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  Chromosome 10 - RH Maps - Single Contig
 

Chromosome 10 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_008646
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008646AC012044487685091          
S/G/Y/R/B/O NT_008646AL512595488347243RH10260010280.41    1 AL512595
S/G/Y/R/B/O NT_008646AL445201488712453RH2703810275.85    1 AL445201
S/G/Y/R/B/O NT_008646AL445201489429313RH9383910277.93    1AC021320, AC021320, AL445201
S/G/Y/R/B/O NT_008646AL645998490215823          
S/G/Y/R/B/O NT_008646AC021320490320231          
S/G/Y/R/B/O NT_008646AL391137491325921WI-15534    10358.105AC022400, AC037447, AL450334, AL591684, AL603966, AC022400, AC037447, AL391137, AL450334, AL591684, AL603966
S/G/Y/R/B/O NT_008646AL391137491927301RH14031  102264.00  3AL591684, AL603965, AL391137, AL591684, AL603965
S/G/Y/R/B/O NT_008646AL390716492130033RH4452810280.18    1 AL390716
S/G/Y/R/B/O NT_008646AC021411492843501          
S/G/Y/R/B/O NT_008646AL589822492940802          
S/G/Y/R/B/O NT_008646AL450342493947173RH4031210273.55    1AL589822, AL450342, AL589822, D28485
S/G/Y/R/B/O NT_008646AL450342494076303RH5101010277.03    1AL589822, AL450342, AL589822
S/G/Y/R/B/O NT_008646AL450342494076303SGC35292    10318.001AL589822, AL450342, AL589822
S/G/Y/R/B/O NT_008646AL450342494315353RH4412610274.87    1AL589822, AL450342, AL589822
S/G/Y/R/B/O NT_008646AL450342494344603RH5116610278.83    1AL589822, AL450342, AL589822
S/G/Y/R/B/O NT_008646AL450342494344603WI-19959    10317.901AL589822, AL450342, AL589822
S/G/Y/R/B/O NT_008646AL450342494351903RH1079010281.40    1AL589822, AL450342, AL589822
S/G/Y/R/B/O NT_008646AL450342494373493RH4412710277.15    1AL589822, AL450342, AL589822
S/G/Y/R/B/O NT_008646AL442003495791983RH38653  102373.00  1AC012044, AC012044, AL442003, AL672187
S/G/Y/R/B/O NT_008646AL442003496900913RH5149210281.52  10359.101AC021320, AC018510, AC021320, AL442003
S/G/Y/R/B/O NT_008646AL450382497377153RH5094810282.24  10350.701 AC055726, AL450382
S/G/Y/R/B/O NT_008646AL450382497377263WI-16150    10358.001 AC055726, AL450382
S/G/Y/R/B/O NT_008646AL450382497379773RH5147910282.24  10358.101AC012044, AC012044, AC018510, AC055726, AL450382, AL672187
S/G/Y/R/B/O NT_008646AL450382498264713RH1108  102376.00  1 AC012131, AC055726, AL450382, AL583858
S/G/Y/R/B/O NT_008646AL450382498441533WI-4701    10390.901 AC012131, AC055726, AL450382, AL583858
S/G/Y/R/B/O NT_008646AL450382498704223RH4013410303.48    1 AC012131, AL450382, AL583858
S/G/Y/R/B/O NT_008646AL450382498707553RH1805210311.73    1 AC012131, AL450382, AL583858
S/G/Y/R/B/O NT_008646AC069547499105543RH2640010320.92    1 AC012131, AC069547, AL583858
S/G/Y/R/B/O NT_008646AC069547499118343RH8090010293.66    1 AC012131, AC069547, AL583858
S/G/Y/R/B/O NT_008646AC069547499119873RH9924010310.82    1 AC012131, AC069547, AL583858
S/G/Y/R/B/O NT_008646AC069547499822563RH5126110316.36  10388.101 AC012131, AC069547, AL583858
S/G/Y/R/B/O NT_008646AC069547499873913D10S196    10385.601 AC069547
S/G/Y/R/B/O NT_008646AC069547499979003RH7502610294.57    1 AC069547
S/G/Y/R/B/O NT_008646AC069547500129693RH5101310320.37  10389.301 AC069547
S/G/Y/R/B/O NT_008646AC069547500543483D10S538    10389.601AL117341, AC069547, AL117341
S/G/Y/R/B/O NT_008646AC069547500543483RH30785  102369.00  1AL117341, AC069547, AL117341
S/G/Y/R/B/O NT_008646AL117341501362633RH14256  102346.00  1 AL117341
S/G/Y/R/B/O NT_008646AL117341501364503WI-3208    10393.301 AL117341
S/G/Y/R/B/O NT_008646AL117341501697643RH4568410311.22    1 AL117341
S/G/Y/R/B/O NT_008646AL117341501805413RH8054610295.92    1 AL117341
S/G/Y/R/B/O NT_008646AL117341501924133RH282810307.46  10382.801 AL117341
S/G/Y/R/B/O NT_008646AL117341501924133RH225  102394.00  1 AL117341
S/G/Y/R/B/O NT_008646AL596137501974013          
S/G/Y/R/B/O NT_008646AL589794503314172RH7842  54558.00  3AC008494, AC094095, AL512662, AC008494, AC008585, AC016663, AC094095, AL512662, AL513306, AL589794
S/G/Y/R/B/O NT_008646AL589794504043302RH4692810319.49    1AL512366, AL512366, AL513306, AL589794
S/G/Y/R/B/O NT_008646AL589794504050192RH10353910319.49    1 AL513306
S/G/Y/R/B/O NT_008646AL589794504115632RH7013510303.48    1AL512366, AL512366, AL513306, AL589794
S/G/Y/R/B/O NT_008646AL589794504116552RH1725110305.64    1AL512366, AL512366, AL513306, AL589794
S/G/Y/R/B/O NT_008646AL512366504238173WI-5856    10393.301 AL512366, AL513306


  NT_008646 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008646AC044786505577233          
S/G/Y/R/B/O NT_008646AL450388506485513RH9360110275.10    1AC021411, AC021411, AL450388
S/G/Y/R/B/O NT_008646AL603965507545683RH629489305.70  9394.803AC015671, AC015671
S/G/Y/R/B/O NT_008646AL603965508201413RH14031  102264.00  3AL391137, AL591684, AL391137, AL591684, AL603965
S/G/Y/R/B/O NT_008646 - RH2540110281.21    4AC022400, AC037447, AL512662, AL603966, AL603982, AL645813, AC022400, AC037447, AL023808, AL360082, AL512662, AL591132, AL591181, AL603966, AL603982, AL645813
S/G/Y/R/B/O NT_008646 - RH6897510282.12    1AC010865, AC010865