Chromosome 2 - RH Maps - Single Contig

Chromosome 2 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_033005	NT_022221	NT_022139	NT_022270	NT_022194	NT_022327	NT_005334	NT_033008
NT_033000	NT_005214	NT_033002	NT_022227	NT_015926	NT_005204	NT_030589	NT_005367
NT_015120	NT_026239	NT_005389	NT_005399	NT_005375	NT_032985	NT_032982	NT_032996
NT_033007	NT_033006	NT_032984	NT_032999	NT_022354	NT_033004	NT_022184	NT_005322
NT_022143	NT_015805	NT_033003	NT_032992	NT_029235	NT_032994	NT_022300	NT_026970
NT_032987	NT_022171	NT_032997	NT_005429	NT_005224	NT_029895	NT_022240	NT_031762
NT_032990	NT_019306	NT_026982	NT_030595	NT_022222	NT_029927	NT_005079	NT_022135
NT_032991	NT_022140	NT_029911	NT_028068	NT_030590	NT_005058	NT_029926	NT_005129
NT_022172	NT_005273	NT_005435	NT_005151	NT_031761	NT_022154	NT_005343	NT_005332
NT_025652	NT_032998	NT_005265	NT_005031	NT_022339	NT_030600	NT_022197	NT_005483
NT_005062	NT_022155	NT_032995	NT_005190	NT_030603	NT_005417	NT_028103	NT_033001
NT_005037	NT_005229	NT_005370	NT_005034	NT_005078	NT_005486	NT_031748	NT_005337
NT_005403	NT_032986	NT_022115	NT_005414	NT_022315	NT_005120	NT_022173	NT_022388
NT_005416	NT_005472	NT_022250	NT_032981	NT_026250

NT_022227

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_022227	AC115619	19823414	3	RH102829	2	75.53					1		AC115619
S/G/Y/R/B/O	NT_022227	AC115619	19825339	3	RH1777			2	720.00			1		AC115619
S/G/Y/R/B/O	NT_022227	AC115619	19825527	3	RH69077	2	80.21					1		AC115619, M19828
S/G/Y/R/B/O	NT_022227	AC115619	19826887	3	RH70147	2	80.21					1		AC115619, M19828
S/G/Y/R/B/O	NT_022227	AC115619	19828188	3	RH56293	2	76.98	2	725.00	2	99.30	1		AC115619, M19828
S/G/Y/R/B/O	NT_022227	AC010872	19829141	3	RH56839	2	80.21	2	715.00	2	101.10	1	AC115619,	AC010872, AC115619, M19828
S/G/Y/R/B/O	NT_022227	AC010872	19831057	3	RH80663	2	75.11					1		AC010872, M19828
S/G/Y/R/B/O	NT_022227	AC010872	19832194	3	RH56852	2	80.21	2	715.00	2	101.10	1		AC010872, M19828
S/G/Y/R/B/O	NT_022227	AC010872	19832194	3	RH70400	2	79.91					1		AC010872, M19828
S/G/Y/R/B/O	NT_022227	AC010872	19833773	3	RH56730	2	75.16	2	725.00			1		AC010872, M19828
S/G/Y/R/B/O	NT_022227	AC010872	19833773	3	WI-7669					2	96.70	1		AC010872, M19828
S/G/Y/R/B/O	NT_022227	AC010872	19834167	3	RH17568	2	80.21					1		AC010872, M19828
S/G/Y/R/B/O	NT_022227	AC010872	19834728	3	RH69778	2	79.91					1		AC010872, M19828
S/G/Y/R/B/O	NT_022227	AC010872	19838903	3	RH68973	2	80.21					1		AC010872, J04838, M19828
S/G/Y/R/B/O	NT_022227	AC010872	19840376	3	RH68521	2	80.21					1		AC010872
S/G/Y/R/B/O	NT_022227	AC010872	19861299	3	RH56262	2	75.16					1		AC010872
S/G/Y/R/B/O	NT_022227	AC010872	19861299	3	SGC34589					2	129.00	1		AC010872
S/G/Y/R/B/O	NT_022227	AC067959	20018166	3
S/G/Y/R/B/O	NT_022227	AC096722	20076996	3
S/G/Y/R/B/O	NT_022227	AC011752	20176914	3	RH42694	2	82.34					1		AC011752
S/G/Y/R/B/O	NT_022227	AC011752	20226844	3	RH102711	2	75.21					1		AC011752
S/G/Y/R/B/O	NT_022227	AC009496	20238419	3
S/G/Y/R/B/O	NT_022227	AC009411	20391914	3	RH56587	2	75.85	2	700.00	2	100.10	1		AC009411
S/G/Y/R/B/O	NT_022227	AC009411	20415253	3	WI-10338					7	646.90	1		AC009411
S/G/Y/R/B/O	NT_022227	AC009411	20462230	3	RH92110	2	75.21					1		AC009411, AC084349
S/G/Y/R/B/O	NT_022227	AC009411	20493550	3	WI-7512					2	105.30	1		AC009411, AC084349
S/G/Y/R/B/O	NT_022227	AC018742	20545683	3	CHLC.ATC5A09					2	105.30	1		AC018742, AC084349
S/G/Y/R/B/O	NT_022227	AC068490	20679991	3
S/G/Y/R/B/O	NT_022227	AC093812	20834891	3
S/G/Y/R/B/O	NT_022227	AC068044	20857935	3
S/G/Y/R/B/O	NT_022227	AC116176	21038362	1
S/G/Y/R/B/O	NT_022227	AC099799	21075475	3
S/G/Y/R/B/O	NT_022227	AC096570	21310407	3	WI-11160					2	129.10	1		AC096570
S/G/Y/R/B/O	NT_022227	AC096570	21355269	3	WI-5693					2	111.00	1		AC096570
S/G/Y/R/B/O	NT_022227	AC096561	21519263	3	WI-3742					2	120.50	1		AC096561
S/G/Y/R/B/O	NT_022227	AC074233	21551386	3	AFMB353WF1					2	116.70	1		AC074233
S/G/Y/R/B/O	NT_022227	AC110300	21591809	3
S/G/Y/R/B/O	NT_022227	AC104080	21683704	1
S/G/Y/R/B/O	NT_022227		-		RH36238	2	78.26					1	AC016768,	AC016768, AC068572, AC105317
S/G/Y/R/B/O	NT_022227		-		RH36795	2	75.27					1	AC008073,	AC008073
S/G/Y/R/B/O	NT_022227		-		RH45452	2	79.81					0
S/G/Y/R/B/O	NT_022227		-		RH56161	2	76.98					1	AC104807,	AC068572, AC104807, AC105317
S/G/Y/R/B/O	NT_022227		-		RH56165	2	75.32					1	AC009242,	AC009242
S/G/Y/R/B/O	NT_022227		-		RH56444	2	75.91					1	AC009242,	AC009242
S/G/Y/R/B/O	NT_022227		-		RH56495	2	75.64					1	AC008073,	AC008073
S/G/Y/R/B/O	NT_022227		-		RH56500	2	75.59					1	AC012073,	AC012073
S/G/Y/R/B/O	NT_022227		-		RH98470	2	75.42					1	AC018467,	AC018467