Chromosome 10 - RH Maps - Single Contig

Chromosome 10 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_024115	NT_024081	NT_033983	NT_033894	NT_033916	NT_008705	NT_033921	NT_033986
NT_033892	NT_033226	NT_033223	NT_033227	NT_033912	NT_033982	NT_033988	NT_033896
NT_024133	NT_033987	NT_033985	NT_031847	NT_030066	NT_030772	NT_033228	NT_008646
NT_017696	NT_031860	NT_033898	NT_033920	NT_008748	NT_033222	NT_033990	NT_024085
NT_033984	NT_008797	NT_033897	NT_008583	NT_033220	NT_033891	NT_033895	NT_033917
NT_033989	NT_033918	NT_033919	NT_033893	NT_024037	NT_030075	NT_033890	NT_024064
NT_030070	NT_008769	NT_033229	NT_030059	NT_008818	NT_033221	NT_031855	NT_031856
NT_008902	NT_030764	NT_027097	NT_024086	NT_025835	NT_033224	NT_033225	NT_024040
NT_017795	NT_028298

NT_027097

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_027097	AC091706	133163526	1	RH38021			10	6102.00			1		AC091706
S/G/Y/R/B/O	NT_027097	AC091706	133163547	1	RH76635	10	536.55					1		AC091706
S/G/Y/R/B/O	NT_027097	AC069024	133413254	1	RH41996	10	535.75					1	AC063960,	AC063960, AC069024, U82213
S/G/Y/R/B/O	NT_027097	AC063960	133453174	1	RH45823	10	536.55					1		AC063960
S/G/Y/R/B/O	NT_027097	AL135793	133581097	2	WI-21650					10	642.40	1		AL135793
S/G/Y/R/B/O	NT_027097	AL135793	133581097	2	RH51286	10	539.91					1		AL135793
S/G/Y/R/B/O	NT_027097	AL135793	133604545	2	SGC31995					10	642.00	1		AL135793
S/G/Y/R/B/O	NT_027097	AL135793	133604545	2	RH51152	10	538.37	10	6136.00			1		AL135793
S/G/Y/R/B/O	NT_027097	AL135793	133604654	2	RH10697	10	539.96					1		AL135793
S/G/Y/R/B/O	NT_027097	AL135793	133604683	2	RH26765	10	543.48					1		AL135793
S/G/Y/R/B/O	NT_027097	AL135793	133604693	2	RH9908	10	543.58					1		AL135793
S/G/Y/R/B/O	NT_027097	AL135793	133721473	2	RH103945	10	538.37					1	AC061711,	AC061711, AL135793
S/G/Y/R/B/O	NT_027097	AC061711	133768979	3	WI-17828					10	646.00	1		AC061711
S/G/Y/R/B/O	NT_027097	AC061711	133768979	3	RH51464	10	543.68					1		AC061711
S/G/Y/R/B/O	NT_027097	AC061711	133780124	3	RH44535	10	536.55					1
S/G/Y/R/B/O	NT_027097	AC061711	133780149	3	RH79571	10	536.45					1		AC061711
S/G/Y/R/B/O	NT_027097	AC061711	133782403	3	RH40260	10	536.55					1		AC061711
S/G/Y/R/B/O	NT_027097	AC061711	133782478	3	RH66233	10	543.58					1		AC061711
S/G/Y/R/B/O	NT_027097	AC061711	133792685	3	RH45782	10	536.55					1		AC061711
S/G/Y/R/B/O	NT_027097	AC061711	133798312	3	WI-22203					10	643.10	1	AF157623,	AC061711, AF157623
S/G/Y/R/B/O	NT_027097	AC061711	133798312	3	RH51168	10	541.46					1	AF157623,	AC061711, AF157623
S/G/Y/R/B/O	NT_027097	AC061711	133819104	3	RH69852	10	538.37					1	AF157623,	AC061711, AF157623
S/G/Y/R/B/O	NT_027097	AC061711	133864814	3	IB2169					10	641.30	1	AF157623, AL603764,	AC061711, AF157623, AL603764
S/G/Y/R/B/O	NT_027097	AC061711	133864814	3	RH51248	10	536.55					1	AF157623, AL603764,	AC061711, AF157623, AL603764
S/G/Y/R/B/O	NT_027097	AC061711	133864874	3	RH17074	10	536.55					1	AF157623, AL603764,	AC061711, AF157623, AL603764
S/G/Y/R/B/O	NT_027097	AF157623	133869404	3
S/G/Y/R/B/O	NT_027097	AL603764	133873997	1
S/G/Y/R/B/O	NT_027097	AJ243211	133944040	3
S/G/Y/R/B/O	NT_027097	AC069022	134174687	1	AFM338ZC9					10	644.60	1		AC069022
S/G/Y/R/B/O	NT_027097	AL359747	134224043	3	RH92311	10	538.37					1		AL359747
S/G/Y/R/B/O	NT_027097	AC073585	134246643	3	RH98409	10	536.55					1
S/G/Y/R/B/O	NT_027097	AC073585	134296028	3	WI-15113					10	640.80	1		AC073585
S/G/Y/R/B/O	NT_027097	AC073585	134296028	3	RH51428	10	536.55					1		AC073585
S/G/Y/R/B/O	NT_027097	AC073585	134328926	3	RH102633	10	536.55					1		AC073585
S/G/Y/R/B/O	NT_027097	AC073585	134364258	3	SGC32012					10	647.20	1		AC073585
S/G/Y/R/B/O	NT_027097	AC073585	134388248	3	SGC34259					10	643.00	1		AC073585
S/G/Y/R/B/O	NT_027097	AC073585	134388248	3	RH51213	10	545.50					1		AC073585
S/G/Y/R/B/O	NT_027097	AC073585	134395910	3	RH94240	10	536.65					1		AC073585
S/G/Y/R/B/O	NT_027097		-		SGC31812					10	641.10	1	AL683842,	AB025341, AL683842
S/G/Y/R/B/O	NT_027097		-		WI-21499					10	642.50	0		More than 15
S/G/Y/R/B/O	NT_027097		-		WI-18655					10	643.10	0
S/G/Y/R/B/O	NT_027097		-		WI-17476					10	646.60	1	AL133461,	AC013243, AL133461