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  Chromosome 5 - RH Maps - Single Contig
 

Chromosome 5 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_006780
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006780AC0941041197333973          
S/G/Y/R/B/O NT_006780AC0940951199196793RH943865473.68    1AC094104, AC016663, AC094095, AC094104
S/G/Y/R/B/O NT_006780AC0940951199634923RH597355473.68  5381.101AC008494, AC008494, AC016663, AC094095
S/G/Y/R/B/O NT_006780AC0940951199722013RH920015473.68    1AC008494, AC008494, AC016663, AC094095
S/G/Y/R/B/O NT_006780AC0940951199990333RH916915473.68    1AC008494, AC008494, AC008585, AC016663, AC094095
S/G/Y/R/B/O NT_006780AC0940951200070113RH7842  54558.00  3AC008494, AL512662, AL589794, AC008494, AC008585, AC016663, AC094095, AL512662, AL513306, AL589794
S/G/Y/R/B/O NT_006780AC0084941200347013          
S/G/Y/R/B/O NT_006780AC0919811201075582          
S/G/Y/R/B/O NT_006780AC0205771201379821          
S/G/Y/R/B/O NT_006780AC0086281203271563RH600585473.58  5381.101 AC008628
S/G/Y/R/B/O NT_006780AC0102261203830603RH601515473.58  5381.101 AC008587, AC010226, AC091992
S/G/Y/R/B/O NT_006780AC0102261204117813RH932725474.30    1 AC008587, AC010226, AC026727, AC026789, AC091992
S/G/Y/R/B/O NT_006780AC0102261204148083RH1039135473.58    1AC010472, AC008587, AC010226, AC010472, AC026727, AC026789, AC091992
S/G/Y/R/B/O NT_006780AC0102261204179153RH7985  54564.00  1AC010472, AC008587, AC010226, AC010472, AC026727, AC026789, AC091992
S/G/Y/R/B/O NT_006780AC0102261204185723RH164695473.64    1AC010472, AC008587, AC010226, AC010472, AC026727, AC026789, AC091992
S/G/Y/R/B/O NT_006780AC0085491206087863SGC31607    5381.101 U80055
S/G/Y/R/B/O NT_006780AC0085491206087863RH598745471.85    1 U80055
S/G/Y/R/B/O NT_006780AC0085491206089483RH412615473.64    1AC026449, AC008549, AC010337, AC022111, AC026449, U80055
S/G/Y/R/B/O NT_006780AC0085491206322663RH600935473.14  5380.901AC026449, AC108109, AC008549, AC010337, AC022111, AC026449, AC108109
S/G/Y/R/B/O NT_006780AC0085491206335033RH411735473.14    1AC026449, AC108109, AC008549, AC010337, AC022111, AC026449, AC108109
S/G/Y/R/B/O NT_006780AC0085491206344223RH685625473.64    1AC026449, AC108109, AC008549, AC010337, AC022111, AC026449, AC108109
S/G/Y/R/B/O NT_006780AC0085491206346063RH597595473.58  5381.101AC026449, AC108109, AC008549, AC010337, AC022111, AC026449, AC108109
S/G/Y/R/B/O NT_006780AC0085491206366663RH795935473.58    1AC026449, AC108109, AC008549, AC022111, AC026449, AC108109
S/G/Y/R/B/O NT_006780AC0264491206712913          
S/G/Y/R/B/O NT_006780AC0102821207557343WI-3394    5381.101AC108109, AC010282, AC108109
S/G/Y/R/B/O NT_006780AC0102821207703133RH665565473.68    1AC108109, AC010282, AC016551, AC108109
S/G/Y/R/B/O NT_006780AC0102821208309583RH989995473.58    1AC034236, AC010282, AC034236
S/G/Y/R/B/O NT_006780AC0102821208314563RH984155473.58    1AC034236, AC010282, AC034236
S/G/Y/R/B/O NT_006780AC0102821208321703RH602645473.68  5381.101AC034236, AC010282, AC034236
S/G/Y/R/B/O NT_006780AC0102821208323103RH163285474.35    1AC034236, AC034236
S/G/Y/R/B/O NT_006780AC0102821208356933RH984775473.64    1AC034236, AC010282, AC034236
S/G/Y/R/B/O NT_006780AC0342361208887871RH410935473.64    1 AC034236
S/G/Y/R/B/O NT_006780AC1081091208927061          
S/G/Y/R/B/O NT_006780AC0104721208938592          
S/G/Y/R/B/O NT_006780AC1094561210287193RH665905478.64    1AC018752, AC008596, AC018752, AC109456
S/G/Y/R/B/O NT_006780AC1094561210420563RH1041165476.34    2AC018752, AC018752, AC008596, AC008596, AC018752, AC018752, AC109456, AC109456
S/G/Y/R/B/O NT_006780AC1094561210515963RH14483  54584.00  1AC018752, AC008596, AC018752, AC109456
S/G/Y/R/B/O NT_006780AC1094561210515963RH597255474.81  5382.901AC018752, AC008596, AC018752, AC109456
S/G/Y/R/B/O NT_006780AC1094561210562673RH1041165476.34    2AC018752, AC018752, AC008596, AC008596, AC018752, AC018752, AC109456, AC109456
S/G/Y/R/B/O NT_006780AC0187521211047843RH410955474.20    1 AC008596, AC018752
S/G/Y/R/B/O NT_006780AC0187521211090963RH411005474.81    1 AC008431, AC018752
S/G/Y/R/B/O NT_006780AC0187521211151753RH666815474.91    1 AC008431, AC008596, AC018752
S/G/Y/R/B/O NT_006780AC0187521211494953RH412055478.78    1 AC008431, AC018752
S/G/Y/R/B/O NT_006780 - RH702885473.58    0AC008549, AC008549, AC022111
S/G/Y/R/B/O NT_006780 - RH14731  54556.00  1AC034224, AC116428, AC034224, AC116428
S/G/Y/R/B/O NT_006780 - RH784555473.17    0  
S/G/Y/R/B/O NT_006780 - RH789595473.58    0  
S/G/Y/R/B/O NT_006780 - RH912575473.68    0