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  Chromosome 10 - RH Maps - Single Contig
 

Chromosome 10 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_017696
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_017696AL603966509495633WI-15534    10358.105AC022400, AC037447, AL391137, AL450334, AL591684, AC022400, AC037447, AL391137, AL450334, AL591684, AL603966
S/G/Y/R/B/O NT_017696AL603966509728133RH2540110281.21    4AC022400, AC037447, AL512662, AL603982, AL645813, AC022400, AC037447, AL023808, AL360082, AL512662, AL591132, AL591181, AL603966, AL603982, AL645813
S/G/Y/R/B/O NT_017696AL603966509865423WI-3914    10365.101AL672108, AL603966, AL672108
S/G/Y/R/B/O NT_017696AC013284510696953WI-15516    10368.902AL450334, AC010812, AC013284, AC026739, AL450334
S/G/Y/R/B/O NT_017696AC013284510960533WI-5526    10372.901 AC010812, AC013284, AC026739
S/G/Y/R/B/O NT_017696AC074325512418793RH5103210293.18  10374.901 AC068063, AC074325
S/G/Y/R/B/O NT_017696AC074325512676213RH10426810295.01    1AC016397, AC016397, AC074325
S/G/Y/R/B/O NT_017696AC074325512925783RH5146310295.44102267.0010376.401AC016397, AC016397, AC068063, AC074325
S/G/Y/R/B/O NT_017696AC074325512953583RH5101810294.93  10376.601AC016397, AC016397, AC068063, AC074325
S/G/Y/R/B/O NT_017696AC074325512953583RH37753  102262.00  1AC016397, AC016397, AC068063, AC074325
S/G/Y/R/B/O NT_017696AC074325512954163RH7997  102267.00  1AC016397, AC016397, AC068063, AC074325
S/G/Y/R/B/O NT_017696AC016397513478223RH4018710293.10    1 AC010755, AC016397
S/G/Y/R/B/O NT_017696AC016397513483643RH6961610298.82    1 AC010755
S/G/Y/R/B/O NT_017696AC016397513486203RH4028310299.56    1 AC010755, AC016397
S/G/Y/R/B/O NT_017696AC016397513490093RH5115510294.45  10376.501 AC010755, AC016397
S/G/Y/R/B/O NT_017696AC016397513491073RH2567110296.04    1 AC010755
S/G/Y/R/B/O NT_017696AC016397513520793RH5095110294.93  10376.601 AC016397
S/G/Y/R/B/O NT_017696AC016399514860203RH5120810296.16  10376.501AC016823, AC010755, AC016823
S/G/Y/R/B/O NT_017696AC068898515636161          
S/G/Y/R/B/O NT_017696AC022533517430901          
S/G/Y/R/B/O NT_017696AC035139517920971RH4261510294.81102282.00  1AC022533, AC022533
S/G/Y/R/B/O NT_017696AC035139518089181WI-10599    10376.601AC022533, AC022533, AC035139
S/G/Y/R/B/O NT_017696AC060234519733591SGC35721    10378.301AC084727, AC060234, AC084727
S/G/Y/R/B/O NT_017696AC060234519733591RH8031  102225.00  1AC084727, AC060234, AC084727
S/G/Y/R/B/O NT_017696AC060234519774021RH4826410296.48    1AC037457, AC084727, AC037457, AC060234, AC084727
S/G/Y/R/B/O NT_017696AC084727521023701RH9225710293.05    1 AC084727
S/G/Y/R/B/O NT_017696AC084727521139451WI-5446    10374.901 AC084727
S/G/Y/R/B/O NT_017696AC084727521140331RH7576810297.58    1 AC084727
S/G/Y/R/B/O NT_017696AL441885521293813          
S/G/Y/R/B/O NT_017696AC027674522557913RH4196410293.05    1 AC027674
S/G/Y/R/B/O NT_017696AC027674523092043WI-9753    10376.601 AC027674
S/G/Y/R/B/O NT_017696AL138760524154443RH10426110292.62    1 AL138760
S/G/Y/R/B/O NT_017696AL138760524180103RH4018210296.71    1 AL138760
S/G/Y/R/B/O NT_017696AL138760524308183RH6666210297.06    1 AL138760
S/G/Y/R/B/O NT_017696AL138760524612563RH38148  102296.00  1 AL138760
S/G/Y/R/B/O NT_017696AL138760524744213RH4480810298.27    1 AL138760
S/G/Y/R/B/O NT_017696AL138760524782483RH9830810296.71    1 AL138760
S/G/Y/R/B/O NT_017696AC073366526089863WI-5311    10380.801AC069546, AC069546, AC073366
S/G/Y/R/B/O NT_017696AC069546526939401RH7645510316.98    1AC012683, AC012683, AC069546
S/G/Y/R/B/O NT_017696AC069546526940181RH4453610293.66    1AC012683, AC012683, AC069546
S/G/Y/R/B/O NT_017696AC012683527011161          
S/G/Y/R/B/O NT_017696AC037457527781851RH6999710297.61    1AC012683, AC069546, AC012683, AC037457, AC069546
S/G/Y/R/B/O NT_017696 - RH1725110305.64    1AL512366, AL589794, AL512366, AL513306, AL589794
S/G/Y/R/B/O NT_017696 - RH37961  102289.00  1AL157893, AL645992, AL157893, AL645536, AL645992
S/G/Y/R/B/O NT_017696 - SGC31490    10368.901AC021038, AC021038, J05253
S/G/Y/R/B/O NT_017696 - RH1805210311.73    1AL450382, AC012131, AL450382, AL583858
S/G/Y/R/B/O NT_017696 - RH282810307.46    1AL117341, AL117341
S/G/Y/R/B/O NT_017696 - RH4013410303.48    1AL450382, AC012131, AL450382, AL583858
S/G/Y/R/B/O NT_017696 - RH4013910295.80    0  
S/G/Y/R/B/O NT_017696 - RH4406610295.92    1AC021038, AC021038, J05253


  NT_017696 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_017696 - RH4568410311.22    1AL117341, AL117341
S/G/Y/R/B/O NT_017696 - RH7013510303.48    1AL512366, AL589794, AL512366, AL513306, AL589794
S/G/Y/R/B/O NT_017696 - RH7853010294.69    0  
S/G/Y/R/B/O NT_017696 - RH9924010310.82    1AC069547, AC012131, AC069547, AL583858