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  Chromosome 10 - RH Maps - Single Contig
 

Chromosome 10 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_033229
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033229AL1387621012849463RH8028510477.24    1 AC006100, AL138762, AL589862
S/G/Y/R/B/O NT_033229AL1387621013709983RH9240810477.54    1 AL138762
S/G/Y/R/B/O NT_033229AL1332151014222613RH2565310478.66    1 AL133215
S/G/Y/R/B/O NT_033229AL1332151014250423RH10273110478.56    1 AL133215
S/G/Y/R/B/O NT_033229AL1332151014254943RH9210410478.66    1 AL133215
S/G/Y/R/B/O NT_033229AL1332151014427323RH5111410487.48  10578.701 AL133215
S/G/Y/R/B/O NT_033229AL1332151014427323RH74546  104833.00  1 AL133215
S/G/Y/R/B/O NT_033229AL1332151014429743RH7674710482.20    1 AL133215
S/G/Y/R/B/O NT_033229AL1332151014436133RH4013510478.66    1 AL133215
S/G/Y/R/B/O NT_033229AL1332151014436513RH2581610483.85    1 AL133215
S/G/Y/R/B/O NT_033229AL1332151014513863RH5119010488.42104809.0010579.301 AL133215
S/G/Y/R/B/O NT_033229AL1332151014649603RH9297210478.66    1 AL133215
S/G/Y/R/B/O NT_033229AL1332151014962213RH5138610487.69  10575.501 AL133215
S/G/Y/R/B/O NT_033229AL1332151014962583RH4751810478.63    1 AL133215
S/G/Y/R/B/O NT_033229AL1332151014968913RH1731810478.63    1 AL133215
S/G/Y/R/B/O NT_033229AL1332151014983543RH9818010478.66    1 AL133215
S/G/Y/R/B/O NT_033229AL1332151014983773RH998310482.20    1 AL133215
S/G/Y/R/B/O NT_033229AL1332151015007633RH10413810482.20    1 AL133215
S/G/Y/R/B/O NT_033229AL3573951015942523RH5106910482.26  10567.901 AL357395
S/G/Y/R/B/O NT_033229AL3573951015947193RH1771810478.63    1 AJ009794, AL357395
S/G/Y/R/B/O NT_033229AL1357941016729473RH5107210488.42  10579.301 AL135794
S/G/Y/R/B/O NT_033229AL1333871016959373RH9227910482.26    1 AL133387
S/G/Y/R/B/O NT_033229AL1333871017485933RH10336910482.20    1 AL133387
S/G/Y/R/B/O NT_033229AL1333871017485933RH9389010482.26    1 AL133387
S/G/Y/R/B/O NT_033229AL1333871017689433RH5115810478.66  10567.901 AL133387, AL445304
S/G/Y/R/B/O NT_033229AL1333871017690623RH4443310482.20    1 AL133387, AL445304
S/G/Y/R/B/O NT_033229AL1333871017939383WI-5502    10567.901 AL133387, AL445304
S/G/Y/R/B/O NT_033229AL4454631018486053          
S/G/Y/R/B/O NT_033229AL6274241020112733RH5111310478.66  10567.901 AL627424
S/G/Y/R/B/O NT_033229AL6274241020143443RH2548410478.56    1 AL627424
S/G/Y/R/B/O NT_033229AL6274241020362233RH7493710486.57    1 AL627424
S/G/Y/R/B/O NT_033229AL6274241020668513RH5156610488.57  10577.201 AL627424
S/G/Y/R/B/O NT_033229AL6271441020961863          
S/G/Y/R/B/O NT_033229AC0107891021462153RH5119910487.10104853.0010578.301 AC010789
S/G/Y/R/B/O NT_033229AC0107891022277913RH1804310482.20    1 AC010789, AC016774, U47011
S/G/Y/R/B/O NT_033229AC0107891022385413RH9237510489.58    1 AC010789, AC016774, AF079325
S/G/Y/R/B/O NT_033229AC0107891022417813RH5108510487.10  10575.501 AC010789, AC016774
S/G/Y/R/B/O NT_033229AC0107891022418043RH1026110478.42    1 AC010789, AC016774
S/G/Y/R/B/O NT_033229AC0107891022431883RH6674810488.42    1 AC010789, AC016774
S/G/Y/R/B/O NT_033229AC0107891022544143RH1996  104878.00  1 AC010789, AC016774
S/G/Y/R/B/O NT_033229AC0107891022834543RH9309910482.20    1 AC010789, AC016774
S/G/Y/R/B/O NT_033229AC0107891022860003RH9256310484.14    1 AC010789, AC016774, AY026331
S/G/Y/R/B/O NT_033229AC0107891023029343RH5136810486.55  10578.101 AC010789, AC016774
S/G/Y/R/B/O NT_033229AC0107891023029513RH7811  104878.00  1 AC010789, AC016774
S/G/Y/R/B/O NT_033229AC0107891023030013RH1078210478.66    1 AC010789, AC016774
S/G/Y/R/B/O NT_033229AC0107891023030783RH1718210478.66    1 AC010789, AC016774
S/G/Y/R/B/O NT_033229AL5920691023324823          
S/G/Y/R/B/O NT_033229AL3918271023535563RH5107010484.14104865.0010568.001 AC016774, AL391827
S/G/Y/R/B/O NT_033229AL3918271024186623RH5149810488.00  10578.501 AL391827
S/G/Y/R/B/O NT_033229AL3918271024237963RH4656010482.20    1 AL356597, AL391827


  NT_033229 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033229AL3918271024969153RH4520310482.26    1 AL356597, AL391827
S/G/Y/R/B/O NT_033229AL3918271024970043RH4024410478.66    1 AL356597, AL391827
S/G/Y/R/B/O NT_033229AL5005271025241923RH27014859.41    1 AL356597, AL500527
S/G/Y/R/B/O NT_033229AL5005271025250733RH5120710486.67  10577.201 AL356597, AL500527
S/G/Y/R/B/O NT_033229AL5005271025252143RH3694210487.90    1 AL356597, AL500527
S/G/Y/R/B/O NT_033229AL5005271025252303RH1068510478.66    1 AL356597, AL500527
S/G/Y/R/B/O NT_033229AL5005271026072603RH5155410488.00104771.0010577.201 AL500527
S/G/Y/R/B/O NT_033229AL5005271026072833RH1777210478.66    1 AL500527
S/G/Y/R/B/O NT_033229AL5005271026165973RH4890010482.20    1 AL500527
S/G/Y/R/B/O NT_033229AL5005271026181573RH7554610478.05    1 AL500527
S/G/Y/R/B/O NT_033229AL5005271026196053RH8631  104871.00  1 AL500527
S/G/Y/R/B/O NT_033229AL5005271026197453RH9329110471.99    1 AL500527
S/G/Y/R/B/O NT_033229AL5005271026207853RH5121210477.54  10565.701 AL500527
S/G/Y/R/B/O NT_033229AL5005271026209453RH4451310482.20    1 AL500527
S/G/Y/R/B/O NT_033229AL5005271026209823RH8913  104878.00  1 AL500527
S/G/Y/R/B/O NT_033229AL5005271026209993RH2527310478.05    2 AC098689, AL500527
S/G/Y/R/B/O NT_033229AL1600111026740143          
S/G/Y/R/B/O NT_033229AL3564201027340913AFMA301WF1    10567.901 AL356420
S/G/Y/R/B/O NT_033229AL3564201027470123RH4566310486.99    1 AL356420
S/G/Y/R/B/O NT_033229AL3564201027623703AFM183XB12    10575.501 AL356420
S/G/Y/R/B/O NT_033229AL3564201027653373RH4497710482.26    1 AL356420
S/G/Y/R/B/O NT_033229AL1219281028396733RH8077910486.26    1 AL121928
S/G/Y/R/B/O NT_033229AL1219281028399883RH8070110478.15    1 AL121928
S/G/Y/R/B/O NT_033229AL1219281028400273RH4426210478.66    1 AL121928
S/G/Y/R/B/O NT_033229AL1219281028599563RH2628710486.99    1 AL121928
S/G/Y/R/B/O NT_033229AL1219281028782003RH6992910482.15    1 AL121928
S/G/Y/R/B/O NT_033229AL1219281028802453RH1988  104876.00  1 AL121928
S/G/Y/R/B/O NT_033229AL1219281028805863RH5148910482.26  10570.001 AL121928
S/G/Y/R/B/O NT_033229AL1219281028805873RH5148710482.20104910.0010569.601 AL121928
S/G/Y/R/B/O NT_033229AL1219281028805983RH4739110486.47    1 AL121928
S/G/Y/R/B/O NT_033229AL1219281029072893RH4844210482.26    1 AL121928
S/G/Y/R/B/O NT_033229AL1219281029340273RH5153410482.20  10569.501 AL121928
S/G/Y/R/B/O NT_033229AL1573861029794513          
S/G/Y/R/B/O NT_033229AL3911211030693753RH31152  104899.00  1 AL391121
S/G/Y/R/B/O NT_033229AL3911211030904103RH9391610482.26    1 AL391121
S/G/Y/R/B/O NT_033229AL3911211030904923RH7676810482.20    1 AL391121
S/G/Y/R/B/O NT_033229AL3911211031153633RH9391210478.66    1 AC006106, AL391121
S/G/Y/R/B/O NT_033229AL3911211031310723RH4426810482.20    1 AC006106, AL391121
S/G/Y/R/B/O NT_033229AL3911211031311013RH5110310482.20  10567.901 AC006106, AL391121
S/G/Y/R/B/O NT_033229AL3911211031336483RH4191210482.20    1 AC006106, AL391121
S/G/Y/R/B/O NT_033229AL3911211031339013RH14105  104905.00  1 AC006106, AL391121
S/G/Y/R/B/O NT_033229AL3911211031960893RH10235610478.66    1 AL391121
S/G/Y/R/B/O NT_033229AL3537271032145873          
S/G/Y/R/B/O NT_033229AL3587901032734273RH6483310482.20    2AL356096, AC009144, AL356096, AL358790
S/G/Y/R/B/O NT_033229AL3587901032880313RH1766510478.42    1 AC009144, AL358790, M19489, M63871
S/G/Y/R/B/O NT_033229AL3587901032915993RH8031010481.75    1 AC009144, AL358790, M19489, M63871
S/G/Y/R/B/O NT_033229AL3587901033214733RH5098310482.20  10572.501 AC009144, AL358790
S/G/Y/R/B/O NT_033229AL3587901033216813RH38025  104905.00  1 AC009144, AL358790
S/G/Y/R/B/O NT_033229AL3587901033220273RH9301610486.37    1 AC009144, AL358790
S/G/Y/R/B/O NT_033229AL3587901033589773RH4487710482.20    1 AC009144, AL358790


  NT_033229 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033229AL3587901033590073RH4024210478.66    1 AC009144, AL358790
S/G/Y/R/B/O NT_033229AL3566081033705773RH2868019248.13    4AC083805, AC104082, AL117339, AL136526, AC012264, AC073122, AC083805, AC104082, AL117339, AL136526, AL591107
S/G/Y/R/B/O NT_033229AL3566081033847683RH2601510482.20    1 AC009144, AL356608
S/G/Y/R/B/O NT_033229AL3566081034989033RH5119110486.99  10578.301 AL356608
S/G/Y/R/B/O NT_033229AL1398171035350843RH7775710478.66    1 AL139817
S/G/Y/R/B/O NT_033229AL1398171035421403RH4433710488.42    1 AL139817
S/G/Y/R/B/O NT_033229AL1398171035432653RH5145210482.20  10567.901 AL139817
S/G/Y/R/B/O NT_033229AL1398171035445913RH9246610486.37    1 AL139817
S/G/Y/R/B/O NT_033229AL1398171035455353RH7799210482.20    1 AL139817
S/G/Y/R/B/O NT_033229AL1398171035467433RH8076010478.52    1 AL139817
S/G/Y/R/B/O NT_033229AL1398171035514573RH10352310482.20    1 AL139817
S/G/Y/R/B/O NT_033229 - RH1002010478.66    1AL139339, AL139339
S/G/Y/R/B/O NT_033229 - RH14304  104742.00  1AL627434, AL442068, AL627434
S/G/Y/R/B/O NT_033229 - RH1006010478.66    1AL591408, AL591408
S/G/Y/R/B/O NT_033229 - RH14802  104833.00  3AL133352, AL133352, AL390720
S/G/Y/R/B/O NT_033229 - RH1021810471.38    1AL139819, AC018783, AC026883, AL139819
S/G/Y/R/B/O NT_033229 - RH32101  104790.00  1AL138921, AC018783, AC026883, AL138921
S/G/Y/R/B/O NT_033229 - RH10229310484.14    1AL121929, AC025094, AL121929
S/G/Y/R/B/O NT_033229 - RH10269510482.32    1AL139341, AC012276, AC016744, AL139341
S/G/Y/R/B/O NT_033229 - RH10369710471.73    1AL133352, AL133352, AL390720, AL589862
S/G/Y/R/B/O NT_033229 - RH1506310474.92  10552.000 AL390720, AL589862
S/G/Y/R/B/O NT_033229 - RH1676110480.47    1AL121929, AC025094, AL121929
S/G/Y/R/B/O NT_033229 - D10S198    10555.301AL391684, AL391684
S/G/Y/R/B/O NT_033229 - RH1788410467.43    1AL392107, AL392107, AL442068
S/G/Y/R/B/O NT_033229 - WI-4209    10555.301AL139241, AL139241
S/G/Y/R/B/O NT_033229 - RH2497210467.43    1AL139819, AC026883, AL139819
S/G/Y/R/B/O NT_033229 - RH2539910478.52    0  
S/G/Y/R/B/O NT_033229 - RH2646210467.43    1AL133352, AL133352, AL390720
S/G/Y/R/B/O NT_033229 - RH2656910463.66    1AL133353, AL133353
S/G/Y/R/B/O NT_033229 - RH2669710463.49    1AL133353, AL133353
S/G/Y/R/B/O NT_033229 - RH2701210482.20    1AB020861, AB020861
S/G/Y/R/B/O NT_033229 - RH3676310482.20    1  
S/G/Y/R/B/O NT_033229 - RH4013010480.47    1AL138761, AL138761
S/G/Y/R/B/O NT_033229 - RH4014310465.39    1AL391684, AL391684
S/G/Y/R/B/O NT_033229 - RH4019510461.90    1AL358938, AL358938
S/G/Y/R/B/O NT_033229 - RH4021310480.47    1AL121929, AC025094, AL121929
S/G/Y/R/B/O NT_033229 - RH4022210465.29    1AL133353, AL133353
S/G/Y/R/B/O NT_033229 - RH4022710480.57    1AL162742, AC012276, AC016744, AL162742
S/G/Y/R/B/O NT_033229 - RH4025110478.66    0  
S/G/Y/R/B/O NT_033229 - RH4025910465.39    1AL133353, AL133353
S/G/Y/R/B/O NT_033229 - RH4026310480.47    1  
S/G/Y/R/B/O NT_033229 - RH4236910480.47    1 AC006183
S/G/Y/R/B/O NT_033229 - RH4260710469.37    1AL139819, AC018783, AL139819
S/G/Y/R/B/O NT_033229 - RH4415610467.43    2AC090774, AC018783, AC026883, AC090774, AL356743
S/G/Y/R/B/O NT_033229 - RH4418310472.60    2AC022412, AC026688, AL139819, AC018783, AC022412, AC026688, AC026883, AL139819
S/G/Y/R/B/O NT_033229 - RH4437910467.43    1AL138921, AL138921
S/G/Y/R/B/O NT_033229 - RH4455910466.30    1AC067902, AC114398, AL133353, AC067902, AC114398, AL133353
S/G/Y/R/B/O NT_033229 - RH4472410486.99    0AL356420, AL356420
S/G/Y/R/B/O NT_033229 - RH4495510488.31    0  
S/G/Y/R/B/O NT_033229 - RH4504010462.62    1AL139241, AL139241


  NT_033229 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033229 - RH4542410467.43    1AL139819, AC018783, AC026883, AL139819
S/G/Y/R/B/O NT_033229 - RH4563810482.32    1AL138761, AL138761
S/G/Y/R/B/O NT_033229 - RH4583110467.33    1AL138921, AC018783, AC026883, AL138921
S/G/Y/R/B/O NT_033229 - RH4704010482.26    1AL591408, AL591408
S/G/Y/R/B/O NT_033229 - RH4714910465.49    1AL139243, AF450133, AL139243
S/G/Y/R/B/O NT_033229 - RH4742610467.38    0 AC018783, AC026883
S/G/Y/R/B/O NT_033229 - RH4770110465.39    1AL391684, AL391684
S/G/Y/R/B/O NT_033229 - RH4901410465.39    1AL391684, AL391684
S/G/Y/R/B/O NT_033229 - RH4906010484.04    0  
S/G/Y/R/B/O NT_033229 - RH5098110467.38  10555.300AL133353, AL392107, AL133353, AL392107
S/G/Y/R/B/O NT_033229 - RH5098210482.20  10555.301AL591408, AL591408
S/G/Y/R/B/O NT_033229 - RH5105610469.37104708.0010556.901AL138921, AL138921
S/G/Y/R/B/O NT_033229 - RH5121710467.43104750.0010556.901AL139819, AC018783, AC026883, AL139819
S/G/Y/R/B/O NT_033229 - RH33014  104790.00  1AL133352, AL133352
S/G/Y/R/B/O NT_033229 - RH5128410488.42  10558.401AL121928, AL121928
S/G/Y/R/B/O NT_033229 - RH5130010467.43  10558.401AL139819, AC018783, AC026883, AL139819
S/G/Y/R/B/O NT_033229 - AFM205TG7    10558.401AL138921, AL138921
S/G/Y/R/B/O NT_033229 - RH5130410465.39  10560.301AL391684, AL391684
S/G/Y/R/B/O NT_033229 - RH5132510482.32  10560.501AC068669, AC068669
S/G/Y/R/B/O NT_033229 - RH5132710478.66  10560.501AL139339, AL139339
S/G/Y/R/B/O NT_033229 - RH5148210466.30104729.0010561.301AL133353, AL133353
S/G/Y/R/B/O NT_033229 - RH5148610462.62104755.0010561.401AL139239, AL139239
S/G/Y/R/B/O NT_033229 - RH5153310467.38104840.0010567.901AL138921, AC018783, AC026883, AL138921
S/G/Y/R/B/O NT_033229 - RH37858  104729.00  1AL133353, AL133353
S/G/Y/R/B/O NT_033229 - RH555  104840.00  1AL139819, AC018783, AL139819
S/G/Y/R/B/O NT_033229 - RH5153910467.33  10567.901AL139819, AC018783, AC026883, AL139819
S/G/Y/R/B/O NT_033229 - RH5154610467.33  10568.001AL138921, AL138921
S/G/Y/R/B/O NT_033229 - WI-4865    10568.001AL138761, AL138761
S/G/Y/R/B/O NT_033229 - RH5156510482.32  10568.001AL138761, AL138761
S/G/Y/R/B/O NT_033229 - RH5157210466.30  10572.501AL133353, AL133353
S/G/Y/R/B/O NT_033229 - RH5157510482.32  10578.501AL121929, AC025094, AL121929
S/G/Y/R/B/O NT_033229 - RH5157710465.39  10578.701AL391684, AL391684
S/G/Y/R/B/O NT_033229 - RH6562810466.30    1AL133353, AL133353
S/G/Y/R/B/O NT_033229 - RH6601110488.42    0AL121928, AL121928
S/G/Y/R/B/O NT_033229 - RH6617810488.21    0  
S/G/Y/R/B/O NT_033229 - RH6620710467.38    1AL138921, AC018783, AC026883, AL138921
S/G/Y/R/B/O NT_033229 - RH6627010489.05    0AL591408, AL591408
S/G/Y/R/B/O NT_033229 - RH6664110465.39    1AL139243, AL139243
S/G/Y/R/B/O NT_033229 - RH6697810467.38    1AL138921, AL138921
S/G/Y/R/B/O NT_033229 - RH6877410480.47    1AL121929, AC006183, AC025094, AL121929
S/G/Y/R/B/O NT_033229 - RH6972310471.42    1AL133352, AL133352
S/G/Y/R/B/O NT_033229 - RH7125710480.47    1  
S/G/Y/R/B/O NT_033229 - RH7126810486.47    0  
S/G/Y/R/B/O NT_033229 - RH7127510467.38    1AL441886, AL441886
S/G/Y/R/B/O NT_033229 - RH7565010482.32    1AL133355, AC006109, AL133355
S/G/Y/R/B/O NT_033229 - RH7658710471.99    1AL133352, AL133352, AL390720
S/G/Y/R/B/O NT_033229 - RH7776410482.20    1AL139339, AL139339
S/G/Y/R/B/O NT_033229 - RH7811810489.05    0AL121928, AL121928
S/G/Y/R/B/O NT_033229 - RH7819710465.49    0  
S/G/Y/R/B/O NT_033229 - RH7884710482.20    0  


  NT_033229 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033229 - RH9128910482.32    1AL139341, AC012276, AC016744, AL139341
S/G/Y/R/B/O NT_033229 - RH7962610466.51    1AL133353, AL133353
S/G/Y/R/B/O NT_033229 - RH8034110465.39    0AL139243, AF450133, AL139243
S/G/Y/R/B/O NT_033229 - RH9143710466.30    0  
S/G/Y/R/B/O NT_033229 - RH9209810465.39    1AL139243, AL139243
S/G/Y/R/B/O NT_033229 - RH9237810478.66    1AL139339, AL139339
S/G/Y/R/B/O NT_033229 - RH9278110482.32    1AL121929, AC025094, AL121929
S/G/Y/R/B/O NT_033229 - RH9306310482.32    1AL121929, AC025094, AL121929
S/G/Y/R/B/O NT_033229 - RH9355810478.66    0  
S/G/Y/R/B/O NT_033229 - RH9381310467.98    1AL392107, AL392107, AL442068
S/G/Y/R/B/O NT_033229 - RH9389610478.66    1AL139339, AL139339