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  Chromosome 10 - RH Maps - Single Contig
 

Chromosome 10 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_033896
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033896AC094097373313931          
S/G/Y/R/B/O NT_033896AL591850373354303          
S/G/Y/R/B/O NT_033896AL365203374054593RH9835410195.25    1AC094097, AC094097, AL365203, AL590967
S/G/Y/R/B/O NT_033896AL365203374192213RH8107  101976.00  1AC094097, AC094097, AL365203, AL590967
S/G/Y/R/B/O NT_033896AL365203374255023RH4019210195.03    1AC094097, AC094097, AL365203, AL590967
S/G/Y/R/B/O NT_033896AL133333375998673RH4781810194.71    1 AC041017, AL133333, AL591369
S/G/Y/R/B/O NT_033896AL121748376955863RH1701610196.22    1 AL121748, AL591369
S/G/Y/R/B/O NT_033896AL121748377110963RH6574710194.71    1 AL121748, AL591369
S/G/Y/R/B/O NT_033896AL121748377539153RH4650110194.71    1 AL121748
S/G/Y/R/B/O NT_033896AL121748377782513RH4561210183.94    1 AL121748
S/G/Y/R/B/O NT_033896AL353600377837073          
S/G/Y/R/B/O NT_033896AL392109379062473          
S/G/Y/R/B/O NT_033896AL392188379126961          
S/G/Y/R/B/O NT_033896AC084133379923711RH417901111.25    1 AC084133
S/G/Y/R/B/O NT_033896AC084133380000931RH51878116.38  1121.001 AC084133
S/G/Y/R/B/O NT_033896AL356243380280073          
S/G/Y/R/B/O NT_033896AC018980380793623RH9243210197.40    1AL392188, AC018980, AC020644, AL392188
S/G/Y/R/B/O NT_033896AL450313382277143          
S/G/Y/R/B/O NT_033896AL353643382696913          
S/G/Y/R/B/O NT_033896AL117338385650373WI-640    10231.901 AC040971
S/G/Y/R/B/O NT_033896AL160409386521293RH4844710183.63    1 AC025823, AL160409, AL591464, U82210
S/G/Y/R/B/O NT_033896AL390766387285633RH2665310196.86    1 AC011644, AC013705, AL390766
S/G/Y/R/B/O NT_033896AL390766387953033RH9287410196.43    1 AC011644, AC013705, AL356462, AL390766
S/G/Y/R/B/O NT_033896AL392123388617763          
S/G/Y/R/B/O NT_033896AL360233389641333          
S/G/Y/R/B/O NT_033896AL138768390912863RH5134710196.97  10235.901 AC012241, AL138768, AL391067, AL392171
S/G/Y/R/B/O NT_033896AL138768391654653RH4594710196.75    1 AL138768, AL391067, AL392171
S/G/Y/R/B/O NT_033896AL138768391730563RH4652610195.25    1 AL138768, AL391067, AL392171
S/G/Y/R/B/O NT_033896AL590039392463543          
S/G/Y/R/B/O NT_033896AL603963393221863          
S/G/Y/R/B/O NT_033896AL450337393374433          
S/G/Y/R/B/O NT_033896AL392046395510413RH5102510196.86  10241.301 AL392046, AL591026
S/G/Y/R/B/O NT_033896AL157783397219693RH4021010199.20    1 AC022159, AL157783, AL591118
S/G/Y/R/B/O NT_033896AL117336397543643RH4693110195.78    1 AC022159, AL117336
S/G/Y/R/B/O NT_033896AL117336397547013RH2582710195.25    1 AC022159, AL117336
S/G/Y/R/B/O NT_033896AL117336397551303RH7919810200.80    1 AC022159, AL117336
S/G/Y/R/B/O NT_033896AL117336398116313CHLC.GGAA22G11    10245.601 AC022159, AL117336
S/G/Y/R/B/O NT_033896AL603824399624433RH7644710195.19    1 AL591029, AL603824
S/G/Y/R/B/O NT_033896AL603824399949233RH10430210201.62    1 AC008244, AL591029, AL603824
S/G/Y/R/B/O NT_033896AL603824400151363RH5157810201.09  10247.501 AC008244, AL591029, AL603824
S/G/Y/R/B/O NT_033896AL592445400279053          
S/G/Y/R/B/O NT_033896AL121749400859393RH4015510204.35    1 AC008244, AL121749, AL591182
S/G/Y/R/B/O NT_033896AL121749400859483RH6776110204.45    1 AC008244, AL121749, AL591182
S/G/Y/R/B/O NT_033896AL121749400970483RH7037210204.35    1 AC008244, AL121749, AL591182
S/G/Y/R/B/O NT_033896AL121749401119473RH4441010204.35    1 AC008244, AL121749, AL591182
S/G/Y/R/B/O NT_033896AL121749401123983RH5094210201.41  10251.101 AC008244, AL121749, AL591182
S/G/Y/R/B/O NT_033896AL121749401124473RH5131810207.38  10254.201 AC008244, AL121749, AL591182
S/G/Y/R/B/O NT_033896AL121749401134553RH5105810199.63101871.0010251.101 AC008244, AL121749, AL591182
S/G/Y/R/B/O NT_033896AL121749401134743RH4724710204.35    1 AC008244, AL121749, AL591182
S/G/Y/R/B/O NT_033896AL121749401135203RH1718110204.45    1 AC008244, AL121749, AL591182


  NT_033896 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033896AL121749401139533RH7888  101868.00  1 AC008244, AL121749, AL591182
S/G/Y/R/B/O NT_033896AL121749401140853RH1720510204.45    1 AC008244, AL121749, AL591182
S/G/Y/R/B/O NT_033896AL121749401432453RH4262810204.55101858.00  1 AL591182
S/G/Y/R/B/O NT_033896AL121749401782683RH6855310207.00    1 AL121749, AL591182
S/G/Y/R/B/O NT_033896AL121749401807833RH4514310196.54    1 AL121749
S/G/Y/R/B/O NT_033896AL358173402183253          
S/G/Y/R/B/O NT_033896AL356093402203193          
S/G/Y/R/B/O NT_033896AL157892404188563          
S/G/Y/R/B/O NT_033896AL365500404421983          
S/G/Y/R/B/O NT_033896AL355300405937533          
S/G/Y/R/B/O NT_033896AC018684407332093          
S/G/Y/R/B/O NT_033896AL390859408590163          
S/G/Y/R/B/O NT_033896AL590730409745423          
S/G/Y/R/B/O NT_033896AL354660411588433          
S/G/Y/R/B/O NT_033896AL355517412955912RH283710213.65  10257.001 AC025869, AL355517, AL441903
S/G/Y/R/B/O NT_033896AL355517412955912RH30955  101822.00  1 AC025869, AL355517, AL441903
S/G/Y/R/B/O NT_033896AL390061413577563          
S/G/Y/R/B/O NT_033896AL591105415319023          
S/G/Y/R/B/O NT_033896AC067744415412673          
S/G/Y/R/B/O NT_033896AL357148416963222          
S/G/Y/R/B/O NT_033896AL157387417594363          
S/G/Y/R/B/O NT_033896AL391686419448253WI-3561    10262.201 AL391686, AL591121
S/G/Y/R/B/O NT_033896AL133350419671043          
S/G/Y/R/B/O NT_033896AL121927420568373          
S/G/Y/R/B/O NT_033896AL132657421760583          
S/G/Y/R/B/O NT_033896AL135791423714573WI-11092    10272.501 AF205588, AL135791, AL390779
S/G/Y/R/B/O NT_033896AL135791423752413RH6923110223.62    1 AF205588, AL135791
S/G/Y/R/B/O NT_033896AL132659424035763          
S/G/Y/R/B/O NT_033896AL117337424322093RH5108210225.29101839.0010272.401 AF205588, AL117337, AL390779
S/G/Y/R/B/O NT_033896AL117337424981263RH4579610226.77    1 AF205588, AL390779, AL591000
S/G/Y/R/B/O NT_033896AL161931425989853RH1883  101837.00  1 AF205588, AL161931, AL591000, AL591107
S/G/Y/R/B/O NT_033896AL161931426003833RH4606710257.51    2AL022345, AF205588, AL022345, AL023808, AL161931, AL354975, AL391479, AL590986
S/G/Y/R/B/O NT_033896AL117339426612623RH9002  101838.00  1 AF205588, AL591107
S/G/Y/R/B/O NT_033896AL117339426629953RH7776510223.62    2AL022345, AF205588, AL022345, AL023808, AL117339, AL391479, AL591107
S/G/Y/R/B/O NT_033896AL117339426633593RH5142110225.42  10271.401 AF205588, AL117339, AL591107
S/G/Y/R/B/O NT_033896AL117339426637913RH9292810227.69    2 AF205588, AL117339, AL354975, AL591107
S/G/Y/R/B/O NT_033896AL117339426666763RH5151110227.11  10276.401 AL117339, AL591107
S/G/Y/R/B/O NT_033896AL117339426667123RH1088810226.98    1 AC024147, AL117339, AL591107
S/G/Y/R/B/O NT_033896AL117339426900033RH10445810226.77    1 AL117339, AL591107
S/G/Y/R/B/O NT_033896AL132658428216283          
S/G/Y/R/B/O NT_033896AL133217428416183          
S/G/Y/R/B/O NT_033896AL133216429055993          
S/G/Y/R/B/O NT_033896AL391494430724331          
S/G/Y/R/B/O NT_033896 - RH4021210194.93    1AL160291, AL162272, AL160291, AL162272
S/G/Y/R/B/O NT_033896 - CHLC.GATA70H02    10238.500  
S/G/Y/R/B/O NT_033896 - RH4879810196.54    0AL117336, AL117336, AL591029
S/G/Y/R/B/O NT_033896 - RH6621910225.87    0 AF205588, AL591000
S/G/Y/R/B/O NT_033896 - RH7003410195.03    0  
S/G/Y/R/B/O NT_033896 - RH7116310196.22    0  
S/G/Y/R/B/O NT_033896 - RH7862410196.00    0