Home    Genome Browser    BLAT Search    Help
  Chromosome 10 - RH Maps - Single Contig
 

Chromosome 10 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_008818
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008818AC0677461182024911RH9910210370.67    2AC067749, AC067746, AC067749, AC067966
S/G/Y/R/B/O NT_008818AL6070441182070842          
S/G/Y/R/B/O NT_008818AL5899491184115122          
S/G/Y/R/B/O NT_008818AC0125781184836241          
S/G/Y/R/B/O NT_008818AL3902031186977982RH10287910557.80    1 AL390203
S/G/Y/R/B/O NT_008818AL6070761187858413          
S/G/Y/R/B/O NT_008818AC0116361188451851          
S/G/Y/R/B/O NT_008818AC0351381188956941RH31163  106598.00  1 AC035138
S/G/Y/R/B/O NT_008818AL3590941189525303RH4899410552.59106360.00  1 AL359094
S/G/Y/R/B/O NT_008818AL3590941189734143RH10417410552.76    1 AL359094
S/G/Y/R/B/O NT_008818AL3909201190990193RH5148510552.80  10659.701 AL355295, AL390920
S/G/Y/R/B/O NT_008818AL5903721192385193          
S/G/Y/R/B/O NT_008818AL1577111193044883RH6601210554.69    1  
S/G/Y/R/B/O NT_008818AL1577111193653623RH74581  106430.00  1 AL157711
S/G/Y/R/B/O NT_008818AL1577111193654093RH4413310554.69    1 AL157711
S/G/Y/R/B/O NT_008818AL1577111193661383RH5138010554.18  10661.701 AL157711
S/G/Y/R/B/O NT_008818AL3553161194122033RH5147510556.09  10673.301 AL355316
S/G/Y/R/B/O NT_008818AL3553161194882093RH4952910556.09106405.00  1 AL355316
S/G/Y/R/B/O NT_008818AL3910051195961383WI-4342    10669.501 AL391005
S/G/Y/R/B/O NT_008818AL1573931197007813RH9303610556.19    1AL391005, AL157393, AL391005
S/G/Y/R/B/O NT_008818AL1573931197017883RH4903610556.09106422.00  1 AL157393
S/G/Y/R/B/O NT_008818AL1581661198380533RH10208310556.09    1 AL158166
S/G/Y/R/B/O NT_008818AL1581661199363883WI-3219    10662.301 AL158166
S/G/Y/R/B/O NT_008818AL3902361200435743RH4454610556.09    1 AL390236
S/G/Y/R/B/O NT_008818AL3902361200437243RH1050910556.09    1 AL390236
S/G/Y/R/B/O NT_008818AL3902361200442013RH2714710556.09    1 AL390236
S/G/Y/R/B/O NT_008818AL3902361200454923RH5100910556.09  10662.401 AL390236
S/G/Y/R/B/O NT_008818AL3902361200552423RH5138910556.19106437.0010671.501 AL390236
S/G/Y/R/B/O NT_008818AL3902361200552423RH6972110556.19    1 AL390236
S/G/Y/R/B/O NT_008818AL3902361200565743RH4027010556.19    1 AL390236, X74107
S/G/Y/R/B/O NT_008818AL3902361200578153RH4414710556.09    1 AL390236
S/G/Y/R/B/O NT_008818AL3902361200650573RH42840  106437.00  1 AL390236, X74107
S/G/Y/R/B/O NT_008818AL3555291201677413RH4269210556.19106437.00  1 AL161649, AL355529
S/G/Y/R/B/O NT_008818AL3907631202047073          
S/G/Y/R/B/O NT_008818AL3580921203647513          
S/G/Y/R/B/O NT_008818AL1601741204665673          
S/G/Y/R/B/O NT_008818AL1578971205951413          
S/G/Y/R/B/O NT_008818AL1388971207664513          
S/G/Y/R/B/O NT_008818AL3555371209186883RH10436510557.80    1 AC019000, AL355537
S/G/Y/R/B/O NT_008818AL3555371209379033WI-4197    10665.301 AC019000, AL355537
S/G/Y/R/B/O NT_008818AL3537221210128583          
S/G/Y/R/B/O NT_008818AL1398201210472813          
S/G/Y/R/B/O NT_008818AL3918691211418283RH6555310557.80    1 AC019001, AL391869
S/G/Y/R/B/O NT_008818AL3918691212401593RH10437410559.71    1 AC007898, AL391869
S/G/Y/R/B/O NT_008818AL6456421212675023          
S/G/Y/R/B/O NT_008818AL3595081213218993          
S/G/Y/R/B/O NT_008818AL3555311214500003RH7017910557.00    2AC067839, AC022688, AC067839, AL355531
S/G/Y/R/B/O NT_008818AL3537251215920853          
S/G/Y/R/B/O NT_008818AL1578321216516093          
S/G/Y/R/B/O NT_008818AL3549501217951633RH5100210557.00  10668.801 AL354950


  NT_008818 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008818AL3549501217961123RH4443510557.00    1 AL354950
S/G/Y/R/B/O NT_008818AL3549501217963383RH7072110557.00    1  
S/G/Y/R/B/O NT_008818AL3549501218924153RH4760810557.00    1 AL354950
S/G/Y/R/B/O NT_008818AL1394081219438243          
S/G/Y/R/B/O NT_008818AL1391231220237983RH7553710557.80    1 AL139123
S/G/Y/R/B/O NT_008818AL1391231221424683RH5117510557.00  10672.101 AL139123
S/G/Y/R/B/O NT_008818AL1391231221441073RH4017510557.00    1 AL139123
S/G/Y/R/B/O NT_008818AL1391231221682493RH9261110557.00    1 AL139123
S/G/Y/R/B/O NT_008818AL1616481222195623WI-3778    10668.701 AL161648
S/G/Y/R/B/O NT_008818AL1577121222420393          
S/G/Y/R/B/O NT_008818AL3555001223780923D10S1201    10670.301AC023387, AL157712, AC011965, AC023387, AL157712, AL355500
S/G/Y/R/B/O NT_008818AL3555001224011073RH6676610557.00    1AC023387, AL157712, AC011965, AC023387, AL157712, AL355500
S/G/Y/R/B/O NT_008818AL3555001224756123RH9278510557.80    1 AL355500
S/G/Y/R/B/O NT_008818AC0168161224838453          
S/G/Y/R/B/O NT_008818AC0276691225678263          
S/G/Y/R/B/O NT_008818AC0233871227504851