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  Chromosome 5 - RH Maps - Single Contig
 

Chromosome 5 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_006731
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006731AC012605950091841RH601385408.96  5304.201AC020919, AC021564, AC008500, AC012605, AC020919, AC021564
S/G/Y/R/B/O NT_006731AC012605950091841RH8898  53764.00  1AC020919, AC021564, AC008500, AC012605, AC020919, AC021564
S/G/Y/R/B/O NT_006731AC012605950096971RH1031165409.06    1AC020919, AC021564, AC008500, AC012605, AC020919, AC021564
S/G/Y/R/B/O NT_006731AC012605950110581RH1037865409.99    1AC020919, AC021564, AC008500, AC012605, AC020919, AC021564
S/G/Y/R/B/O NT_006731AC021564948616131          
S/G/Y/R/B/O NT_006731AC104127948729791          
S/G/Y/R/B/O NT_006731AC013344949074701          
S/G/Y/R/B/O NT_006731AC020919950281382RH599025409.14  5304.101AC012605, AC012619, AC021564, AC114961, AC008500, AC012605, AC012619, AC020919, AC021564, AC114961
S/G/Y/R/B/O NT_006731AC020919950377642RH921615409.56    1AC012605, AC012619, AC021564, AC114961, AC008500, AC012605, AC012619, AC020919, AC020933, AC021564, AC114961
S/G/Y/R/B/O NT_006731AC114961950508081          
S/G/Y/R/B/O NT_006731AC012619950707043          
S/G/Y/R/B/O NT_006731AC008516951508362RH666215411.66    1AC114961, AC008516, AC024349, AC106818, AC114961
S/G/Y/R/B/O NT_006731AC010242951936501RH8972  53780.00  1AC008516, AC008516, AC010242, AC024349, AC106818, X12795
S/G/Y/R/B/O NT_006731AC010242952178741RH265885408.96    1AC008516, AC008516, AC010242, AC024349, AC106818
S/G/Y/R/B/O NT_006731AC108102953406893RH412605408.96    2AC010242, AC094091, AC010242, AC013682, AC094091, AC108102
S/G/Y/R/B/O NT_006731AC099501954023063RH922205408.96    1AC106808, AC013682, AC099501, AC106808
S/G/Y/R/B/O NT_006731AC106808954118071          
S/G/Y/R/B/O NT_006731AC114980954789841          
S/G/Y/R/B/O NT_006731AC019025954902661          
S/G/Y/R/B/O NT_006731AC093268955853331          
S/G/Y/R/B/O NT_006731AC021807955916581          
S/G/Y/R/B/O NT_006731AC021484958065961RH1023795412.73    1AC104127, AC104127
S/G/Y/R/B/O NT_006731AC010283958871173RH602265410.85  5312.001AC010448, AC021484, AC104127, AC010283, AC010448, AC021484, AC104127
S/G/Y/R/B/O NT_006731AC010283959366333RH985325413.00    1AC010448, AC010283, AC010448
S/G/Y/R/B/O NT_006731AC010283959366753RH412115412.36    1AC010448, AC010283, AC010448
S/G/Y/R/B/O NT_006731AC010448959965103          
S/G/Y/R/B/O NT_006731AC007833961435661RH809375411.17    1AC018806, AC007833, AC018806
S/G/Y/R/B/O NT_006731AC093311960740341RH482175587.10    3AC021800, AC093267, AC093505, AC021239, AC021800, AC091991, AC093267, AC093311, AC093505
S/G/Y/R/B/O NT_006731AC018806961300531          
S/G/Y/R/B/O NT_006731AC025766962059873          
S/G/Y/R/B/O NT_006731AC008534963172533RH124635415.84    1AC018806, AC008534, AC018806
S/G/Y/R/B/O NT_006731AC008534963172913RH259295413.00    1AC018806, AC008534, AC018806
S/G/Y/R/B/O NT_006731AC008534963272953RH1021815413.00    1AC018806, AC008534, AC018806
S/G/Y/R/B/O NT_006731AC008534963281753RH602255413.54  5312.101AC018806, AC008534, AC018806
S/G/Y/R/B/O NT_006731AC008534963282273RH663185413.00    1AC018806, AC008534, AC018806
S/G/Y/R/B/O NT_006731AC008534963282943RH107055413.75    1AC018806, AC008534, AC018806
S/G/Y/R/B/O NT_006731AC008534963362053RH604005413.85  5311.601AC018806, AC008534, AC018806
S/G/Y/R/B/O NT_006731AC008534963362083RH263805412.30    1AC018806, AC008534, AC018806
S/G/Y/R/B/O NT_006731AC008534963362393RH100805413.85    1AC018806, AC008534, AC018806
S/G/Y/R/B/O NT_006731AC008534964681723AFM205WG7    5313.401AC012312, AC012312
S/G/Y/R/B/O NT_006731AC012312965396033          
S/G/Y/R/B/O NT_006731AC011205966146491          
S/G/Y/R/B/O NT_006731AC099507966154252          
S/G/Y/R/B/O NT_006731AC009680966554541          
S/G/Y/R/B/O NT_006731AC010429967723943RH286365415.66    1AC009680, AC099507, AC099509, AC009680, AC010429, AC099507, AC099509
S/G/Y/R/B/O NT_006731AC010429968371943RH599645413.64  5312.102AC008471, AC026446, AC008471, AC010429, AC026446
S/G/Y/R/B/O NT_006731AC010429968371943RH103625415.25    2AC008471, AC026446, AC008471, AC010429, AC026446
S/G/Y/R/B/O NT_006731AC106749969030693          
S/G/Y/R/B/O NT_006731AC108122969320473          
S/G/Y/R/B/O NT_006731AC091824969891773          


  NT_006731 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006731AC026408970956463          
S/G/Y/R/B/O NT_006731AC012625971594563          
S/G/Y/R/B/O NT_006731AC008517973620863CHLC.GATA5F09    5303.801 AC008517, AC010640
S/G/Y/R/B/O NT_006731AC008517974485253RH929315406.78    1 AC008517, AC010640
S/G/Y/R/B/O NT_006731AC026781974863723          
S/G/Y/R/B/O NT_006731AC026780975013003          
S/G/Y/R/B/O NT_006731 - RH255105412.62    0AC008821, AC008821
S/G/Y/R/B/O NT_006731 - RH666385413.54    0