    1 AC009951
S/G/Y/R/B/O NT_005058AC0099511442906363RH568972495.5626785.002774.101 AC009951
S/G/Y/R/B/O NT_005058AC0100901444098343WI-5772    2775.701 AC010090
S/G/Y/R/B/O NT_005058AC0231281445857493RH136742494.8426830.00  1 AC023128
S/G/Y/R/B/O NT_005058AC0740151446303243          
S/G/Y/R/B/O NT_005058AC0126701447316233RH31646  26817.00  1 AC012670
S/G/Y/R/B/O NT_005058AC0740931448602673RH695222495.56    1 AC074093
S/G/Y/R/B/O NT_005058AC0740931449575113RH456922487.97    1 AC016440, AC036200, AC074093
S/G/Y/R/B/O NT_005058AC0740931449616343RH694012494.84    1 AC016440, AC036200, AC074093
S/G/Y/R/B/O NT_005058AC0966661449790223          
S/G/Y/R/B/O NT_005058AC0648651451108693          
S/G/Y/R/B/O NT_005058AC0924841453124753D2S372    2759.401AC023433, AC023433, AC092484
S/G/Y/R/B/O NT_005058AC0791631454375153RH30041  26931.00  1 AC079163
S/G/Y/R/B/O NT_005058AC0791631454404013RH38574  26914.00  1 AC079163
S/G/Y/R/B/O NT_005058AC0791631455411273RH31644  26889.00  1 AC079163
S/G/Y/R/B/O NT_005058AC0124481455457041          
S/G/Y/R/B/O NT_005058AC0234331455515011          
S/G/Y/R/B/O NT_005058AC0792481455625263          
S/G/Y/R/B/O NT_005058AC0620311456910613          
S/G/Y/R/B/O NT_005058AC1053971458825253WI-3268    2774.101 AC105397
S/G/Y/R/B/O NT_005058AC0094761459017613          
S/G/Y/R/B/O NT_005058AC1127121460841701          
S/G/Y/R/B/O NT_005058AC1059221461164131          
S/G/Y/R/B/O NT_005058AC0930841461961013          


  NT_005058 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005058AC0931131463640613          
S/G/Y/R/B/O NT_005058AC1038811465376173          
S/G/Y/R/B/O NT_005058AC0620321468111963D2S151    2779.901 AC062032, AC079297
S/G/Y/R/B/O NT_005058AC0186781468238643          
S/G/Y/R/B/O NT_005058AC0263371469938313          
S/G/Y/R/B/O NT_005058AC0693331470350723          
S/G/Y/R/B/O NT_005058AC0134061472177033WI-4101    2780.801 AC013406
S/G/Y/R/B/O NT_005058AC0126661473332073WI-5465    2776.901 AC011943, AC012666, AC113393
S/G/Y/R/B/O NT_005058AC0126661473624903RH494812497.16    1 AC011943
S/G/Y/R/B/O NT_005058AC0126661473624903RH29971  27042.00  1 AC011943
S/G/Y/R/B/O NT_005058AC1047761473742483          
S/G/Y/R/B/O NT_005058AC0742391474232363          
S/G/Y/R/B/O NT_005058AC0094801477048913RH685412497.16    1 AC009480
S/G/Y/R/B/O NT_005058AC0094801477127173RH982062483.96    1 AC009480
S/G/Y/R/B/O NT_005058AC0192261478072673RH695992497.16    1 AC019226, AC023269
S/G/Y/R/B/O NT_005058AC0192261478088763RH456612497.26    1 AC019226
S/G/Y/R/B/O NT_005058AC0793911478695713          
S/G/Y/R/B/O NT_005058AC0184651478847063RH31647  26994.00  1 AC018465
S/G/Y/R/B/O NT_005058AC0184651478992753RH256752487.70    1 AC018465
S/G/Y/R/B/O NT_005058AC0184651479652993RH265472501.22    1 AC018465
S/G/Y/R/B/O NT_005058AC0190701480366383          
S/G/Y/R/B/O NT_005058AC0926051481942773RH31648  27007.00  1 AC092605
S/G/Y/R/B/O NT_005058AC0167311482823973RH14628  26970.00  1AC073119, AC016731, AC073119
S/G/Y/R/B/O NT_005058AC0167311482961573RH568002495.46  2778.501AC073119, AC016731, AC073119
S/G/Y/R/B/O NT_005058AC0167311482988103RH565592499.27  2779.801AC073119, AC016731, AC073119
S/G/Y/R/B/O NT_005058AC0170801483879843WI-2990    2758.901 AC017080
S/G/Y/R/B/O NT_005058AC0170801484746943RH8876  26979.00  1 AC017080
S/G/Y/R/B/O NT_005058AC0167631485698293RH563512498.76  2781.101 AC016763
S/G/Y/R/B/O NT_005058AC0167631485703913RH655352499.37    1  
S/G/Y/R/B/O NT_005058AC1054021486434483          
S/G/Y/R/B/O NT_005058AC0731191487069971          
S/G/Y/R/B/O NT_005058 - RH1027022487.30    0  
S/G/Y/R/B/O NT_005058 - RH1033432487.18    0  
S/G/Y/R/B/O NT_005058 - RH255092494.64    1AC013437, AC018856, AC013437, AC018856, AC025003
S/G/Y/R/B/O NT_005058 - RH285952487.80    1AC012003, AC012003
S/G/Y/R/B/O NT_005058 - RH567502495.46    1AC012547, AC013444, AC012547, AC013444, AC025003
S/G/Y/R/B/O NT_005058 - RH920452494.64    1AC078882, AC092575, AC023522, AC072060, AC078882, AC092575
S/G/Y/R/B/O NT_005058 - RH921022495.46    1AC013437, AC018856, AC013437, AC018856
S/G/Y/R/B/O NT_005058 - RH925742497.16    0  
S/G/Y/R/B/O NT_005058 - RH991972499.48    0AC016731, AC016731