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  Chromosome 2 - RH Maps - Single Contig
 

Chromosome 2 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005414
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005414AC1147292373038511          
S/G/Y/R/B/O NT_005414AC0931092373181521          
S/G/Y/R/B/O NT_005414AC0137262373535583RH680492722.50    1AC114729, AC013726, AC114729
S/G/Y/R/B/O NT_005414AC0137262373536783RH683372722.50    1AC114729, AC013726, AC114729
S/G/Y/R/B/O NT_005414AC0137262373540053RH265782725.01    1AC114729, AC013726, AC114729
S/G/Y/R/B/O NT_005414AC0137262373540573RH703632722.50    1AC114729, AC013726, AC114729
S/G/Y/R/B/O NT_005414AC0137262373854563RH30791  29716.00  1AC114729, AC013726, AC114729
S/G/Y/R/B/O NT_005414AC0137262374396803RH285662724.30    1AC093109, AC114729, AC013726, AC093109, AC114729
S/G/Y/R/B/O NT_005414AC0137262374396823RH571492728.63  21067.401AC093109, AC114729, AC013726, AC093109, AC114729
S/G/Y/R/B/O NT_005414AC0137262374413033RH561902720.88  21064.701AC093109, AC114729, AC013726, AC093109, AC114729
S/G/Y/R/B/O NT_005414AC0137262374928243RH712552722.50    1AC093109, AC013726, AC093109
S/G/Y/R/B/O NT_005414AC0137262374929103RH180862722.50    1AC093109, AC013726, AC093109
S/G/Y/R/B/O NT_005414AC0137262374929233RH125822722.50    1AC093109, AC013726, AC093109
S/G/Y/R/B/O NT_005414AC0137262375237043RH563982722.50    1AC093109, AC013726, AC093109
S/G/Y/R/B/O NT_005414AC0137262375237043SGC34781    21063.301AC093109, AC013726, AC093109
S/G/Y/R/B/O NT_005414AC0192212376158103RH566412724.30    1AC093109, AC019221, AC093109
S/G/Y/R/B/O NT_005414AC0192212376158103WI-13370    21064.701AC093109, AC019221, AC093109
S/G/Y/R/B/O NT_005414AC0192212376176543RH567642722.60    1AC093109, AC019221, AC093109
S/G/Y/R/B/O NT_005414AC0192212376176543SGC31815    21063.001AC093109, AC019221, AC093109
S/G/Y/R/B/O NT_005414AC0192212376178053RH253672722.50    1AC093109, AC019221, AC093109
S/G/Y/R/B/O NT_005414AC0192212376180273RH255452722.60    1AC093109, AC019221, AC093109
S/G/Y/R/B/O NT_005414AC0192212376216363RH797072722.50    1AC093109, AC019221, AC093109
S/G/Y/R/B/O NT_005414AC0192212376219453RH1021302722.60    1AC093109, AC019221, AC093109
S/G/Y/R/B/O NT_005414AC0190722377004203RH655572727.51    1 AC019072
S/G/Y/R/B/O NT_005414AC1148122378598401RH691902722.89    4AC026497, AC026497, AC026497, AC026497, AC026497, AC026497, AC114812, AC114812, AC114812, AC114812, AF297093, AF297093, AF297093, AF297093
S/G/Y/R/B/O NT_005414AC1148122378656691RH691902722.89    4AC026497, AC026497, AC026497, AC026497, AC026497, AC026497, AC114812, AC114812, AC114812, AC114812, AF297093, AF297093, AF297093, AF297093
S/G/Y/R/B/O NT_005414AC1148122378798931RH691902722.89    4AC026497, AC026497, AC026497, AC026497, AC026497, AC026497, AC114812, AC114812, AC114812, AC114812, AF297093, AF297093, AF297093, AF297093
S/G/Y/R/B/O NT_005414AC1148122378979791RH691902722.89    4AC026497, AC026497, AC026497, AC026497, AC026497, AC026497, AC114812, AC114812, AC114812, AC114812, AF297093, AF297093, AF297093, AF297093
S/G/Y/R/B/O NT_005414AC0264972378703761          
S/G/Y/R/B/O NT_005414AC0069852379195623RH483022729.25    1AC026497, AC114812, AC006985, AC026497, AC114812, AF297093
S/G/Y/R/B/O NT_005414AC0069852379227383RH689702722.30    1AC026497, AC114812, AC006985, AC026497, AC114812, AF297093
S/G/Y/R/B/O NT_005414AC0069852379228113RH563332729.25  21067.301AC026497, AC114812, AC006985, AC026497, AC114812, AF297093
S/G/Y/R/B/O NT_005414AC0055382379873713RH568092729.25    1AC026497, AC026497
S/G/Y/R/B/O NT_005414AC0055382379873713SGC33393    21068.601AC026497, AC026497
S/G/Y/R/B/O NT_005414AC0055382379873713RH32756  29691.00  1AC026497, AC026497
S/G/Y/R/B/O NT_005414AC0060372382028073RH570832719.44  21069.001AC027778, AC006037, AC027778, AJ272265
S/G/Y/R/B/O NT_005414AC0060372382267913RH166092720.28    1AC027778, AC006037, AC027778, AJ272265
S/G/Y/R/B/O NT_005414AC0060372382288193RH684652720.28    1AC027778, AC006037, AC027778
S/G/Y/R/B/O NT_005414AC0060372382289563RH673672731.08    1AC027778, AC006037, AC027778
S/G/Y/R/B/O NT_005414AC0060372382321913RH32883  28935.00  1AC027778, AC006037, AC027778
S/G/Y/R/B/O NT_005414AC0060372382482133RH704062720.38    1AC027778, AC006037, AC027778
S/G/Y/R/B/O NT_005414AC0063272382781083          
S/G/Y/R/B/O NT_005414AC0277782383709131          
S/G/Y/R/B/O NT_005414 - RH128392727.51    1AC016692, AC016692
S/G/Y/R/B/O NT_005414 - RH135852727.51    1AC106876, AC106876
S/G/Y/R/B/O NT_005414 - RH562842724.70    1AC114814, AC114814
S/G/Y/R/B/O NT_005414 - RH562882728.70    0AC006037, AC006037, AJ272265
S/G/Y/R/B/O NT_005414 - RH564262728.63    1AC012033, AC092165, AC093383, AC012033, AC074188, AC092165, AC093383
S/G/Y/R/B/O NT_005414 - RH565042724.70    1AC010148, AC010148
S/G/Y/R/B/O NT_005414 - RH566912724.70    1AC114814, AC114814


  NT_005414 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005414 - RH568022727.61    1AC073254, AC073254
S/G/Y/R/B/O NT_005414 - RH570892727.61    1AC068134, AC068134, AC074188, AF307337
S/G/Y/R/B/O NT_005414 - RH570962727.51    1AC073254, AC073254
S/G/Y/R/B/O NT_005414 - RH927902727.51    1AC016692, AC106876, AC016692, AC106876
S/G/Y/R/B/O NT_005414 - RH942902724.34    0