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  Chromosome 10 - RH Maps - Single Contig
 

Chromosome 10 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_030075
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030075AC012046774519071RH1520210381.17    1 AC012046
S/G/Y/R/B/O NT_030075AC012046774519071RH540  103470.00  1 AC012046
S/G/Y/R/B/O NT_030075AC063962777543541RH4022410380.87    1 AC063962
S/G/Y/R/B/O NT_030075AC063962788904201RH4804610383.37    1 AC063962
S/G/Y/R/B/O NT_030075AL357037775576463RH4410210380.87    1AC012046, AC012046, AL357037
S/G/Y/R/B/O NT_030075AL357037775649613WI-2465    10459.901 AL357037
S/G/Y/R/B/O NT_030075AL357037775902823RH5120110383.37  10461.101 AL357037
S/G/Y/R/B/O NT_030075AL357037775903393RH7588710379.77    1 AL357037
S/G/Y/R/B/O NT_030075AL357037775903683RH7065610381.07    1 AL357037
S/G/Y/R/B/O NT_030075AL360225776812733          
S/G/Y/R/B/O NT_030075AC022540777918233RH6763710377.60    2AC022387, AC010863, AC022387, AC022396
S/G/Y/R/B/O NT_030075AC022540778286923RH32483  103464.0010459.901AC012046, AC012046, AC022540
S/G/Y/R/B/O NT_030075AC022540778286923RH5110810380.87    1AC012046, AC012046, AC022540
S/G/Y/R/B/O NT_030075AC022026779078193RH4619710381.26    1AC022540, AC022026, AC022540
S/G/Y/R/B/O NT_030075AC022026779932103RH5109910381.17103457.0010459.801AC091699, AC022026, AC091699
S/G/Y/R/B/O NT_030075AC091699781130371RH7547510379.87    1 AC091699
S/G/Y/R/B/O NT_030075AC025425780878121RH5137510380.97  10456.701 AC025425
S/G/Y/R/B/O NT_030075AC025425780878121RH8727  103349.00  1 AC025425
S/G/Y/R/B/O NT_030075AC025425780892801RH4019110380.97    1 AC025425
S/G/Y/R/B/O NT_030075AC025425780914081RH5114410381.07    1 AC025425
S/G/Y/R/B/O NT_030075AC025425780914081WI-11846    10452.701 AC025425
S/G/Y/R/B/O NT_030075AC025425782270591RH5120610382.39  10459.901 AC025425
S/G/Y/R/B/O NT_030075AC025425782270651RH6636210380.97    1 AC025425
S/G/Y/R/B/O NT_030075AC025425782271321RH1045610380.97    1 AC025425
S/G/Y/R/B/O NT_030075AC025425782420351RH8587  103361.00  1 AC025425
S/G/Y/R/B/O NT_030075AC025425782421401RH7808  103457.00  1 AC025425
S/G/Y/R/B/O NT_030075AC022393783617681RH10408810390.26    1AC010199, AC087586, AC010199, AC022393, AC087586
S/G/Y/R/B/O NT_030075AC022393784792621AFMA343XE1    10464.501AC010199, AC010199, AC022393
S/G/Y/R/B/O NT_030075AC010199783813301AFM320ZG1    10464.501AC022393, AC087586, AC010199, AC022393, AC087586
S/G/Y/R/B/O NT_030075AC087586783976381          
S/G/Y/R/B/O NT_030075AL512628785145513RH5138310390.26  10464.601AC010199, AC010199
S/G/Y/R/B/O NT_030075AL512628785751163RH7527110382.26    1 AC010193, AL512628
S/G/Y/R/B/O NT_030075AL512628785752303RH4027510390.26    1 AC010193, AL512628
S/G/Y/R/B/O NT_030075AL391421787343973RH4483810388.48    1 AC013252, AF352033, AL391421
S/G/Y/R/B/O NT_030075AL450306787594683RH1055410396.75    1 AC013252, AF352033, AL450306
S/G/Y/R/B/O NT_030075AL450306787595843RH1013310396.64    1 AC013252, AF352033, AL450306
S/G/Y/R/B/O NT_030075AL450306787669953RH9929910388.48    1 AC013252, AL450306
S/G/Y/R/B/O NT_030075AL450306787721863RH9858210388.77    1 AC013252, AL450306
S/G/Y/R/B/O NT_030075AL450306787760643RH10399510388.77    1 AC013252, AL450306
S/G/Y/R/B/O NT_030075AC022397788635741RH34274  103639.0010462.801AC084015, AC022397, AC055751, AC063928, AC063930, AC084015
S/G/Y/R/B/O NT_030075AC022397788636791RH1154  103633.00  1AC084015, AC022397, AC055751, AC063928, AC063930, AC084015
S/G/Y/R/B/O NT_030075AC022397788636791RH4901810393.40    1AC084015, AC022397, AC055751, AC063928, AC063930, AC084015
S/G/Y/R/B/O NT_030075AC022397815970881RH5105710388.77  10464.501AC084015, AC022397, AC055751, AC063928, AC063930, AC084015, AJ001217
S/G/Y/R/B/O NT_030075AC022397815992791RH4199710388.38    1AC084015, AC022397, AC055751, AC063930, AC084015, AJ001217
S/G/Y/R/B/O NT_030075AC022397815993761RH10220610388.77    1AC084015, AC022397, AC055751, AC063928, AC063930, AC084015
S/G/Y/R/B/O NT_030075AC018511790132503RH9257210383.37    1 AC018511
S/G/Y/R/B/O NT_030075AL392111790752643RH9413310383.16    1 AL392111
S/G/Y/R/B/O NT_030075AL392111791623463RH5133210383.16103481.00  1AC027393, AC027393, AL392111
S/G/Y/R/B/O NT_030075AL392111791623463SGC32818    10479.101AC027393, AC027393, AL392111
S/G/Y/R/B/O NT_030075AL390034792108723RH14242  103496.00  1AC027393, AC027393, AL390034


  NT_030075 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030075AL390034792145373RH4810010383.37    1AC027393, AC027393, AL390034
S/G/Y/R/B/O NT_030075AC027393792457171          
S/G/Y/R/B/O NT_030075AC010997792944491RH7033110383.16    1AC027393, AC010997, AC027393
S/G/Y/R/B/O NT_030075AC010997793402511RH5132610383.37  10461.101 AC010997
S/G/Y/R/B/O NT_030075AC010997793411151RH4443110383.37    1 AC010997
S/G/Y/R/B/O NT_030075AC010997793882911WI-3040    10450.301 AC010997
S/G/Y/R/B/O NT_030075AL645925794192283WI-11240    10461.101 AL645925
S/G/Y/R/B/O NT_030075AL596260794530513D10S556    10461.101 AL596260
S/G/Y/R/B/O NT_030075AL589863795842063RH4634610383.37    1AC010912, AC010912, AL589863
S/G/Y/R/B/O NT_030075AC074324797099011RH9326910385.67    1 AC074324
S/G/Y/R/B/O NT_030075AC074324797589911RH7010610386.48    1 AC074324
S/G/Y/R/B/O NT_030075AC010912796751851          
S/G/Y/R/B/O NT_030075AL607027797954223RH5122310385.67  10462.101 AL607027
S/G/Y/R/B/O NT_030075AL136451798257263RH284010385.57  10462.701 AL136451
S/G/Y/R/B/O NT_030075AL136451798257263RH805  103552.00  1 AL136451
S/G/Y/R/B/O NT_030075AL136451798363373RH4493210385.37    1 AL136451
S/G/Y/R/B/O NT_030075AC012047799743943RH6540910386.79    1 AC012047
S/G/Y/R/B/O NT_030075AC012048802368093RH6511810387.37    1 AC012048, AL136103
S/G/Y/R/B/O NT_030075AC012048802652473RH4952510387.37    1AC013286, AC012048, AC013286, AL136103
S/G/Y/R/B/O NT_030075AC012048802652473RH548  103538.00  1AC013286, AC012048, AC013286, AL136103
S/G/Y/R/B/O NT_030075AC013286803501943WI-5870    10462.801AC024603, AC013286, AC024603
S/G/Y/R/B/O NT_030075AC013286803903023RH1756110391.68    1AC024603, AC013286, AC024603
S/G/Y/R/B/O NT_030075AC024603804496313RH10430310387.37    1AC013285, AC013285, AC024603
S/G/Y/R/B/O NT_030075AC024603805144713RH8099110387.47    1AC013285, AC013285, AC024603
S/G/Y/R/B/O NT_030075AC024603805216293RH9132210387.37    1AC013285, AC013285, AC024603
S/G/Y/R/B/O NT_030075AC024603805260903RH4020210391.68    1AC013285, AC013285, AC024603
S/G/Y/R/B/O NT_030075AC024603805379603RH4245810391.68103557.00  1AC013285, AC013285, AC024603
S/G/Y/R/B/O NT_030075AC013285805469251          
S/G/Y/R/B/O NT_030075AC013738805881253          
S/G/Y/R/B/O NT_030075AC011439808227503RH2523810388.77    1 AC011439
S/G/Y/R/B/O NT_030075AC011439808227953RH4427910388.74    1 AC011439
S/G/Y/R/B/O NT_030075AC011439808302023RH5121010388.77  10464.501 AC011439
S/G/Y/R/B/O NT_030075AC011439808371833RH13988  103555.00  1 AC011439
S/G/Y/R/B/O NT_030075AC011439808397743RH5112110388.77  10464.501 AC011439
S/G/Y/R/B/O NT_030075AC011439808401353RH4029010388.77    1 AC011439
S/G/Y/R/B/O NT_030075AC024949809340881          
S/G/Y/R/B/O NT_030075AL157833810408383          
S/G/Y/R/B/O NT_030075AC021032811305743RH31143  103585.00  1AC067724, AC021032, AC067724
S/G/Y/R/B/O NT_030075AC012111812175641          
S/G/Y/R/B/O NT_030075AC067724812204361          
S/G/Y/R/B/O NT_030075AC022020812424061RH8022  103612.00  1AC067724, AC022020, AC067724, AL607037
S/G/Y/R/B/O NT_030075AC087418812986521          
S/G/Y/R/B/O NT_030075AC021027813023781          
S/G/Y/R/B/O NT_030075AL627447813167463RH9203710391.88    1AC013420, AC021027, AC022020, AC087418, AC013420, AC021027, AC022020, AC087418, AL607037, AL627447
S/G/Y/R/B/O NT_030075AC067745814542291RH31109  103597.00  1 AC067745
S/G/Y/R/B/O NT_030075AC013420814338211          
S/G/Y/R/B/O NT_030075AC084015816005021          
S/G/Y/R/B/O NT_030075 - RH10293810388.64    2AL133481, AL391665, AL133481, AL391665
S/G/Y/R/B/O NT_030075 - RH30868  103512.00  0  
S/G/Y/R/B/O NT_030075 - SGC44697    10458.700  


  NT_030075 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030075 - RH2605310388.54    2AC023161, AL133481, AL391665, AC023161, AC078775, AL133481, AL391665
S/G/Y/R/B/O NT_030075 - RH3666910388.54    2AC023161, AL133481, AL391665, AC023161, AC078775, AL133481, AL391665
S/G/Y/R/B/O NT_030075 - RH4455410388.64    0  
S/G/Y/R/B/O NT_030075 - RH4585810388.77    0AC012111, AC021032, AC022020, AC067724, AC012111, AC021032, AC022020, AC067724
S/G/Y/R/B/O NT_030075 - RH4754610388.64    1AL391665, AL139242, AL391665
S/G/Y/R/B/O NT_030075 - RH4821510388.64    1AC016820, AC010187, AC011795, AC016820, AC023800
S/G/Y/R/B/O NT_030075 - RH4952610390.16    1AC069537, AC069537
S/G/Y/R/B/O NT_030075 - RH5096610388.64    2AC023161, AL133481, AL391665, AC023161, AC078775, AL133481, AL391665
S/G/Y/R/B/O NT_030075 - RH5111910388.77    1AL391665, AL391665
S/G/Y/R/B/O NT_030075 - RH5122210388.74    2AC023161, AL133481, AL391665, AC023161, AC078775, AL133481, AL391665
S/G/Y/R/B/O NT_030075 - RH5124110388.64    2AC023161, AL133481, AL391665, AC023161, AC078775, AL133481, AL391665
S/G/Y/R/B/O NT_030075 - RH5137810388.64    2AC023161, AL133481, AL391665, AC023161, AC078775, AL133481, AL391665
S/G/Y/R/B/O NT_030075 - RH6856910390.06    1AL391665, AL139242, AL391665
S/G/Y/R/B/O NT_030075 - RH7029310390.06    1AL391665, AC006188, AL391665
S/G/Y/R/B/O NT_030075 - RH7115310381.27    0  
S/G/Y/R/B/O NT_030075 - RH7611410388.38    2AC023161, AL133481, AL391665, AC023161, AC078775, AL133481, AL391665
S/G/Y/R/B/O NT_030075 - RH8058310387.52    1AC013253, AL356753, AC013253, AL356753
S/G/Y/R/B/O NT_030075 - RH9246910383.37    0  
S/G/Y/R/B/O NT_030075 - RH9315310388.64    2AC068139, AL513174, AC010194, AC012043, AC068139, AC078775, AL513174
S/G/Y/R/B/O NT_030075 - RH9320010388.64    1AC068139, AC010194, AC068139, M30838
S/G/Y/R/B/O NT_030075 - RH989810388.64    1AL391665, AL139242, AL391665
S/G/Y/R/B/O NT_030075 - RH9932210388.64    1AL450398, AL450398