Chromosome 10 - RH Maps - Single Contig

Chromosome 10 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_024115	NT_024081	NT_033983	NT_033894	NT_033916	NT_008705	NT_033921	NT_033986
NT_033892	NT_033226	NT_033223	NT_033227	NT_033912	NT_033982	NT_033988	NT_033896
NT_024133	NT_033987	NT_033985	NT_031847	NT_030066	NT_030772	NT_033228	NT_008646
NT_017696	NT_031860	NT_033898	NT_033920	NT_008748	NT_033222	NT_033990	NT_024085
NT_033984	NT_008797	NT_033897	NT_008583	NT_033220	NT_033891	NT_033895	NT_033917
NT_033989	NT_033918	NT_033919	NT_033893	NT_024037	NT_030075	NT_033890	NT_024064
NT_030070	NT_008769	NT_033229	NT_030059	NT_008818	NT_033221	NT_031855	NT_031856
NT_008902	NT_030764	NT_027097	NT_024086	NT_025835	NT_033224	NT_033225	NT_024040
NT_017795	NT_028298

NT_024081

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_024081	AL133552	4373953	3
S/G/Y/R/B/O	NT_024081	AL157889	4498191	3	WI-5839					10	42.30	1		AL157889
S/G/Y/R/B/O	NT_024081	AL157889	4525423	3	RH42541	10	42.24			10	42.30	1		AL157889
S/G/Y/R/B/O	NT_024081	AL157889	4525423	3	RH33852			10	143.00			1		AL157889
S/G/Y/R/B/O	NT_024081	AC022535	4543408	1
S/G/Y/R/B/O	NT_024081	AL589165	4720378	3
S/G/Y/R/B/O	NT_024081	AC018978	4867931	3	RH40137	10	43.96					1		AC018978
S/G/Y/R/B/O	NT_024081	AC018978	4895402	3	RH49071	10	43.96	10	157.00			1		AC018978
S/G/Y/R/B/O	NT_024081	AC091817	5026924	3	RH75443	10	46.45					1		AC091817
S/G/Y/R/B/O	NT_024081	AC091817	5113093	3	RH92273	10	46.72					2	AL391427, AL713867, AL713867,	AC091817, AL391427, AL713867, AL713867
S/G/Y/R/B/O	NT_024081	AL713867	5137944	2	RH40288	10	47.19					2		AB032150, AL713867, AL713867, L32592
S/G/Y/R/B/O	NT_024081	AL713867	5138034	2	RH13926			10	161.00			2		AB032150, AL713867, AL713867
S/G/Y/R/B/O	NT_024081	AL713867	5150061	2	RH13926			10	161.00			2		AB032150, AL713867, AL713867
S/G/Y/R/B/O	NT_024081	AL713867	5150202	2	RH40288	10	47.19					2		AB032150, AL713867, AL713867, L32592
S/G/Y/R/B/O	NT_024081	AL713867	5151270	2	RH40271	10	46.72					1		AB032150, AL713867
S/G/Y/R/B/O	NT_024081	AL391427	5173719	1	RH92273	10	46.72					2	AC091817, AL713867, AL713867,	AC091817, AL391427, AL713867, AL713867
S/G/Y/R/B/O	NT_024081	AL391427	5267766	1	RH51264	10	48.24	10	161.00	10	49.50	1		AL391427
S/G/Y/R/B/O	NT_024081	AL391427	5267821	1	RH44100	10	48.24					1		AL391427
S/G/Y/R/B/O	NT_024081	AL355303	5378794	3	RH76033	10	49.60					1		AL355303
S/G/Y/R/B/O	NT_024081	AL355303	5378795	3	RH76268	10	52.32					1		AL355303
S/G/Y/R/B/O	NT_024081	AL355303	5440962	3	WI-598					10	52.70	1		AL355303
S/G/Y/R/B/O	NT_024081	AL355303	5446604	3	RH31122			10	181.00			1		AL355303
S/G/Y/R/B/O	NT_024081	AL355303	5446604	3	RH49520	10	52.22					1		AL355303
S/G/Y/R/B/O	NT_024081		-		RH101980	10	48.24					0
S/G/Y/R/B/O	NT_024081		-		RH1826			10	181.00			0
S/G/Y/R/B/O	NT_024081		-		WI-18301					10	49.30	0
S/G/Y/R/B/O	NT_024081		-		WI-17065					10	52.70	0