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  Chromosome 10 - RH Maps - Single Contig
 

Chromosome 10 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_008583
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008583AC022361648719701          
S/G/Y/R/B/O NT_008583AC024598649310773RH5103410365.19  10432.801 AC024598
S/G/Y/R/B/O NT_008583AC067752650545483          
S/G/Y/R/B/O NT_008583AC067751652972103D10S576    10432.801AL133417, AC016212, AC067751, AL133417
S/G/Y/R/B/O NT_008583AC067751652974293RH30940  102762.00  1AL133417, AC016212, AC067751, AL133417
S/G/Y/R/B/O NT_008583AL133417653359323RH5118710355.48102756.00  1 AC016212, AL133417, AL353781
S/G/Y/R/B/O NT_008583AL133417653359323SGC32854    10431.001 AC016212, AL133417, AL353781
S/G/Y/R/B/O NT_008583AL133417653360753RH4407510365.16    1 AC016212, AL133417, AL353781
S/G/Y/R/B/O NT_008583AL133417653371743RH5119210365.16  10432.801 AC016212, AL133417, AL353781
S/G/Y/R/B/O NT_008583AL357125653947563          
S/G/Y/R/B/O NT_008583AL583888655097043          
S/G/Y/R/B/O NT_008583AL590502656837012RH5104210357.12    1 AL590502
S/G/Y/R/B/O NT_008583AL590502656837012WI-6844    10431.001 AL590502
S/G/Y/R/B/O NT_008583AL590502656838342RH9116710361.19    5AC026349, AC053504, AC090229, AJ312687, AL596094, AP002508, AC026349, AC053504, AC090229, AJ312687, AL590502, AL596094, AP002508
S/G/Y/R/B/O NT_008583AL590502656968982RH4788010356.83    1AL713895, AL590502, AL713895
S/G/Y/R/B/O NT_008583AL713895657057872RH1765  102775.00  1 AL713895
S/G/Y/R/B/O NT_008583AL713895657057892RH5149310362.47  10432.801 AL713895
S/G/Y/R/B/O NT_008583AL713895657058562RH6693610362.54    1 AL713895, AL713976
S/G/Y/R/B/O NT_008583AL713895657373042RH7558410361.96    1 AL713895
S/G/Y/R/B/O NT_008583AL607128657516533RH9898410361.19    1AL713895, AL607128, AL713895
S/G/Y/R/B/O NT_008583AL607128657518473RH8066110355.90    1AL713895, AL607128, AL713895
S/G/Y/R/B/O NT_008583AL607128657790703RH4559110361.76    1AL713895, AL607128, AL713895, AL713976
S/G/Y/R/B/O NT_008583AL607128657791583RH4481510354.43    1AL713895, AL607128, AL713895, AL713976
S/G/Y/R/B/O NT_008583AL607128658284493RH5152410361.76  10432.801AL713895, AL607128, AL713895
S/G/Y/R/B/O NT_008583AL607128658343693D10S561    10432.801 AL713976
S/G/Y/R/B/O NT_008583AL607128658343693RH4907710359.15102816.00  1 AL713976
S/G/Y/R/B/O NT_008583AL607128658397853RH4605310361.76    1AL713895, AL607128, AL713895
S/G/Y/R/B/O NT_008583AL607128658530603RH4020010362.85    1AL713895, AL607128, AL713895
S/G/Y/R/B/O NT_008583AC022022659184383RH4550710361.76    1 AC016197, AC022022
S/G/Y/R/B/O NT_008583AC022022659785243RH33738  102799.00  2 AC016197, AC022022, AC083997
S/G/Y/R/B/O NT_008583AL607062661130363RH6984210362.47    1 AC010863, AL607062
S/G/Y/R/B/O NT_008583AC022387661533403RH4029610362.57    1 AC010863, AC022387, AC022396
S/G/Y/R/B/O NT_008583AC022387661635603RH6763710377.60    2 AC010863, AC022387, AC022396
S/G/Y/R/B/O NT_008583AC069543663344493          
S/G/Y/R/B/O NT_008583AC044782665009323          
S/G/Y/R/B/O NT_008583AC012558665989303WI-3963    10434.601AC018977, AC012558, AC018977, AC060229
S/G/Y/R/B/O NT_008583AC012558666185073RH4246110363.97  10434.601AC018977, AC012558, AC018977
S/G/Y/R/B/O NT_008583AC018977666742123          
S/G/Y/R/B/O NT_008583AC027670668111423          
S/G/Y/R/B/O NT_008583AL512450670009473          
S/G/Y/R/B/O NT_008583AC013287670346283          
S/G/Y/R/B/O NT_008583AC069020672221373WI-5638    10434.601 AC069020
S/G/Y/R/B/O NT_008583AC024600674687393RH281010365.16    2 AC024600, AC024960
S/G/Y/R/B/O NT_008583AC024600674687393D10S557    10435.302 AC024600, AC024960
S/G/Y/R/B/O NT_008583AL590411675291953WI-10368    10434.701 AC091896, AL590411
S/G/Y/R/B/O NT_008583AL590411675866153CHLC.GATA82H09    10447.701 AL590411
S/G/Y/R/B/O NT_008583AL590324676059123          
S/G/Y/R/B/O NT_008583AL513321676079062          
S/G/Y/R/B/O NT_008583AL591687677868823          
S/G/Y/R/B/O NT_008583AL592466678015793          


  NT_008583 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008583AL390865679128503          
S/G/Y/R/B/O NT_008583AC020641681789603CHLC.GATA65A03    10434.601AC022538, AC020641, AC022538, AC092367
S/G/Y/R/B/O NT_008583AC020641682119173RH10379710357.02    1AC022538, AC020641, AC022538, AC092367
S/G/Y/R/B/O NT_008583AC022538682615193RH4606410366.37    1 AC022538
S/G/Y/R/B/O NT_008583AC022538683032253RH554  102897.00  1AC018979, AC018979
S/G/Y/R/B/O NT_008583AC018979684414503RH4421810366.37    1AP001355, AC018979, AP001355
S/G/Y/R/B/O NT_008583AC018979684415003WI-21189    10434.701AP001355, AC018979, AP001355
S/G/Y/R/B/O NT_008583AC018979684415003RH5155710366.87    1AP001355, AC018979, AP001355
S/G/Y/R/B/O NT_008583AC022017686444103CHLC.GATA62B04    10439.201AC021888, AC021888, AC022017
S/G/Y/R/B/O NT_008583AL592075686784463          
S/G/Y/R/B/O NT_008583AC027675690105831CHLC.GAAT5E04    10434.702AC016819, AC016819, AC027675
S/G/Y/R/B/O NT_008583AC021888687463691          
S/G/Y/R/B/O NT_008583AC007484688313981          
S/G/Y/R/B/O NT_008583AC016043688545671RH290710372.76  10441.101AC007484, AC007484, AC016043
S/G/Y/R/B/O NT_008583AC016043688545671RH1098  103136.00  1AC007484, AC007484, AC016043
S/G/Y/R/B/O NT_008583AC016043688907661RH1778310370.57    1AC007484, AC007484, AC016043, AC069538
S/G/Y/R/B/O NT_008583AP001355690814501          
S/G/Y/R/B/O NT_008583 - RH10381210357.02    0  
S/G/Y/R/B/O NT_008583 - RH14211  102786.00  0 AF110060
S/G/Y/R/B/O NT_008583 - RH10407410358.95    1AC016395, AC016395
S/G/Y/R/B/O NT_008583 - RH4415510365.81    0AL133417, AC016212, AL133417, AL353781
S/G/Y/R/B/O NT_008583 - RH4624010355.73    0AC068892, AC068892
S/G/Y/R/B/O NT_008583 - RH4762510365.81    1AC009985, AC010794, AL671972, AC009985, AC010794, AL671972
S/G/Y/R/B/O NT_008583 - RH4831310365.16    1AC009985, AC010794, AL671972, AC009985, AC010794, AL671972
S/G/Y/R/B/O NT_008583 - RH4864610356.70    1AC016395, AC016395
S/G/Y/R/B/O NT_008583 - RH5101610366.47    0AL133551, AL133551
S/G/Y/R/B/O NT_008583 - RH5127510365.81    1AC021447, AC025038, AC021447, AC025038
S/G/Y/R/B/O NT_008583 - RH5128710361.19    1AC024597, AC024597, AC024946, AC044780
S/G/Y/R/B/O NT_008583 - RH5137010365.16    1AC009985, AC010794, AL671972, AC009985, AC010794, AL671972
S/G/Y/R/B/O NT_008583 - RH5143310356.83    1AL136233, AL136233
S/G/Y/R/B/O NT_008583 - RH9205710356.83    1AC022029, AC022534, AL713957, AC022029, AC022534, AL713957
S/G/Y/R/B/O NT_008583 - RH9819310356.00    1AL133551, AL133551