Home    Genome Browser    BLAT Search    Help
  Chromosome 5 - RH Maps - Single Contig
 

Chromosome 5 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_006679
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006679AC025443359861393          
S/G/Y/R/B/O NT_006679AC109475361448142WI-10830    580.401 AC109475
S/G/Y/R/B/O NT_006679AC093506360849411          
S/G/Y/R/B/O NT_006679AC013581362002871          
S/G/Y/R/B/O NT_006679AC093279362014973          
S/G/Y/R/B/O NT_006679AC114302363550353          
S/G/Y/R/B/O NT_006679AC025754364871173WI-14617    5127.201AC016602, AC008950, AC016602, AC025754
S/G/Y/R/B/O NT_006679AC025754364871173RH601145129.40    1AC016602, AC008950, AC016602, AC025754
S/G/Y/R/B/O NT_006679AC016602365595283RH673095124.17    1 AC008950, AC016602
S/G/Y/R/B/O NT_006679AC026801365983533RH152955124.17    1AC016602, AC025769, AC016602, AC025769
S/G/Y/R/B/O NT_006679AC026801365984983RH750  51299.00  1AC016602, AC025769, AC008690, AC016602, AC025269, AC025769, AC026801, AC055815, AC107616
S/G/Y/R/B/O NT_006679AC026801366679203RH472635128.77    1 AC008690, AC025269, AC026801, AC055815, AC107616
S/G/Y/R/B/O NT_006679AC026801366680763RH172605124.27    1 AC008690, AC025269, AC026801, AC055815, AC107616
S/G/Y/R/B/O NT_006679AC026801366681013RH367785123.87    1 AC008690, AC026801, AC055815, AC107616
S/G/Y/R/B/O NT_006679AC026801367222223WI-11211    5134.201 AC008690, AC008855, AC011145, AC026801, AC055815, AC107616
S/G/Y/R/B/O NT_006679AC026801367411063RH412105124.17    1AC008795, AC008690, AC008795, AC011145, AC026801, AC107616
S/G/Y/R/B/O NT_006679AC026801367433363RH929525124.37    1AC008795, AC008795, AC011145, AC026801, AC107616
S/G/Y/R/B/O NT_006679AC026801367442963RH939835124.27    1AC008795, AC008690, AC008795, AC011145, AC026801, AC107616
S/G/Y/R/B/O NT_006679AC026801367609783RH940855124.27    1AC008795, AC008690, AC008795, AC011145, AC026801
S/G/Y/R/B/O NT_006679AC008795367942683RH452425124.27    1 AC008795, AC011145
S/G/Y/R/B/O NT_006679AC008795368289893RH363985124.27    1AC010368, AC008795, AC010368, AC011145, AC025447
S/G/Y/R/B/O NT_006679AC008795368337483RH600515124.27    1AC010368, AC008795, AC010368, AC011145, AC025447
S/G/Y/R/B/O NT_006679AC008795368337483SGC33361    5130.901AC010368, AC008795, AC010368, AC011145, AC025447
S/G/Y/R/B/O NT_006679AC008795368337973RH179375124.27    1AC010368, AC008795, AC010368, AC011145, AC025447
S/G/Y/R/B/O NT_006679AC010368368631283RH781895128.77    1 AC010368, AC011145, AC025447
S/G/Y/R/B/O NT_006679AC010368368689573RH991715124.27    1 AC010368, AC011145, AC025447
S/G/Y/R/B/O NT_006679AC010368368915273RH412395124.17    1 AC010368, AC025447
S/G/Y/R/B/O NT_006679AC010368368916683RH1020425127.13    1 AC025447
S/G/Y/R/B/O NT_006679AC010368369001553RH411185124.27    1 AC010368, AC025447
S/G/Y/R/B/O NT_006679AC010368369003153RH7850  51320.00  1 AC010368, AC025447
S/G/Y/R/B/O NT_006679AC010368369708323RH161735124.17    1AC010375, AC091851, AC010368, AC010375, AC091851
S/G/Y/R/B/O NT_006679AC010375370285271WI-5001    5128.601AC091851, AC010375, AC091851
S/G/Y/R/B/O NT_006679AC091851369929751          
S/G/Y/R/B/O NT_006679AC025769370085181RH2023  191824.00  3 AC058798
S/G/Y/R/B/O NT_006679AC025769375171971RH1529619236.24    2AC008537, AC008537, AC025769, NG_000008
S/G/Y/R/B/O NT_006679AC025769375738721RH1854  191855.00  2AC008537, AC008537, AC025769, NG_000008, U22027
S/G/Y/R/B/O NT_006679AC025769375739561RH1162619235.36    3AC008537, AC008537, AC008537, AC008537, AC025769, AC025769, NG_000008, NG_000008, U22027
S/G/Y/R/B/O NT_006679AC025769375752821RH1171619235.36    4AC008537, AC008537, AC008962, AC008537, AC008537, AC008962, AC025769, AC025769, AC058798, NG_000008, NG_000008, NG_000008, U22027, U22028
S/G/Y/R/B/O NT_006679AC025769376160491RH5571619235.07191820.0019313.202AC008537, AC008537, AC025769, NG_000008
S/G/Y/R/B/O NT_006679AC026731371081423          
S/G/Y/R/B/O NT_006679AC027347372668933RH30906  51371.00  1AC008929, AC008929
S/G/Y/R/B/O NT_006679AC008929372761143D5S1436    5134.101AC034179, AC116365, AC034179, AC116365
S/G/Y/R/B/O NT_006679AC034179373144821          
S/G/Y/R/B/O NT_006679AC116365373307271          
S/G/Y/R/B/O NT_006679AC025448373908152          
S/G/Y/R/B/O NT_006679 - RH597195123.37    0AC010631, AC010631