Chromosome 10 - RH Maps - Single Contig

Chromosome 10 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_024115	NT_024081	NT_033983	NT_033894	NT_033916	NT_008705	NT_033921	NT_033986
NT_033892	NT_033226	NT_033223	NT_033227	NT_033912	NT_033982	NT_033988	NT_033896
NT_024133	NT_033987	NT_033985	NT_031847	NT_030066	NT_030772	NT_033228	NT_008646
NT_017696	NT_031860	NT_033898	NT_033920	NT_008748	NT_033222	NT_033990	NT_024085
NT_033984	NT_008797	NT_033897	NT_008583	NT_033220	NT_033891	NT_033895	NT_033917
NT_033989	NT_033918	NT_033919	NT_033893	NT_024037	NT_030075	NT_033890	NT_024064
NT_030070	NT_008769	NT_033229	NT_030059	NT_008818	NT_033221	NT_031855	NT_031856
NT_008902	NT_030764	NT_027097	NT_024086	NT_025835	NT_033224	NT_033225	NT_024040
NT_017795	NT_028298

NT_033226

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_033226	AL590070	26211992	1
S/G/Y/R/B/O	NT_033226	AC012045	26216012	1
S/G/Y/R/B/O	NT_033226	AL591683	26310938	1
S/G/Y/R/B/O	NT_033226	AL358612	26379418	3
S/G/Y/R/B/O	NT_033226	AL391812	26557690	3	RH31132			10	1272.00			1	AL590070,	AL391812, AL590070
S/G/Y/R/B/O	NT_033226	AL360217	26578816	3
S/G/Y/R/B/O	NT_033226	AL162503	26665282	3	RH92482	10	160.96					1		AL162503, AL389927
S/G/Y/R/B/O	NT_033226	AL162503	26690904	3	RH2899	10	163.28			10	170.10	1		AL162503, AL389927
S/G/Y/R/B/O	NT_033226	AL162503	26690904	3	RH628			10	1269.00			1		AL162503, AL389927
S/G/Y/R/B/O	NT_033226	AL162503	26757046	3	RH51110	10	165.61	10	1272.00	10	171.60	1		AL162503, AL389927, AL591717
S/G/Y/R/B/O	NT_033226	AL162503	26757226	3	RH44061	10	165.50					1		AL162503, AL389927, AL591717
S/G/Y/R/B/O	NT_033226	AL355798	26798582	3
S/G/Y/R/B/O	NT_033226	AL160287	26925492	3	CHLC.GAAT13D02					10	171.40	1		AL160287, AL365218
S/G/Y/R/B/O	NT_033226	AL390961	27106156	3	RH51515	10	161.37			10	175.30	1		AC022245, AL138896, AL390961
S/G/Y/R/B/O	NT_033226	AL390961	27173340	3	RH41873	10	165.09					1		AC022245, AL138896, AL390961
S/G/Y/R/B/O	NT_033226	AL390961	27200028	3	RH51226	10	161.47			10	173.30	1		AC022245, AL138896, AL390961, AL591164
S/G/Y/R/B/O	NT_033226	AL139404	27287414	3	D10S593					10	175.20	1		AL139404, AL591164
S/G/Y/R/B/O	NT_033226	AL139404	27287414	3	RH31039			10	1302.00			1		AL139404, AL591164
S/G/Y/R/B/O	NT_033226	AL365501	27384237	3	RH92912	10	191.37					1		AL138896, AL365501
S/G/Y/R/B/O	NT_033226	AL162272	27456397	3	RH51026	10	166.73			10	171.30	1		AL162272
S/G/Y/R/B/O	NT_033226	AL162272	27519219	3	RH51004	10	168.63			10	172.40	1		AL162272
S/G/Y/R/B/O	NT_033226	AL162272	27545390	3	RH70636	10	167.36					1		AL162272
S/G/Y/R/B/O	NT_033226	AL162272	27560858	3	RH67109	10	191.19					1	AL160291,	AL160291, AL162272
S/G/Y/R/B/O	NT_033226	AL162272	27563463	3	RH17040	10	167.68					1	AL160291,	AL160291, AL162272
S/G/Y/R/B/O	NT_033226	AL162272	27563531	3	RH66293	10	167.08					1	AL160291,	AL160291, AL162272
S/G/Y/R/B/O	NT_033226	AL162272	27563534	3	RH40212	10	194.93					1	AL160291,	AL160291, AL162272
S/G/Y/R/B/O	NT_033226	AL162272	27564685	3	RH32302			10	1355.00			1	AL160291,	AL160291, AL162272
S/G/Y/R/B/O	NT_033226	AL160291	27598479	2	RH93714	10	191.58					1		AL160291, AL365228
S/G/Y/R/B/O	NT_033226	AL160291	27639633	2	RH45019	10	166.73					1		AL160291, AL365228
S/G/Y/R/B/O	NT_033226	AL160291	27648351	2	RH67024	10	169.05					1		AL160291, AL365228
S/G/Y/R/B/O	NT_033226	AL160291	27691558	2	RH40152	10	169.00					1		AL160291, AL365228
S/G/Y/R/B/O	NT_033226	AL160291	27698887	2	RH98463	10	169.69					1	AL390916,	AL160291, AL365228, AL390916
S/G/Y/R/B/O	NT_033226	AL390916	27736615	1
S/G/Y/R/B/O	NT_033226	AC005875	27800030	3	CHLC.GGAA7H02					10	178.30	2	AL355493, AL390916,	AC005875, AL355493, AL390916
S/G/Y/R/B/O	NT_033226	AC005875	27811777	3	CHLC.GATA3G07					10	180.50	2	AL355493, AL390916,	AC005875, AL355493, AL390916
S/G/Y/R/B/O	NT_033226		-		RH45070	10	168.74					0
S/G/Y/R/B/O	NT_033226		-		WI-10806					10	178.20	0