Home    Genome Browser    BLAT Search    Help
  Chromosome 5 - RH Maps - Single Contig
 

Chromosome 5 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_030685
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030685AC0206751212778581          
S/G/Y/R/B/O NT_030685AC0691181212947151          
S/G/Y/R/B/O NT_030685AC1142951213534601          
S/G/Y/R/B/O NT_030685AC0935341214564353          
S/G/Y/R/B/O NT_030685AC0102671215881173          
S/G/Y/R/B/O NT_030685AC0919861217730783SGC31266    5381.101AC010267, AC025088, AC008484, AC010267, AC025088, AC026431, AC091986
S/G/Y/R/B/O NT_030685AC0919861217730783RH597635473.58    1AC010267, AC025088, AC008484, AC010267, AC025088, AC026431, AC091986
S/G/Y/R/B/O NT_030685AC0919861218295373RH118605473.64    1AC025088, AC025088, AC091986
S/G/Y/R/B/O NT_030685AC0250881218662131          
S/G/Y/R/B/O NT_030685AC0086511219239203RH641462020.36    2AL109976, AC008651, AL109976
S/G/Y/R/B/O NT_030685AC0086511219440253CHLC.GATA50C10    5381.101 AC008651
S/G/Y/R/B/O NT_030685AC0273041220169113RH930585473.68    1 AC027304, AC034210, AC108124
S/G/Y/R/B/O NT_030685AC0085241220240553SGC35133    5381.201AC027304, AC008524, AC027304, AC034210, AC108124
S/G/Y/R/B/O NT_030685AC0085241220240553RH600305473.58    1AC027304, AC008524, AC027304, AC034210, AC108124
S/G/Y/R/B/O NT_030685AC0085241220240553RH687605473.68    1AC027304, AC008524, AC027304, AC034210, AC108124
S/G/Y/R/B/O NT_030685AC0085241220378223RH930045473.68    1AC027304, AC008524, AC010233, AC027304, AC034210, AC108124
S/G/Y/R/B/O NT_030685AC0085241220515153RH913805474.35    1AC027304, AC008524, AC010233, AC027304, AC034210, AC108124
S/G/Y/R/B/O NT_030685AC0085241220779683WI-10774    5381.101 AC108124
S/G/Y/R/B/O NT_030685AC0085241220795113RH480725473.64    1AC027304, AC008524, AC010233, AC010497, AC027304, AC034210, AC108124
S/G/Y/R/B/O NT_030685AC0085241221006243RH603355473.68  5381.201 AC008524, AC010233, AC010497, AC108124
S/G/Y/R/B/O NT_030685AC0085241221007543RH165405473.58    1 AC008524, AC010497, AC108124
S/G/Y/R/B/O NT_030685AC0102961221156213RH657765474.25    1AC008524, AC008524, AC010233, AC010296, AC010497, AC108124
S/G/Y/R/B/O NT_030685AC0102961221173363WI-14893    5381.101AC008524, AC008524, AC010233, AC010296, AC010497, AC025369, AC108124
S/G/Y/R/B/O NT_030685AC0102961221173363RH603315473.58    1AC008524, AC008524, AC010233, AC010296, AC010497, AC025369, AC108124
S/G/Y/R/B/O NT_030685AC0102961221185483RH181675473.68    1AC008524, AC008524, AC010233, AC010296, AC010497, AC108124
S/G/Y/R/B/O NT_030685AC0102961221399193RH360415473.64    1AC008524, AC008524, AC010233, AC010296, AC010497, AC025369, AC108124
S/G/Y/R/B/O NT_030685AC0102961221413323RH767875473.68    1AC008524, AC008524, AC010233, AC010296, AC010497, AC108124
S/G/Y/R/B/O NT_030685AC0102961221416823RH766435480.02    1AC008524, AC008524, AC010233, AC010296, AC010497, AC108124
S/G/Y/R/B/O NT_030685AC0102961221429573RH411285473.58    1AC008524, AC008524, AC010233, AC010296, AC010497, AC108124
S/G/Y/R/B/O NT_030685AC0102961221437883RH601065478.64  5383.001AC008524, AC008524, AC010233, AC010296, AC010497, AC108124
S/G/Y/R/B/O NT_030685AC0102961221440523RH184055473.64    1AC008524, AC008524, AC010233, AC010296, AC010497, AC108124
S/G/Y/R/B/O NT_030685AC0932951223302303          
S/G/Y/R/B/O NT_030685AC1121801225340613          
S/G/Y/R/B/O NT_030685AC0102761226767603RH598645474.30  5383.101 AC010276, AC022940
S/G/Y/R/B/O NT_030685AC0273411228494613RH63525476.44  5384.801AC024383, AC024383
S/G/Y/R/B/O NT_030685AC0735381228513713          
S/G/Y/R/B/O NT_030685AC1143221229212271          
S/G/Y/R/B/O NT_030685AC0243831229537481          
S/G/Y/R/B/O NT_030685AC1149451229942751          
S/G/Y/R/B/O NT_030685AC0220931231307973RH62105479.40  5385.601 AC022093
S/G/Y/R/B/O NT_030685AC0220931231307973RH30437  54623.00  1 AC022093
S/G/Y/R/B/O NT_030685AC1133441231797121          
S/G/Y/R/B/O NT_030685AC1143131232411411          
S/G/Y/R/B/O NT_030685AC0223101232411422          
S/G/Y/R/B/O NT_030685 - RH411915474.81    0  
S/G/Y/R/B/O NT_030685 - RH412055478.78    1AC018752, AC008431, AC018752
S/G/Y/R/B/O NT_030685 - RH756175474.40    0