Chromosome 10 - RH Maps - Single Contig

Chromosome 10 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_024115	NT_024081	NT_033983	NT_033894	NT_033916	NT_008705	NT_033921	NT_033986
NT_033892	NT_033226	NT_033223	NT_033227	NT_033912	NT_033982	NT_033988	NT_033896
NT_024133	NT_033987	NT_033985	NT_031847	NT_030066	NT_030772	NT_033228	NT_008646
NT_017696	NT_031860	NT_033898	NT_033920	NT_008748	NT_033222	NT_033990	NT_024085
NT_033984	NT_008797	NT_033897	NT_008583	NT_033220	NT_033891	NT_033895	NT_033917
NT_033989	NT_033918	NT_033919	NT_033893	NT_024037	NT_030075	NT_033890	NT_024064
NT_030070	NT_008769	NT_033229	NT_030059	NT_008818	NT_033221	NT_031855	NT_031856
NT_008902	NT_030764	NT_027097	NT_024086	NT_025835	NT_033224	NT_033225	NT_024040
NT_017795	NT_028298

NT_033898

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_033898	AL607031	53182522	3
S/G/Y/R/B/O	NT_033898	AC022537	53236836	3	RH38031			10	2341.00			2	AC067748,	AC022537, AC067748
S/G/Y/R/B/O	NT_033898	AC022537	53266113	3	RH40168	10	317.26					1		AC012049, AC022537
S/G/Y/R/B/O	NT_033898	AC069079	53365525	3	RH51225	10	322.53			10	394.60	1		AC012049, AC016206, AC069079
S/G/Y/R/B/O	NT_033898	AL157399	53491624	3
S/G/Y/R/B/O	NT_033898	AC073584	53594583	3
S/G/Y/R/B/O	NT_033898	AC068062	53704494	3	RH46235	10	323.37					1		AC068062
S/G/Y/R/B/O	NT_033898	AC068062	53740082	3	RH51398	10	322.72			10	401.10	1		AC068062
S/G/Y/R/B/O	NT_033898	AL596105	53778239	3
S/G/Y/R/B/O	NT_033898	AL391378	53802756	3
S/G/Y/R/B/O	NT_033898	AC026228	54014433	3	RH2789	10	322.64			10	400.70	1	AC022025,	AC022025
S/G/Y/R/B/O	NT_033898	AC026228	54014573	3	RH1099			10	2545.00			1	AC022025,	AC022025, AC026228
S/G/Y/R/B/O	NT_033898	AC022025	54052145	3
S/G/Y/R/B/O	NT_033898	AC027118	54200230	3	RH33846			10	2562.00			1		AC027118
S/G/Y/R/B/O	NT_033898	AC027118	54259363	3	RH40167	10	319.75					1	AC074245,	AC027118, AC074245
S/G/Y/R/B/O	NT_033898	AC074245	54317366	1
S/G/Y/R/B/O	NT_033898	AC009986	54339792	1	RH70960	10	320.41					1	AC074245,	AC009986, AC074245
S/G/Y/R/B/O	NT_033898	AC009986	54363865	1	RH75138	10	325.04					1	AC074245,	AC009986, AC074245
S/G/Y/R/B/O	NT_033898	AC013729	54383298	1
S/G/Y/R/B/O	NT_033898	AC079270	54441651	1
S/G/Y/R/B/O	NT_033898	AC074327	54644088	3	RH103792	10	316.87					1	AC027676,	AC027676, AC044785, AC074327
S/G/Y/R/B/O	NT_033898	AC027676	54811324	1	RH50954	10	325.96			10	398.30	1		AC027676, AF080510
S/G/Y/R/B/O	NT_033898	AC027676	54811429	1	RH40309	10	321.58					1		AC027676, AF080510
S/G/Y/R/B/O	NT_033898	AC027676	54813680	1	RH1857			10	2474.00			1		AC027676, AC044785, AF080510
S/G/Y/R/B/O	NT_033898	AC027676	54816679	1	RH40310	10	323.18					1		AC027676
S/G/Y/R/B/O	NT_033898		-		RH103539	10	319.49					1		AL513306
S/G/Y/R/B/O	NT_033898		-		D10S220					10	382.80	1	AL117341,	AL117341
S/G/Y/R/B/O	NT_033898		-		RH26400	10	320.92					1	AC069547,	AC012131, AC069547, AL583858
S/G/Y/R/B/O	NT_033898		-		D10S196					10	385.60	1	AC069547,	AC069547
S/G/Y/R/B/O	NT_033898		-		RH46928	10	319.49					1	AL512366, AL589794,	AL512366, AL513306, AL589794
S/G/Y/R/B/O	NT_033898		-		RH51013	10	320.37			10	388.10	1	AC069547,	AC069547
S/G/Y/R/B/O	NT_033898		-		RH51261	10	316.36			10	389.30	1	AC069547,	AC012131, AC069547, AL583858
S/G/Y/R/B/O	NT_033898		-		RH78803	10	325.14					0
S/G/Y/R/B/O	NT_033898		-		D10S538					10	389.60	1	AC069547, AL117341,	AC069547, AL117341
S/G/Y/R/B/O	NT_033898		-		WI-4701					10	390.90	1	AL450382,	AC012131, AC055726, AL450382, AL583858
S/G/Y/R/B/O	NT_033898		-		WI-3208					10	393.30	1	AL117341,	AL117341
S/G/Y/R/B/O	NT_033898		-		WI-5856					10	393.30	1	AL512366,	AL512366, AL513306