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  Chromosome 2 - RH Maps - Single Contig
 

Chromosome 2 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_005416
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005416AC1102992444328101WI-19287    21076.601 AC110299
S/G/Y/R/B/O NT_005416AC1102992444328101RH565662741.40    1 AC110299
S/G/Y/R/B/O NT_005416AC1102992444328601RH470492741.50    1 AC110299
S/G/Y/R/B/O NT_005416AC1102992444333871RH565862741.50  21079.801 AC110299
S/G/Y/R/B/O NT_005416AC1102992444346911WI-15301    21079.801 AC110299
S/G/Y/R/B/O NT_005416AC1102992444346911RH567922741.35    1 AC110299
S/G/Y/R/B/O NT_005416AC1102992444347081RH107302744.74    1 AC110299
S/G/Y/R/B/O NT_005416AC1102992444475911RH123772741.50    1 AC005104, AC110299
S/G/Y/R/B/O NT_005416AC1102992444492271RH562482741.50210223.0021079.301 AC005104, AC110299
S/G/Y/R/B/O NT_005416AC1102992444735861RH943462741.91    1 AC005104, AC110299
S/G/Y/R/B/O NT_005416AC1102992444811851RH123322744.74    1 AC005104, AC110299
S/G/Y/R/B/O NT_005416AC1102992444815421RH689502744.74    1 AC005104, AC110299
S/G/Y/R/B/O NT_005416AC1102992444822511RH571142741.91  21079.601 AC005104, AC110299
S/G/Y/R/B/O NT_005416AC1102992444830821RH119822744.74    1 AC005104, AC110299
S/G/Y/R/B/O NT_005416AC1102992444830931RH256032744.94    1 AC005104, AC110299
S/G/Y/R/B/O NT_005416AC1102992445029291RH463882744.74    1 AC005104, AC110299
S/G/Y/R/B/O NT_005416AC1048412445744301RH105182744.74    1 AC005104, AC104841
S/G/Y/R/B/O NT_005416AC1048412445746101RH2106  210290.00  1 AC005104, AC104841
S/G/Y/R/B/O NT_005416AC1048412445746111RH561482744.74  21079.501 AC005104, AC104841
S/G/Y/R/B/O NT_005416AC1048412445757801RH7993  210200.00  1 AC005104, AC104841
S/G/Y/R/B/O NT_005416AC1048412445818631RH179452744.74    1 AC104841
S/G/Y/R/B/O NT_005416AC1048412445882351RH1291  210200.00  1 AC104841
S/G/Y/R/B/O NT_005416AC1048412446103411RH361962744.94    1 AC104841
S/G/Y/R/B/O NT_005416AC1048412446885191RH565322744.74  21079.501AC111201, AC016366, AC104841, AC111201
S/G/Y/R/B/O NT_005416AC1048412446901021RH1044642744.74    1AC111201, AC016366, AC104841, AC111201
S/G/Y/R/B/O NT_005416AC1048412446987441RH1430  210236.00  1AC111201, AC016366, AC104841, AC111201
S/G/Y/R/B/O NT_005416AC1048412446987751RH115022744.74    1AC111201, AC016366, AC104841, AC111201
S/G/Y/R/B/O NT_005416AC1048412446989881RH97912744.74    1AC111201, AC016366, AC104841, AC111201
S/G/Y/R/B/O NT_005416AC1048412447008971RH167592744.74    1AC111201, AC016366, AC104841, AC111201
S/G/Y/R/B/O NT_005416AC1048412447011201RH470302744.74    1AC111201, AC016366, AC104841, AC111201
S/G/Y/R/B/O NT_005416AC1048412447049201RH566082744.94210190.0021079.501AC111201, AC016366, AC104841, AC111201
S/G/Y/R/B/O NT_005416AC1048412447049201RH687372744.74    1AC111201, AC016366, AC104841, AC111201
S/G/Y/R/B/O NT_005416AC1048092449843191RH362992742.01    1 AC104809
S/G/Y/R/B/O NT_005416AC1048092450117021RH564462742.01  21076.301 AC104809
S/G/Y/R/B/O NT_005416AC1048092450555631RH686912742.01    1 AC104809
S/G/Y/R/B/O NT_005416AC1048092450629661RH649762742.01    1 AC104809
S/G/Y/R/B/O NT_005416AC1112012447225331          
S/G/Y/R/B/O NT_005416AC0052372447567923RH561762744.74  21079.501AC111201, AC005237, AC016366, AC111201
S/G/Y/R/B/O NT_005416AC0052372447569083RH660162744.74    1AC111201, AC005237, AC016366, AC111201
S/G/Y/R/B/O NT_005416AC0052372447574273RH7955  210200.00  1AC111201, AC005237, AC111201
S/G/Y/R/B/O NT_005416AC0052372447574853RH101842744.94    1AC111201, AC005237, AC111201
S/G/Y/R/B/O NT_005416AC0052372447623323RH657082744.74    1AC111201, AC005237, AC016366, AC111201
S/G/Y/R/B/O NT_005416AC0052372447876893RH686102741.81    1AC111201, AC005237, AC016366, AC106044, AC111201
S/G/Y/R/B/O NT_005416AC0052372448340223RH562582741.81210185.0021077.501AC111201, AC005237, AC016366, AC111201
S/G/Y/R/B/O NT_005416AC0052372448451043RH939312742.01    1AC111201, AC005237, AC106044, AC111201
S/G/Y/R/B/O NT_005416AC0052372448475753RH368142742.01    1 AC005237
S/G/Y/R/B/O NT_005416AC0052372448475803RH562402742.01  21077.501AC111201, AC005237, AC111201
S/G/Y/R/B/O NT_005416AC0052372448530383RH123282742.01    1AC111201, AC005237, AC111201
S/G/Y/R/B/O NT_005416AC0052372448530833RH99822742.01    1AC111201, AC005237, AC111201
S/G/Y/R/B/O NT_005416AC0935852449064123          


  NT_005416 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005416 - D2S125    21076.700  
S/G/Y/R/B/O NT_005416 - WI-10419    21077.200AC025684, AC025684
S/G/Y/R/B/O NT_005416 - RH132462743.33210143.00  0  
S/G/Y/R/B/O NT_005416 - RH7829  210211.00  0  
S/G/Y/R/B/O NT_005416 - RH839  210161.00  1AC011298, AC011298
S/G/Y/R/B/O NT_005416 - RH8962  210229.00  0