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  Chromosome 5 - RH Maps - Single Contig
 

Chromosome 5 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_006519
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006519AC0161551883422081RH655405649.09    1AC104115, AC016155, AC104115
S/G/Y/R/B/O NT_006519AC1041151883642002          
S/G/Y/R/B/O NT_006519AC0922901884343533RH100055650.30    1AC104115, AC092290, AC104115
S/G/Y/R/B/O NT_006519AC0922901884355223RH803345653.59    1AC104115, AC092290, AC104115
S/G/Y/R/B/O NT_006519AC0922901884356783RH286395645.92    1AC104115, AC092290, AC104115
S/G/Y/R/B/O NT_006519AC0922901884359113RH363785650.30    1AC104115, AC092290, AC104115
S/G/Y/R/B/O NT_006519AC0922901884367903RH802265651.83    1AC104115, AC092290, AC104115
S/G/Y/R/B/O NT_006519AC0922901884762873WI-2865    5545.101AC104115, AC106766, AC008610, AC092290, AC104115, AC106766
S/G/Y/R/B/O NT_006519AC1067661885016091RH784255650.30    1AC104115, AC008610, AC104115, AC106766
S/G/Y/R/B/O NT_006519AC0342131885985473          
S/G/Y/R/B/O NT_006519AC1100001887627543D5S408    5547.201AC022095, AC025336, AC106813, AC022095, AC025336, AC106813, AC108083, AC110000
S/G/Y/R/B/O NT_006519AC1100001887627543RH625  56490.00  1AC022095, AC025336, AC106813, AC022095, AC025336, AC106813, AC108083, AC110000
S/G/Y/R/B/O NT_006519AC1100001887627543RH132935649.09    1AC022095, AC025336, AC106813, AC022095, AC025336, AC106813, AC108083, AC110000
S/G/Y/R/B/O NT_006519AC1100001887712493RH1021205652.03    1AC022095, AC025336, AC106813, AC022095, AC025336, AC106813, AC108083, AC110000
S/G/Y/R/B/O NT_006519AC1068131887773722RH802975657.43    1AC025336, AC025336, AC106813, AC108083
S/G/Y/R/B/O NT_006519AC1068131887780732RH789555649.09    1AC025336, AC025336, AC106813, AC108083
S/G/Y/R/B/O NT_006519AC1068131887781412WI-22407    5546.801AC025336, AC025336, AC106813, AC108083
S/G/Y/R/B/O NT_006519AC1068131887781412RH602035649.09    1AC025336, AC025336, AC106813, AC108083
S/G/Y/R/B/O NT_006519AC1068131887796822RH115015653.90    1AC025336, AC025336, AC106813, AC108083
S/G/Y/R/B/O NT_006519AC1068131888032302RH940555652.03    1AC022095, AC025336, AC022095, AC025336, AC106813, AC108083
S/G/Y/R/B/O NT_006519AC0253361888322491          
S/G/Y/R/B/O NT_006519AC0232551888398691          
S/G/Y/R/B/O NT_006519AC1134271888528021          
S/G/Y/R/B/O NT_006519AC0220951888621101          
S/G/Y/R/B/O NT_006519AC1068231889559393          
S/G/Y/R/B/O NT_006519AC0224131890290553RH761755657.43    1AC023255, AC113427, AC022413, AC023255, AC113427, M61829
S/G/Y/R/B/O NT_006519AC0224131890305173RH476735650.70    1AC023255, AC113427, AC022413, AC023255, AC113427, M61829
S/G/Y/R/B/O NT_006519AC0224131890313193RH779495649.09    1AC023255, AC113427, AC022413, AC023255, AC113427, M61829
S/G/Y/R/B/O NT_006519AC0224131890495643RH411775650.30    1AC023255, AC113427, AC022413, AC023255, AC113427
S/G/Y/R/B/O NT_006519AC0224131890684613RH752785652.03    1AC023255, AC113427, AC022413, AC023255, AC113427
S/G/Y/R/B/O NT_006519AC0224131890861213WI-15997    5546.801AC016572, AC023255, AC113427, AC016572, AC022413, AC023255, AC113427
S/G/Y/R/B/O NT_006519AC0224131890861213RH600065649.09    1AC016572, AC023255, AC113427, AC016572, AC022413, AC023255, AC113427
S/G/Y/R/B/O NT_006519AC0165721891590953          
S/G/Y/R/B/O NT_006519AC0918741892215762RH7611515178.75    2AC009754, AC025917, AC009754, AC025917, AC073438, AC091874
S/G/Y/R/B/O NT_006519AC0918741892949902RH419505633.18    1 AC091874
S/G/Y/R/B/O NT_006519AC0086201892985002RH752035653.69    1AC091874, AC008620, AC091874
S/G/Y/R/B/O NT_006519AC0086201892985632RH465205650.70    1AC091874, AC008620, AC091874
S/G/Y/R/B/O NT_006519AC0084431894694183SGC31965    5545.201AC008620, AC008443, AC008620, AL161615
S/G/Y/R/B/O NT_006519AC0084431894694183RH599075649.09    1AC008620, AC008443, AC008620, AL161615
S/G/Y/R/B/O NT_006519AC0084431894695773RH103265650.30    1AC008620, AC008443, AC008620, AL161615
S/G/Y/R/B/O NT_006519AC0084431894696503RH123105650.30    1AC008620, AC008443, AC008620, AL161615
S/G/Y/R/B/O NT_006519AC0084431894710303SGC34615    5546.801AC008620, AC008443, AC008620, AL161615
S/G/Y/R/B/O NT_006519AC0084431894710303RH597445649.09    1AC008620, AC008443, AC008620, AL161615
S/G/Y/R/B/O NT_006519AC0084431894710713RH674455650.30    1AC008620, AC008443, AC008620, AL161615
S/G/Y/R/B/O NT_006519AC0084431894714083WI-12627    5546.801 AC008443, AL161615
S/G/Y/R/B/O NT_006519AC0084431894714083RH602505649.09    1 AC008443, AL161615
S/G/Y/R/B/O NT_006519AC0084431894851403D5S2907    5546.801 AL161615
S/G/Y/R/B/O NT_006519AC0084431894851403RH746805649.09    1 AL161615
S/G/Y/R/B/O NT_006519AC0084431894891453RH202445650.50    1 AC008443, AL161615
S/G/Y/R/B/O NT_006519AC0084431894978683RH704395649.09    1 AC008443, AL161615


  NT_006519 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006519AC0084431894978803RH32875  56484.005546.801 AC008443, AL161615
S/G/Y/R/B/O NT_006519AC0084431894978803RH599345649.09    1 AC008443, AL161615
S/G/Y/R/B/O NT_006519 - RH1037885658.08    1AC113425, AC113425
S/G/Y/R/B/O NT_006519 - RH122505663.94    1AC008470, AC010216, AC008470, AC010216
S/G/Y/R/B/O NT_006519 - RH285115662.21    1AC008714, AC093310, AC008714, AC093222, AC093310
S/G/Y/R/B/O NT_006519 - RH598115657.65    1AC110005, AC112170, AC110005, AC112170
S/G/Y/R/B/O NT_006519 - RH598425657.75    1AC008570, AC110005, AC008570, AC110005
S/G/Y/R/B/O NT_006519 - RH674325661.42    2AC010239, AC026400, AC116354, AC116427, AC010239, AC026400, AC116354, AC116427
S/G/Y/R/B/O NT_006519 - RH690935661.42    0AC010297, AC010297
S/G/Y/R/B/O NT_006519 - RH753885660.74    1AC010299, AC091821, AC010299, AC091821
S/G/Y/R/B/O NT_006519 - RH766795663.25    1AC110005, AC112170, AC110005, AC112170
S/G/Y/R/B/O NT_006519 - RH799875658.41    1AC023559, AC113425, AC023559, AC113425