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  Chromosome 2 - RH Maps - Single Contig
 

Chromosome 2 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033005 NT_022221 NT_022139 NT_022270 NT_022194 NT_022327 NT_005334 NT_033008
NT_033000 NT_005214 NT_033002 NT_022227 NT_015926 NT_005204 NT_030589 NT_005367
NT_015120 NT_026239 NT_005389 NT_005399 NT_005375 NT_032985 NT_032982 NT_032996
NT_033007 NT_033006 NT_032984 NT_032999 NT_022354 NT_033004 NT_022184 NT_005322
NT_022143 NT_015805 NT_033003 NT_032992 NT_029235 NT_032994 NT_022300 NT_026970
NT_032987 NT_022171 NT_032997 NT_005429 NT_005224 NT_029895 NT_022240 NT_031762
NT_032990 NT_019306 NT_026982 NT_030595 NT_022222 NT_029927 NT_005079 NT_022135
NT_032991 NT_022140 NT_029911 NT_028068 NT_030590 NT_005058 NT_029926 NT_005129
NT_022172 NT_005273 NT_005435 NT_005151 NT_031761 NT_022154 NT_005343 NT_005332
NT_025652 NT_032998 NT_005265 NT_005031 NT_022339 NT_030600 NT_022197 NT_005483
NT_005062 NT_022155 NT_032995 NT_005190 NT_030603 NT_005417 NT_028103 NT_033001
NT_005037 NT_005229 NT_005370 NT_005034 NT_005078 NT_005486 NT_031748 NT_005337
NT_005403 NT_032986 NT_022115 NT_005414 NT_022315 NT_005120 NT_022173 NT_022388
NT_005416 NT_005472 NT_022250 NT_032981 NT_026250


  NT_022197
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022197AC0191781930025453WI-4167    2931.701 AC019178
S/G/Y/R/B/O NT_022197AC0966501930947533          
S/G/Y/R/B/O NT_022197AC0731201931264693          
S/G/Y/R/B/O NT_022197AC0106791932814903RH941942615.78    1 AC010679, AC037444
S/G/Y/R/B/O NT_022197AC0106791932900543RH158712605.07    1 AC010679
S/G/Y/R/B/O NT_022197AC0106791932945013RH37799  28641.00  1 AC010679, AC037444
S/G/Y/R/B/O NT_022197AC0106791932946593RH693722605.07    1 AC010679, AC037444
S/G/Y/R/B/O NT_022197AC0106791932946803RH1219  28641.00  1 AC010679, AC037444
S/G/Y/R/B/O NT_022197AC0106791932948313RH935972607.50    1 AC010679, AC037444
S/G/Y/R/B/O NT_022197AC0106791932955643WI-19955    2938.701 AC010679, AC037444
S/G/Y/R/B/O NT_022197AC0106791932955643RH570972615.78    1 AC010679, AC037444
S/G/Y/R/B/O NT_022197AC0106791932964513RH939432614.10    1 AC010679, AC037444
S/G/Y/R/B/O NT_022197AC0921781933827713RH163992605.07    1 AC013698, AC037444, AC092178
S/G/Y/R/B/O NT_022197AC0921781934199593RH1035212605.07    1 AC013698, AC037444, AC092178
S/G/Y/R/B/O NT_022197AC0921781934628233RH176072607.50    1 AC013698, AC092178, AF141325
S/G/Y/R/B/O NT_022197AC0933881935929483RH562912603.26  2934.601 AC093388
S/G/Y/R/B/O NT_022197AC0933881935935543RH561862607.60  2935.201 AC093388
S/G/Y/R/B/O NT_022197AC0933881935937393RH672812602.96    1 AC093388
S/G/Y/R/B/O NT_022197AC0933881935986693RH936552602.96    1 AC093388
S/G/Y/R/B/O NT_022197AC1080471936313781          
S/G/Y/R/B/O NT_022197AC0064601936826953WI-13672    2937.001AC108047, AC006460, AC108047
S/G/Y/R/B/O NT_022197AC0064601936826953RH570152614.62    1AC108047, AC006460, AC108047
S/G/Y/R/B/O NT_022197AC0064601937741163RH682952603.26    1AC108047, AC006460, AC108047
S/G/Y/R/B/O NT_022197AC0064601937831263RH185072603.26    1AC108047, AF035396, AC006460, AC108047, AF035396, AL354753, AL391243
S/G/Y/R/B/O NT_022197AC0064601937837383WI-14899    2938.501AC108047, AC006460, AC108047
S/G/Y/R/B/O NT_022197AC0064601937837383RH571172614.41    1AC108047, AC006460, AC108047
S/G/Y/R/B/O NT_022197AC0064601937844523RH566192607.60  2935.201AC108047, AC006460, AC108047
S/G/Y/R/B/O NT_022197AC0064601937846213RH571182608.01  2935.901AC108047, AF035396, AC006460, AC108047, AF035396, AL354753, AL391243
S/G/Y/R/B/O NT_022197AC0064601938340013D2S118    2935.101 AC006460
S/G/Y/R/B/O NT_022197AC0064601938340013RH132162603.2628651.00  1 AC006460
S/G/Y/R/B/O NT_022197AC0055401939273523CHLC.GATA71C07    2937.201 AC005540
S/G/Y/R/B/O NT_022197AC0791621940078243          
S/G/Y/R/B/O NT_022197AC0679451940251053RH805992616.06    1 AC067945
S/G/Y/R/B/O NT_022197AC0679451940268963RH471582618.38    1 AC067945
S/G/Y/R/B/O NT_022197AC0679451940332953RH937982616.69    1 AC067945
S/G/Y/R/B/O NT_022197AC0679451940454993RH678742617.32    1 AC067945
S/G/Y/R/B/O NT_022197AC0679451940566433WI-10639    2937.201 AC067945
S/G/Y/R/B/O NT_022197AC0679451940569203RH940682603.26    1 AC067945
S/G/Y/R/B/O NT_022197AC0679451940572533RH124342609.25    1 AC067945
S/G/Y/R/B/O NT_022197AC0679451940575043RH256022608.42    1 AC067945
S/G/Y/R/B/O NT_022197AC0679451940575233RH102832603.26    1 AC067945
S/G/Y/R/B/O NT_022197AC0679451940679263RH362882616.69    1 AC067945
S/G/Y/R/B/O NT_022197AC0679451941218553RH178782603.26    1 AC067945, AF423072
S/G/Y/R/B/O NT_022197AC0797771942457003RH694472603.26    1 AC079777
S/G/Y/R/B/O NT_022197AC0926141943781533RH704762603.26    1 AC092614
S/G/Y/R/B/O NT_022197AC0926141943916763RH33672  28683.00  1 AC092614
S/G/Y/R/B/O NT_022197 - RH134602605.17    1AC023430, AC023430
S/G/Y/R/B/O NT_022197 - RH260942607.50    1AC098617, AC098617
S/G/Y/R/B/O NT_022197 - RH420872607.50    0  
S/G/Y/R/B/O NT_022197 - RH458622609.25    1AC098872, AC098872


  NT_022197 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022197 - RH563222609.25    1AC098872, AC098872
S/G/Y/R/B/O NT_022197 - RH563302607.50    1AC098872, AC098872
S/G/Y/R/B/O NT_022197 - RH566572605.07    1AC098872, AC098872
S/G/Y/R/B/O NT_022197 - RH570572607.60  2935.901AC013274, AC013274, AC021833
S/G/Y/R/B/O NT_022197 - RH665522607.50    1AC098872, AC098872
S/G/Y/R/B/O NT_022197 - RH674472607.50    0