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  Chromosome 10 - RH Maps - Single Contig
 

Chromosome 10 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_033892
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033892AL158209216570763          
S/G/Y/R/B/O NT_033892AL358780218756451RH5152110133.63101126.0010137.001 AL358780
S/G/Y/R/B/O NT_033892AL358780218757551RH4733610133.91    1 AL358780
S/G/Y/R/B/O NT_033892AL161799218775803RH4565210134.30    1AL358780, AL161799, AL358780
S/G/Y/R/B/O NT_033892AL161799219376943RH1518810133.19    1 AL161799
S/G/Y/R/B/O NT_033892AL161799219376943D10S211    10135.401 AL161799
S/G/Y/R/B/O NT_033892AL161799219946313RH5142710134.97  10138.301 AL161799
S/G/Y/R/B/O NT_033892AL161799220156653RH4880010134.02    1AL357372, AL161799, AL357372
S/G/Y/R/B/O NT_033892AL357372220338893RH38175  101131.00  1 AL357372, AL592440
S/G/Y/R/B/O NT_033892AL357372220339793RH9123910133.91    1 AL357372, AL592440
S/G/Y/R/B/O NT_033892AL357372220455383RH5130510134.52101100.0010140.201 AL357372, AL592440
S/G/Y/R/B/O NT_033892AL357372220455503RH4460110134.08    1 AL357372, AL592440
S/G/Y/R/B/O NT_033892AL359697220607713RH8094  101126.00  1 AL359697, AL592440
S/G/Y/R/B/O NT_033892AL359697220610313RH4029110134.30    1 AL359697, AL592440
S/G/Y/R/B/O NT_033892AL359697220619053RH10241410134.30    1 AL359697, AL592440
S/G/Y/R/B/O NT_033892AL359697220754373RH5115910133.19  10141.601 AL359697, AL592440
S/G/Y/R/B/O NT_033892AL359697220824193RH5110010133.91  10140.101 AL359697, AL592440
S/G/Y/R/B/O NT_033892AL359697220824193RH1749810134.30    1 AL359697, AL592440
S/G/Y/R/B/O NT_033892AL359697221363123RH8109510133.91    1 AC044809, AL359697, AL592440
S/G/Y/R/B/O NT_033892AL359697222004333RH5106210133.80  10138.501 AC044809, AL359697, AL592440
S/G/Y/R/B/O NT_033892AL445431222835563RH5157310136.18  10140.001 AC044809, AL445431
S/G/Y/R/B/O NT_033892AL445431222835963RH4468910134.02    1 AC044809, AL445431
S/G/Y/R/B/O NT_033892AL596115223639933          
S/G/Y/R/B/O NT_033892AL157831223912503          
S/G/Y/R/B/O NT_033892AL158211225726361RH37794  101012.00  1 AL158211
S/G/Y/R/B/O NT_033892AL158211225757761RH10383710134.52    1 AL158211
S/G/Y/R/B/O NT_033892AL158211226360241RH4434510134.52    1 AL158211
S/G/Y/R/B/O NT_033892AL158211226366671RH5152510134.52  10140.101 AL158211, AL360216
S/G/Y/R/B/O NT_033892AL158211226387781RH5114910134.52  10140.101 AL158211
S/G/Y/R/B/O NT_033892AL158211226388761RH6494610134.13    1 AL158211
S/G/Y/R/B/O NT_033892AL158211226483171RH5106810134.13  10138.501 AL158211, AL360216
S/G/Y/R/B/O NT_033892AL158211226484481RH8640  101140.00  1 AL158211, AL360216
S/G/Y/R/B/O NT_033892AL158211226917421WI-4906    10140.101 AL158211, AL360216
S/G/Y/R/B/O NT_033892AL513128227361053RH14807  10967.00  1 AL360216, AL513128
S/G/Y/R/B/O NT_033892AL513128227543363RH5147010134.0810998.0010143.101 AL360216, AL513128
S/G/Y/R/B/O NT_033892AL513128227543463RH2611710134.30    1 AL360216, AL513128
S/G/Y/R/B/O NT_033892AL513128227917063RH10255010133.58    1 AL360216, AL513128
S/G/Y/R/B/O NT_033892AL513128228541193RH7859010134.35    1 AL513128
S/G/Y/R/B/O NT_033892AL513128228552413RH4441910133.58    1 AL513128
S/G/Y/R/B/O NT_033892AL513128228553113RH32962  101154.00  1 AL513128
S/G/Y/R/B/O NT_033892AL513128228553203RH2603710133.58    1 AL513128
S/G/Y/R/B/O NT_033892AL513128228558003RH7992  10991.00  1 AL513128
S/G/Y/R/B/O NT_033892AL513128228559103RH5092610135.63  10146.001 AL513128
S/G/Y/R/B/O NT_033892AL513128228559133RH7057010133.80    1 AL513128
S/G/Y/R/B/O NT_033892AL513128228689503RH4016310134.30    1 AL513128
S/G/Y/R/B/O NT_033892AL157707228846803          
S/G/Y/R/B/O NT_033892AL390318229659923RH4268510134.75101174.00  1 AC010161, AL390318
S/G/Y/R/B/O NT_033892AL390318229905453RH30849  101170.00  1 AC010161, AL390318
S/G/Y/R/B/O NT_033892AL359375230950703          
S/G/Y/R/B/O NT_033892AC079269232199163          


  NT_033892 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033892AL139815233513133RH10383010135.41    1 AC022247, AL139815, AL365507
S/G/Y/R/B/O NT_033892AL139281234240632RH31131  101181.00  1 AL139281, AL365507
S/G/Y/R/B/O NT_033892AL139281234350932RH2829610137.16    1 AL139281, AL365507
S/G/Y/R/B/O NT_033892AL139281234397572RH4475910136.29    1 AL139281, AL365507
S/G/Y/R/B/O NT_033892AL139281234406702RH4022510136.29    1 AL139281, AL365507
S/G/Y/R/B/O NT_033892AL139281234458852RH33641  101178.00  1 AL139281
S/G/Y/R/B/O NT_033892AL592296236241032RH9849710134.80    1 AL592296
S/G/Y/R/B/O NT_033892AL606469236334682          
S/G/Y/R/B/O NT_033892AL512603237607641RH9436410137.38    1AL606469, AL512603, AL606469
S/G/Y/R/B/O NT_033892AL512603238590271WI-4724    10151.701 AL356418, AL512603
S/G/Y/R/B/O NT_033892AL353650239326343          
S/G/Y/R/B/O NT_033892AL355977240530601WI-11237    10154.701 AL355977
S/G/Y/R/B/O NT_033892AL391499241886793          
S/G/Y/R/B/O NT_033892AL356477243314293          
S/G/Y/R/B/O NT_033892AL157781243584503          
S/G/Y/R/B/O NT_033892AC063961245126163RH549  101233.00  1 AC063961
S/G/Y/R/B/O NT_033892AL356113246353933RH5146110140.80  10154.401 AC002559, AL356113
S/G/Y/R/B/O NT_033892AL356113247259513RH289010143.64  10156.701 AL356113
S/G/Y/R/B/O NT_033892AL356113247259513RH33444  101226.00  1 AL356113
S/G/Y/R/B/O NT_033892AL356113247442583RH5120410140.19  10157.301 AL356113
S/G/Y/R/B/O NT_033892AL353583248391513RH10258810140.70    1 AL353583
S/G/Y/R/B/O NT_033892AL392104248650783RH9149710140.80    1 AL392104
S/G/Y/R/B/O NT_033892AL392104248662073RH14299  101223.00  1 AL392104
S/G/Y/R/B/O NT_033892AL355979250323913RH4503010147.42    1 AL355979
S/G/Y/R/B/O NT_033892AL355979250487533RH6641110138.43    1 AL355979
S/G/Y/R/B/O NT_033892AL157385251675423RH5121110150.48  10160.901 AL157385
S/G/Y/R/B/O NT_033892AL157385251700273RH7481410150.37    1 AL157385
S/G/Y/R/B/O NT_033892AL157385252272263RH7662110150.37    1 AL157385
S/G/Y/R/B/O NT_033892AL512598253452303RH5106510150.95  10161.701 AL512598
S/G/Y/R/B/O NT_033892AL139821253990813          
S/G/Y/R/B/O NT_033892AL354976256670733RH265010157.10  10166.601 AL445244
S/G/Y/R/B/O NT_033892AL354976256670733RH547  101248.00  1 AL445244
S/G/Y/R/B/O NT_033892AL161654256764093          
S/G/Y/R/B/O NT_033892AL355587259208533RH2557210163.38    1 AL355587, AL591023, AL591477
S/G/Y/R/B/O NT_033892AC018509260087323RH9288810163.28    1AL591114, AC018509, AL591023, AL591114
S/G/Y/R/B/O NT_033892AL591114261225541          
S/G/Y/R/B/O NT_033892 - RH7847610133.91    0  
S/G/Y/R/B/O NT_033892 - RH32882  101129.00  1AL157397, AL157397
S/G/Y/R/B/O NT_033892 - RH9303110140.70    0AL392104, AL392104
S/G/Y/R/B/O NT_033892 - RH33110  101083.00  1AC013552, AC021656, AC073586, AL158160, AC013552, AC021656, AC073586, AL158160
S/G/Y/R/B/O NT_033892 - RH38243  101050.00  1AL353790, AL353790