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  Chromosome 2 - RH Maps - Single Contig
 

Chromosome 2 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005214
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005214AC073851174580561          
S/G/Y/R/B/O NT_005214AC018591174639761          
S/G/Y/R/B/O NT_005214AC092594176444023          
S/G/Y/R/B/O NT_005214AC097719178038733          
S/G/Y/R/B/O NT_005214AC012446178738783RH4573267.99  287.401 AC012446
S/G/Y/R/B/O NT_005214AC012446178738783RH30050  2592.00  1 AC012446
S/G/Y/R/B/O NT_005214AC012446179967173RH102378271.04    1AC073851, AC012446, AC073851
S/G/Y/R/B/O NT_005214AC018741180302073WI-5349    290.001AC073851, AC016391, AC018741, AC073851
S/G/Y/R/B/O NT_005214AC018741180827833RH102631267.89    1AC073851, AC016391, AC073851
S/G/Y/R/B/O NT_005214AC010096181801243WI-4146    290.001 AC010096, AC069283
S/G/Y/R/B/O NT_005214AC010096182071733WI-3182    289.401 AC010096, AC069283
S/G/Y/R/B/O NT_005214AC010096183305793RH31593  2597.00  1 AC010096
S/G/Y/R/B/O NT_005214AC019055184733833RH38572  2602.00  1 AC019055
S/G/Y/R/B/O NT_005214AC013400186084433RH45646270.62    1 AC013400
S/G/Y/R/B/O NT_005214AC013400186415273RH26621273.14    1 AC013400
S/G/Y/R/B/O NT_005214AC079145187235803RH102524269.81    1AC021877, AC021877, AC079145
S/G/Y/R/B/O NT_005214AC079145187357433RH12707273.14    1AC021877, AC021877, AC079145
S/G/Y/R/B/O NT_005214AC079145187638493RH56303267.992628.00287.401AC021877, AC021877, AC079145
S/G/Y/R/B/O NT_005214AC079145187638953RH17000275.01    1AC021877, AC021877, AC079145
S/G/Y/R/B/O NT_005214AC079145187639173RH25334273.14    1AC021877, AC021877, AC079145
S/G/Y/R/B/O NT_005214AC079145187640443RH17379273.14    1AC021877, AC021877, AC079145
S/G/Y/R/B/O NT_005214AC098828187822963          
S/G/Y/R/B/O NT_005214AC116171189077041          
S/G/Y/R/B/O NT_005214AC104792189320051RH67771271.85    1AC041029, AC116171, AC041029, AC104792, AC116171
S/G/Y/R/B/O NT_005214AC104792189326871RH17406274.10    1AC041029, AC116171, AC041029, AC104792, AC116171, Z48199
S/G/Y/R/B/O NT_005214AC104792189331021RH16622271.25    1AC041029, AC116171, AC041029, AC104792, AC116171, Z48199
S/G/Y/R/B/O NT_005214AC041029189582261          
S/G/Y/R/B/O NT_005214AC021877189650671          
S/G/Y/R/B/O NT_005214AC007041189735203RH388602285.75    2AC104792, AC116171, AL096701, AC007041, AC104792, AC116171, AL096701
S/G/Y/R/B/O NT_005214AC007041189801723RH48008270.62    1AC041029, AC104792, AC116171, AC007041, AC041029, AC104792, AC116171
S/G/Y/R/B/O NT_005214AC007041189826233RH12096270.10    1AC041029, AC104792, AC116171, AC007041, AC041029, AC104792, AC116171
S/G/Y/R/B/O NT_005214AC007041189826643RH10597275.01    1AC041029, AC104792, AC116171, AC007041, AC041029, AC104792, AC116171
S/G/Y/R/B/O NT_005214AC007041189828353RH25440275.01    1AC041029, AC104792, AC116171, AC007041, AC041029, AC104792, AC116171
S/G/Y/R/B/O NT_005214AC007041189832873RH12262276.38    1AC041029, AC104792, AC116171, AC007041, AC041029, AC104792, AC116171
S/G/Y/R/B/O NT_005214AC007041189838623RH57134270.102643.00290.801AC041029, AC104792, AC116171, AC007041, AC041029, AC104792, AC116171
S/G/Y/R/B/O NT_005214AC007041190084563RH79823272.60    1AC041029, AC104792, AC007041, AC041029, AC104792
S/G/Y/R/B/O NT_005214AC007041190257483RH65893275.01    1AC041029, AC104792, AC007041, AC041029, AC104792
S/G/Y/R/B/O NT_005214AC007041190658603RH31594  2648.00  1AC041029, AC104792, AC007041, AC041029, AC104792
S/G/Y/R/B/O NT_005214AC007041190833093RH56994270.62  291.601 AC007041
S/G/Y/R/B/O NT_005214AC023137191591953GCT11G10    293.001 AC023137
S/G/Y/R/B/O NT_005214AC023137191816903RH66820270.73    1 AC019034, AC023137
S/G/Y/R/B/O NT_005214AC023137191830033RH44304270.91    1 AC019034, AC023137
S/G/Y/R/B/O NT_005214AC023137191833553RH16017276.38    1 AC023137
S/G/Y/R/B/O NT_005214AC023137192098773WI-17141    298.001 AC019034, AC023137
S/G/Y/R/B/O NT_005214AC023137192098773RH56380276.38    1 AC019034, AC023137
S/G/Y/R/B/O NT_005214AC012065193516063RH56247270.83  291.601 AC012065, AC019034
S/G/Y/R/B/O NT_005214AC012065193516063RH33291  2717.00  1 AC012065, AC019034
S/G/Y/R/B/O NT_005214AC012065193559833RH103358271.85    1 AC012065, AC019034
S/G/Y/R/B/O NT_005214AC012065194067873RH47965272.18    1AC023124, AC012065, AC023124
S/G/Y/R/B/O NT_005214AC012065194083683RH68766278.26    1AC023124, AC012065, AC023124


  NT_005214 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005214AC012065194121653RH33045  2623.00299.001AC023124, AC012065, AC023124
S/G/Y/R/B/O NT_005214AC012065194121653RH56821276.28    1AC023124, AC012065, AC023124
S/G/Y/R/B/O NT_005214AC012065194123003RH16418278.05    1AC023124, AC012065, AC023124
S/G/Y/R/B/O NT_005214AC012065194181773RH32885  2642.00299.301AC023124, AC012065, AC023124
S/G/Y/R/B/O NT_005214AC012065194181773RH56376278.26    1AC023124, AC012065, AC023124
S/G/Y/R/B/O NT_005214AC012065194183453RH44584274.48    1AC023124, AC012065, AC023124
S/G/Y/R/B/O NT_005214AC012065194191223RH99120273.24    1AC023124, AC012065, AC023124
S/G/Y/R/B/O NT_005214AC023124194221071          
S/G/Y/R/B/O NT_005214AC012361194512583AFMA070ZA9    297.901AC023124, AC012361, AC023124
S/G/Y/R/B/O NT_005214AC012361194605073RH66466276.98    1AC023124, AC012361, AC023124
S/G/Y/R/B/O NT_005214AC012361194694973RH65141278.26    1AC023124, AC012361, AC023124
S/G/Y/R/B/O NT_005214AC012361195120793WI-11147    297.001AC023124, AC012361, AC023124
S/G/Y/R/B/O NT_005214AC012361195294123AFMB293ZC9    296.101AC023124, AC012361, AC023124
S/G/Y/R/B/O NT_005214 - RH102267262.32    0  
S/G/Y/R/B/O NT_005214 - CHLC.GATA23G07    270.001AC010880, AC010880
S/G/Y/R/B/O NT_005214 - RH102510274.69    1AC080094, AC080094
S/G/Y/R/B/O NT_005214 - AFMB313ZH5    272.302AC008282, AC068223, AC008282, AC068223
S/G/Y/R/B/O NT_005214 - RH102895264.23    1AC079148, AC079148
S/G/Y/R/B/O NT_005214 - SGC34976    273.600AC010145, AC010145
S/G/Y/R/B/O NT_005214 - RH103440264.23    1AC090499, AC093731, AC090499, AC093731
S/G/Y/R/B/O NT_005214 - RH103703265.61    1AC093731, AC093731
S/G/Y/R/B/O NT_005214 - RH104391266.01    1AC097531, AC097531
S/G/Y/R/B/O NT_005214 - RH12036274.10    1AC093731, AC093731
S/G/Y/R/B/O NT_005214 - RH12241274.74    1AC008282, AC008282
S/G/Y/R/B/O NT_005214 - RH12863274.91    1AC008073, AC008073
S/G/Y/R/B/O NT_005214 - RH18351267.99    0  
S/G/Y/R/B/O NT_005214 - RH42637264.232577.00  1AC079148, AC079148
S/G/Y/R/B/O NT_005214 - RH30730  2693.00  1AC016768, AC016768
S/G/Y/R/B/O NT_005214 - RH32915  2642.00  1AC055811, AC055811
S/G/Y/R/B/O NT_005214 - RH422  2565.00  1AC079802, AC093624, AC079802, AC093624
S/G/Y/R/B/O NT_005214 - RH56174267.69  273.700AC019055, AC019055
S/G/Y/R/B/O NT_005214 - RH56192273.03  273.701AC097377, AC097377
S/G/Y/R/B/O NT_005214 - RH56556275.01    1AC009242, AC009242
S/G/Y/R/B/O NT_005214 - WI-10844    274.401AC099344, AC099344
S/G/Y/R/B/O NT_005214 - RH56880274.69    1AC008073, AC008073
S/G/Y/R/B/O NT_005214 - WI-5509    276.901AC008271, AC008271
S/G/Y/R/B/O NT_005214 - WI-2868    280.101AC097531, AC097531
S/G/Y/R/B/O NT_005214 - WI-3767    282.101AC097531, AC097531
S/G/Y/R/B/O NT_005214 - RH56903262.02  290.301AC097377, AC097377
S/G/Y/R/B/O NT_005214 - RH65969264.13    1AC093731, AC093731
S/G/Y/R/B/O NT_005214 - RH67770262.08    1AC097377, AC097377
S/G/Y/R/B/O NT_005214 - RH68417264.23    1AC079148, AC079148
S/G/Y/R/B/O NT_005214 - RH71158274.16    1AC097377, AC097377
S/G/Y/R/B/O NT_005214 - RH92622264.33    1AC079148, AC079148
S/G/Y/R/B/O NT_005214 - RH93362262.08    0  
S/G/Y/R/B/O NT_005214 - RH93819270.62    0  
S/G/Y/R/B/O NT_005214 - RH94239262.08    1AC097377, AC097377
S/G/Y/R/B/O NT_005214 - RH98590274.31    1AC009829, AC010745, AC062006, AC009829, AC010745, AC062006
S/G/Y/R/B/O NT_005214 - RH99272265.61    0AC079148, AC079148