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  Chromosome 5 - RH Maps - Single Contig
 

Chromosome 5 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_006790
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006790AC008897727978303RH13938  52687.00  1AC112183, AC008897, AC016640, AC112183, AF273765
S/G/Y/R/B/O NT_006790AC008897727993763RH472945371.33    1AC112183, AC008897, AC016640, AC112183, AF273765
S/G/Y/R/B/O NT_006790AC008897728002213RH266195366.77    1 AC016640
S/G/Y/R/B/O NT_006790AC008897728013323SGC32327    12514.301AC112183, AC008897, AC112183
S/G/Y/R/B/O NT_006790AC008897728013323RH32363  52690.00  1AC112183, AC008897, AC112183
S/G/Y/R/B/O NT_006790AC008897728051143RH411925366.26    1AC112183, AC008897, AC016640, AC112183
S/G/Y/R/B/O NT_006790AC008897728079323RH1040495371.72    1AC112183, AC008897, AC016640, AC112183
S/G/Y/R/B/O NT_006790AC008897728085913RH37865  52694.00  1AC112183, AC008897, AC016640, AC112183
S/G/Y/R/B/O NT_006790AC008897728355963WI-9815    5264.001AC016606, AC112183, AC008897, AC016606, AC016640, AC112183, AF232935
S/G/Y/R/B/O NT_006790AC016606728391823          
S/G/Y/R/B/O NT_006790AC112183728839103RH805485371.72    1AC116341, AC112183, AC116341
S/G/Y/R/B/O NT_006790AC116341729410081          
S/G/Y/R/B/O NT_006790AC026424730367223RH602955364.5952663.005267.501AC010245, AC008488, AC010245, AC026424
S/G/Y/R/B/O NT_006790AC026424730370203RH786735361.53    1AC010245, AC008488, AC010245, AC026424
S/G/Y/R/B/O NT_006790AC026424730489833RH464625364.59    1AC010245, AC008488, AC010245, AC026424
S/G/Y/R/B/O NT_006790AC010245731117023RH38113  52717.00  1 AC008488, AC010245
S/G/Y/R/B/O NT_006790AC025170731285433RH410905371.74    1 AC008488, AC025170
S/G/Y/R/B/O NT_006790AC108120732361882          
S/G/Y/R/B/O NT_006790AC073339733535741          
S/G/Y/R/B/O NT_006790 - RH14087  52500.00  1AC093223, AC109996, AC093223, AC109996
S/G/Y/R/B/O NT_006790 - RH14733  52493.00  1AC015470, AC109996, AC015470, AC109996
S/G/Y/R/B/O NT_006790 - RH33019  52521.00  2AC011244, AC044797, AC044800, AB048533, AC011244, AC044797, AC044800, U80017
S/G/Y/R/B/O NT_006790 - RH38121  52525.00  1AC020901, AC026436, AC020901, AC026436
S/G/Y/R/B/O NT_006790 - RH42914  52524.00  4AC004999, AC010217, AC016554, AC090439, AC090439, AC004999, AC010217, AC012369, AC016554, AC090439, AC090439, AC109487
S/G/Y/R/B/O NT_006790 - RH8936  52525.00  5AC010237, AC011244, AC023817, AC044800, AC093243, AC108108, AL133255, AL157879, AC010237, AC011244, AC023817, AC044800, AC093243, AC093247, AC108108, AC114970, AL009030, AL133255, AL157879, AL161433