Chromosome 10 - RH Maps - Single Contig

Chromosome 10 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_024115	NT_024081	NT_033983	NT_033894	NT_033916	NT_008705	NT_033921	NT_033986
NT_033892	NT_033226	NT_033223	NT_033227	NT_033912	NT_033982	NT_033988	NT_033896
NT_024133	NT_033987	NT_033985	NT_031847	NT_030066	NT_030772	NT_033228	NT_008646
NT_017696	NT_031860	NT_033898	NT_033920	NT_008748	NT_033222	NT_033990	NT_024085
NT_033984	NT_008797	NT_033897	NT_008583	NT_033220	NT_033891	NT_033895	NT_033917
NT_033989	NT_033918	NT_033919	NT_033893	NT_024037	NT_030075	NT_033890	NT_024064
NT_030070	NT_008769	NT_033229	NT_030059	NT_008818	NT_033221	NT_031855	NT_031856
NT_008902	NT_030764	NT_027097	NT_024086	NT_025835	NT_033224	NT_033225	NT_024040
NT_017795	NT_028298

NT_024037

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_024037	AC016823	75002883	1	RH48031	10	370.67					2	AC016826,	AC016823, AC016826
S/G/Y/R/B/O	NT_024037	AC016823	75007395	1	RH40230	10	370.67					2	AC016826,	AC016823, AC016826
S/G/Y/R/B/O	NT_024037	AC016823	75045918	1	RH74943	10	370.67					1		AC016823
S/G/Y/R/B/O	NT_024037	AC016823	75046596	1	RH40267	10	370.52					1		AC016823
S/G/Y/R/B/O	NT_024037	AC016823	75112777	1	RH44693	10	370.67					1		AC016823
S/G/Y/R/B/O	NT_024037	AC016823	75113364	1	RH68874	10	370.67					1		AC010159, AC016823, M86181
S/G/Y/R/B/O	NT_024037	AC016823	75113411	1	RH41802	10	370.67					1		AC010159, AC016823, M86181
S/G/Y/R/B/O	NT_024037	AC016823	75113491	1	RH40179	10	370.87					1		AC010159, AC016823, M86181
S/G/Y/R/B/O	NT_024037	AC073370	75293408	3	RH42284	10	375.67			10	450.00	1	AC022392,	AC022392, AC073370
S/G/Y/R/B/O	NT_024037	AC073370	75293408	3	RH38555			10	3234.00			1	AC022392,	AC022392, AC073370
S/G/Y/R/B/O	NT_024037	AC022392	75310344	3	RH65787	10	374.78					1		AC022392
S/G/Y/R/B/O	NT_024037	AC022392	75356096	3	RH51020	10	374.78					1		AC018579, AC022392
S/G/Y/R/B/O	NT_024037	AC022392	75356096	3	WI-6816					10	447.40	1		AC018579, AC022392
S/G/Y/R/B/O	NT_024037	AC022392	75356165	3	RH9986	10	374.58					1		AC018579, AC022392
S/G/Y/R/B/O	NT_024037	AC022392	75357835	3	RH67190	10	375.57					1		AC018579, AC022392
S/G/Y/R/B/O	NT_024037	AC022392	75359444	3	RH32427			10	3222.00			1		AC018579, AC022392
S/G/Y/R/B/O	NT_024037	AC022392	75393113	3	RH104093	10	374.78					1		AC018579, AC022392
S/G/Y/R/B/O	NT_024037	AC022392	75393629	3	RH10176	10	376.50					1		AC018579, AC022392
S/G/Y/R/B/O	NT_024037	AC022392	75394105	3	RH51276	10	374.78			10	450.00	1		AC022392
S/G/Y/R/B/O	NT_024037	AC022392	75394201	3	RH44084	10	375.57					1		AC022392
S/G/Y/R/B/O	NT_024037	AC022392	75449429	3	RH10193	10	375.61					1		AC018579
S/G/Y/R/B/O	NT_024037	AL607035	75516303	3	RH40235	10	374.68					1	AL683820,	AL607035, AL683820
S/G/Y/R/B/O	NT_024037	AL607035	75530584	3	RH17275	10	374.68					1	AL683820,	AL607035, AL683820
S/G/Y/R/B/O	NT_024037	AL683820	75572626	1	RH51506	10	374.88	10	3262.00			1		AC006186, AL683820
S/G/Y/R/B/O	NT_024037	AL683820	75572626	1	SGC31334					10	448.10	1		AC006186, AL683820
S/G/Y/R/B/O	NT_024037	AL683820	75573049	1	RH78653	10	374.68					1		AC006186, AL683820
S/G/Y/R/B/O	NT_024037	AL683820	75573416	1	RH10630	10	374.68					1		AL683820
S/G/Y/R/B/O	NT_024037	AL683820	75573494	1	RH44306	10	374.58					1		AC006186, AL683820
S/G/Y/R/B/O	NT_024037	AC091769	75630772	3	RH44259	10	374.58					1		AC068894, AC091769
S/G/Y/R/B/O	NT_024037	AC091769	75630835	3	RH51097	10	374.68			10	450.20	1		AC068894, AC091769
S/G/Y/R/B/O	NT_024037	AC091769	75665150	3	RH11031	10	375.57					1	AL683820,	AC091769, AL683820
S/G/Y/R/B/O	NT_024037	AC091769	75665490	3	RH80361	10	375.88					1	AL683820,	AC091769, AL683820
S/G/Y/R/B/O	NT_024037	AC091769	75698648	3	AFM127XE9					10	447.40	1		AC091769
S/G/Y/R/B/O	NT_024037	AC091769	75747540	3	RH76551	10	376.50					1		AC068894, AC091769
S/G/Y/R/B/O	NT_024037	AC091769	75779918	3	RH44916	10	375.50					1		AC091769
S/G/Y/R/B/O	NT_024037	AL356009	75789653	3
S/G/Y/R/B/O	NT_024037	AL513185	75820386	3	RH92364	10	374.78					1		AL513185
S/G/Y/R/B/O	NT_024037	AL513185	75902409	3	RH51228	10	374.58					1		AL513185
S/G/Y/R/B/O	NT_024037	AL513185	75902409	3	WI-16794					10	440.90	1		AL513185
S/G/Y/R/B/O	NT_024037	AL592212	75960778	3
S/G/Y/R/B/O	NT_024037	AC016542	76014232	3	RH44569	10	377.08					1		AC016542
S/G/Y/R/B/O	NT_024037	AC016542	76047461	3	RH51293	10	377.08	10	3286.00	10	453.00	1		AC016542
S/G/Y/R/B/O	NT_024037	AC016542	76074328	3	RH33709			10	3308.00			1		AC016542
S/G/Y/R/B/O	NT_024037	AC069548	76197265	3	CHLC.GATA87G01					10	455.10	1		AC069548
S/G/Y/R/B/O	NT_024037	AC069548	76198364	3	RH70386	10	379.16					1		AC069548
S/G/Y/R/B/O	NT_024037	AC069548	76230588	3	RH81037	10	376.50					1	AC024948,	AC024948, AC069548
S/G/Y/R/B/O	NT_024037	AC069548	76233082	3	RH98272	10	378.78					1	AC024948,	AC024948, AC069548
S/G/Y/R/B/O	NT_024037	AC024948	76305175	1	RH17681	10	379.37					1		AC024948
S/G/Y/R/B/O	NT_024037	AC024948	76366071	1	RH78867	10	378.78					1		AC024948
S/G/Y/R/B/O	NT_024037	AC068557	76368487	1

NT_024037 (cont)

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_024037	AC016394	76421350	1	RH40219	10	379.47					1		AC016394
S/G/Y/R/B/O	NT_024037	AC016394	76427636	1	RH91626	10	378.54					1	AC068557,	AC016394, AC068557
S/G/Y/R/B/O	NT_024037	AC016394	76427700	1	RH76701	10	378.64					1	AC068557,	AC016394, AC068557
S/G/Y/R/B/O	NT_024037	AC016394	76430232	1	RH67737	10	379.27					1	AC068557,	AC016394, AC068557
S/G/Y/R/B/O	NT_024037	AC016394	76435906	1	RH93350	10	378.78					1	AC068557,	AC016394, AC068557
S/G/Y/R/B/O	NT_024037	AL512656	76523505	3	RH98701	10	379.47					1	AC016394, AC068557,	AC016394, AC068557, AL512656
S/G/Y/R/B/O	NT_024037	AL512656	76524813	3	RH40249	10	378.78					1	AC016394, AC068557,	AC016394, AC068557, AL512656
S/G/Y/R/B/O	NT_024037	AL512656	76527001	3	RH8867			10	3339.00			1	AC016394, AC068557,	AC016394, AC068557, AL512656
S/G/Y/R/B/O	NT_024037	AL512656	76527791	3	RH51140	10	379.37	10	3407.00	10	453.10	1	AC016394,	AC016394, AL512656
S/G/Y/R/B/O	NT_024037	AL512656	76532125	3	RH51137	10	379.16			10	456.70	1	AC016394, AC068557,	AC016394, AC068557, AL512656
S/G/Y/R/B/O	NT_024037	AL512656	76532135	3	RH51564	10	378.78			10	456.70	1	AC016394, AC068557,	AC016394, AC068557, AL512656
S/G/Y/R/B/O	NT_024037	AL512656	76533769	3	RH66926	10	379.27					1	AC016394, AC068557,	AC016394, AC068557, AL512656
S/G/Y/R/B/O	NT_024037	AL512656	76534412	3	RH51106	10	378.44			10	453.10	1	AC016394, AC068557,	AC016394, AC068557, AL512656
S/G/Y/R/B/O	NT_024037	AL512656	76534528	3	RH51156	10	378.34			10	450.50	1	AC016394, AC068557,	AC016394, AC068557, AL512656
S/G/Y/R/B/O	NT_024037	AL512656	76539853	3	RH51576	10	378.75			10	456.70	1	AC016394,	AC016394, AL512656
S/G/Y/R/B/O	NT_024037	AL512656	76539905	3	RH40159	10	379.47					1	AC016394,	AC016394, AL512656
S/G/Y/R/B/O	NT_024037	AL512656	76543242	3	RH103216	10	378.75					1	AC016394, AC068557,	AC016394, AC068557, AL512656
S/G/Y/R/B/O	NT_024037	AL512656	76543251	3	RH76015	10	378.34					1	AC016394, AC068557,	AC016394, AC068557, AL512656
S/G/Y/R/B/O	NT_024037	AL512656	76595093	3	RH47852	10	380.97					1
S/G/Y/R/B/O	NT_024037	AL512656	76667903	3	RH51417	10	381.17			10	453.60	1		AL512656
S/G/Y/R/B/O	NT_024037	AL512656	76668241	3	RH8306			10	3367.00			1		AL512656
S/G/Y/R/B/O	NT_024037	AL512656	76668414	3	RH17592	10	380.97					1		AL512656
S/G/Y/R/B/O	NT_024037	AL353731	76705464	3	RH47719	10	380.97					1		AL353731
S/G/Y/R/B/O	NT_024037	AL353731	76724841	3	RH68072	10	380.97					1		AL353731
S/G/Y/R/B/O	NT_024037	AL353731	76729274	3	RH51391	10	380.37			10	458.10	1		AL353731
S/G/Y/R/B/O	NT_024037	AL353731	76729312	3	RH51548	10	380.97	10	3339.00	10	458.10	1		AL353731
S/G/Y/R/B/O	NT_024037	AL353731	76733369	3	RH38168			10	3367.00			1		AL353731
S/G/Y/R/B/O	NT_024037	AL353731	76736272	3	RH45189	10	381.07					1		AL353731
S/G/Y/R/B/O	NT_024037	AL353731	76736658	3	RH51484	10	381.17			10	456.70	1		AL353731
S/G/Y/R/B/O	NT_024037	AL359074	76759631	3	RH98703	10	381.07					1		AL359074
S/G/Y/R/B/O	NT_024037	AL359074	76845769	3	RH92705	10	380.97					1	AC073389,	AC073389, AL359074
S/G/Y/R/B/O	NT_024037	AL713896	76908278	1
S/G/Y/R/B/O	NT_024037	AC069517	76916257	1
S/G/Y/R/B/O	NT_024037	AC067748	76960770	1	RH38031			10	2341.00			2	AC022537,	AC022537, AC067748
S/G/Y/R/B/O	NT_024037	AC067748	77013071	1	RH14810			10	3417.00			1	AC069517,	AC067748, AC069517, AF377330, AL596247, X02419
S/G/Y/R/B/O	NT_024037	AC067748	77019440	1	RH92165	10	380.97					1	AC069517,	AC067748, AC069517, AF377330, AL596247, X02419, X12641, Y11873
S/G/Y/R/B/O	NT_024037	AC067748	77106385	1	RH51138	10	381.17			10	453.60	2	AC037447,	AC037447, AC067748
S/G/Y/R/B/O	NT_024037	AC067748	77116904	1	RH17303	10	380.97					2	AC022400, AC037447,	AC022400, AC037447, AC067748, AF042084
S/G/Y/R/B/O	NT_024037	AC067748	77116953	1	RH91666	10	381.07					2	AC022400, AC037447,	AC022400, AC037447, AC067748, AF042084
S/G/Y/R/B/O	NT_024037	AC067748	77117250	1	RH51446	10	381.07			10	458.20	2	AC022400, AC037447,	AC022400, AC037447, AC067748
S/G/Y/R/B/O	NT_024037	AC067748	77117278	1	RH51258	10	380.97			10	458.20	2	AC022400, AC037447,	AC022400, AC037447, AC067748
S/G/Y/R/B/O	NT_024037	AC022400	77135424	1	RH48498	10	380.97					2	AC037447,	AC022400, AC037447
S/G/Y/R/B/O	NT_024037	AC022400	77138813	1	RH51291	10	381.07			10	458.20	2	AC037447,	AC022400, AC037447
S/G/Y/R/B/O	NT_024037	AC022400	77140340	1	RH47830	10	380.97					2	AC037447,	AC022400, AC037447
S/G/Y/R/B/O	NT_024037	AC022400	77141756	1	RH44665	10	381.76					2	AC037447,	AC022400, AC037447
S/G/Y/R/B/O	NT_024037	AC022400	77141846	1	RH26283	10	382.19					2	AC037447,	AC022400, AC037447
S/G/Y/R/B/O	NT_024037	AC022400	77146886	1	RH51456	10	381.17			10	458.10	2	AC037447,	AC022400, AC037447
S/G/Y/R/B/O	NT_024037	AC022400	77147006	1	RH44071	10	380.97					2	AC037447,	AC022400, AC037447
S/G/Y/R/B/O	NT_024037	AC022400	77194312	1	WI-15534					10	358.10	5	AC037447, AL391137, AL450334, AL591684, AL603966,	AC022400, AC037447, AL391137, AL450334, AL591684, AL603966
S/G/Y/R/B/O	NT_024037	AC022400	77234757	1	RH44836	10	380.97					5	AC002992, AC004617, AC023670, AC037447,	AC002992, AC004617, AC023670, AC037447, AC073131, AC108717

NT_024037 (cont)

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_024037	AC073389	77276001	1	D10S188					10	458.20	1		AC073389
S/G/Y/R/B/O	NT_024037	AC073389	77276001	1	RH49000	10	380.97	10	3373.00			1		AC073389
S/G/Y/R/B/O	NT_024037	AC073389	77290362	1	RH41784	10	380.08					1		AC073389
S/G/Y/R/B/O	NT_024037		-		RH102916	10	381.07					0	AC073389,	AC073389
S/G/Y/R/B/O	NT_024037		-		RH14814			10	3370.00			0	AC022400, AC067748,	AC022400, AC067748, AF042084
S/G/Y/R/B/O	NT_024037		-		WI-3040					10	450.30	1	AC010997,	AC010997
S/G/Y/R/B/O	NT_024037		-		RH2907	10	372.76					1	AC007484, AC016043,	AC007484, AC016043
S/G/Y/R/B/O	NT_024037		-		RH8587			10	3361.00			1	AC025425,	AC025425
S/G/Y/R/B/O	NT_024037		-		WI-11846					10	452.70	1	AC025425,	AC025425
S/G/Y/R/B/O	NT_024037		-		RH40150	10	381.07					0
S/G/Y/R/B/O	NT_024037		-		RH8727			10	3349.00			1	AC025425,	AC025425
S/G/Y/R/B/O	NT_024037		-		RH40266	10	376.50					0
S/G/Y/R/B/O	NT_024037		-		RH40280	10	378.78					0
S/G/Y/R/B/O	NT_024037		-		RH44656	10	378.78					0	AC069548,	AC069548
S/G/Y/R/B/O	NT_024037		-		RH51231	10	375.16					1	AC067749,	AC067749
S/G/Y/R/B/O	NT_024037		-		RH51303	10	381.07					0
S/G/Y/R/B/O	NT_024037		-		RH65858	10	371.27					0
S/G/Y/R/B/O	NT_024037		-		RH80106	10	375.09					1	AC016821,	AC016821
S/G/Y/R/B/O	NT_024037		-		RH98929	10	380.97					0
S/G/Y/R/B/O	NT_024037		-		RH99109	10	374.68					1	AC007389,	AC007389