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  Chromosome 2 - RH Maps - Single Contig
 

Chromosome 2 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005190
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005190AC1052911986873941          
S/G/Y/R/B/O NT_005190AC0730661987404873WI-5185    2938.302AC024424, AC105291, AC024424, AC073066, AC105291
S/G/Y/R/B/O NT_005190AC1147891988624053          
S/G/Y/R/B/O NT_005190AC1048231988669213          
S/G/Y/R/B/O NT_005190AC0648341989115593          
S/G/Y/R/B/O NT_005190AC0132741990972733SGC30807    2941.901 AC013274
S/G/Y/R/B/O NT_005190AC0132741990972733RH567942613.69    1 AC013274
S/G/Y/R/B/O NT_005190AC0132741990994663RH692142601.63    1 AC013274
S/G/Y/R/B/O NT_005190AC0132741990997413RH38116  28737.00  1 AC013274
S/G/Y/R/B/O NT_005190AC0132741991765933RH570572607.60  2935.901 AC013274, AC021833
S/G/Y/R/B/O NT_005190AC0132741991766793RH929462613.71    1 AC013274, AC021833
S/G/Y/R/B/O NT_005190AC0689191992022213          
S/G/Y/R/B/O NT_005190AC1046001993645713          
S/G/Y/R/B/O NT_005190AC1147601995751961RH563572617.00  2943.201 AC114760
S/G/Y/R/B/O NT_005190AC1147601995752561RH164372615.78    1 AC114760
S/G/Y/R/B/O NT_005190AC1147601995765051RH655092616.95    1 AC114760
S/G/Y/R/B/O NT_005190AC0205711996336573RH1030512615.78    1 AC020571
S/G/Y/R/B/O NT_005190AC0205711997032433RH38022  28727.00  1 AC020571
S/G/Y/R/B/O NT_005190AC0205711997770773RH711512618.38    1 AC020571, AC068696
S/G/Y/R/B/O NT_005190AC0740901997835313          
S/G/Y/R/B/O NT_005190AC0739051999276803AFMB358YB1    2943.101 AC073905
S/G/Y/R/B/O NT_005190AC0933792000232603          
S/G/Y/R/B/O NT_005190AC0685442001412953RH679  28778.00  1 AC068544
S/G/Y/R/B/O NT_005190AC0124862002024033RH1028002617.00    1 AC080050
S/G/Y/R/B/O NT_005190AC0124862002031733RH121232617.00    1 AC012486, AC080050
S/G/Y/R/B/O NT_005190AC0124862002032463RH673192617.11    1 AC012486, AC080050
S/G/Y/R/B/O NT_005190AC0124862002034323RH703362617.11    1 AC012486, AC080050
S/G/Y/R/B/O NT_005190AC0124862002367393RH567022618.3828737.002944.701 AC012486, AC080050
S/G/Y/R/B/O NT_005190AC0124862002722003RH454732618.38    1 AC012486, AC080050
S/G/Y/R/B/O NT_005190AC0124862002747633RH564652618.38  2946.301 AC012486, AC080050
S/G/Y/R/B/O NT_005190AC0170352004259873RH271632625.46    1 AC017035
S/G/Y/R/B/O NT_005190AC0170352004260863RH37842  28737.00  1 AC017035
S/G/Y/R/B/O NT_005190AC0170352004278093RH30067  28727.00  1 AC017035
S/G/Y/R/B/O NT_005190AC0132642005353193RH943572617.11    1 AC013264
S/G/Y/R/B/O NT_005190AC0132642005358463RH1037492617.00    1 AC013264
S/G/Y/R/B/O NT_005190AC0132642005389563RH930132617.00    1 AC013264
S/G/Y/R/B/O NT_005190AC0132642005979193AFMA121YH1    2944.701 AC013264, AC079980
S/G/Y/R/B/O NT_005190AC0740922006921063RH568462618.9028753.00  1 AC074092, AC079980
S/G/Y/R/B/O NT_005190AC0740922006921063SGC34671    2951.401 AC074092, AC079980
S/G/Y/R/B/O NT_005190AC0107462008289703RH33548  28713.002946.901AC105249, AC010746, AC105249
S/G/Y/R/B/O NT_005190AC0107462008289703RH562072620.22    1AC105249, AC010746, AC105249
S/G/Y/R/B/O NT_005190AC0107462008291063RH163732619.01    1AC105249, AC010746, AC105249
S/G/Y/R/B/O NT_005190AC0107462008311873RH661522622.75    2AC012069, AC105249, AC010746, AC012069, AC105249
S/G/Y/R/B/O NT_005190AC0107462008371813RH98382618.48    1AC105249, AC010746, AC105249
S/G/Y/R/B/O NT_005190AC0107462008815893RH30046  28746.00  1AC105249, AC010746, AC105249
S/G/Y/R/B/O NT_005190AC1052492010339521          
S/G/Y/R/B/O NT_005190 - RH116172618.97    0  
S/G/Y/R/B/O NT_005190 - RH258032618.17    1AC092598, AC092598
S/G/Y/R/B/O NT_005190 - RH266912618.69    1AC017101, AC015585, AC017101
S/G/Y/R/B/O NT_005190 - RH471582618.38    1AC067945, AC067945


  NT_005190 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005190 - RH488802617.64    1AC012488, AC012488
S/G/Y/R/B/O NT_005190 - RH569382618.12    1AC013439, AC013439
S/G/Y/R/B/O NT_005190 - RH678742617.32    1AC067945, AC067945
S/G/Y/R/B/O NT_005190 - RH916302618.38    0AC067945, AC067945