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  Chromosome 5 - RH Maps - Single Contig
 

Chromosome 5 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_023124
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023124AC114323301690091          
S/G/Y/R/B/O NT_023124AC016808301846731          
S/G/Y/R/B/O NT_023124AC027345302382693          
S/G/Y/R/B/O NT_023124AC010340304625453WI-4325    5116.701AC106784, AC010340, AC106784
S/G/Y/R/B/O NT_023124AC106784304672942          
S/G/Y/R/B/O NT_023124AC112172305411633RH1044175110.56    1AC106784, AC106784, AC112172
S/G/Y/R/B/O NT_023124AC025771306313533          
S/G/Y/R/B/O NT_023124AC099486307685223          
S/G/Y/R/B/O NT_023124AC108082308807482          
S/G/Y/R/B/O NT_023124AC010374310113273WI-7435    5116.601AC108082, AC010374, AC108082
S/G/Y/R/B/O NT_023124AC018765311181723RH30904  51118.00  1 AC010418, AC018765
S/G/Y/R/B/O NT_023124AC091856312053413          
S/G/Y/R/B/O NT_023124AC114300313796731          
S/G/Y/R/B/O NT_023124AC106735314947912          
S/G/Y/R/B/O NT_023124AC116309315150333          
S/G/Y/R/B/O NT_023124AC025757316911453          
S/G/Y/R/B/O NT_023124AC099517317612753          
S/G/Y/R/B/O NT_023124AC113429318723823          
S/G/Y/R/B/O NT_023124AC026433319130523AFM284VC1    5119.801 AC026433
S/G/Y/R/B/O NT_023124AC091854320160263CHLC.GATA5C10.940    5120.901 AC078928, AC091854, AC093215
S/G/Y/R/B/O NT_023124AC091854320538453WI-1282    5122.601AC026421, AC026421, AC078928, AC091854
S/G/Y/R/B/O NT_023124AC026421320588953          
S/G/Y/R/B/O NT_023124AC091867322155803          
S/G/Y/R/B/O NT_023124AC113386323047673          
S/G/Y/R/B/O NT_023124AC091898324657283RH598045116.10  5122.101 AC026712
S/G/Y/R/B/O NT_023124AC091898324712253RH489235116.30    1 AC008159, AC026712, AC026728, AC091898
S/G/Y/R/B/O NT_023124AC008768325430263RH912865116.00    1AC106802, AC008159, AC008768, AC026712, AC106802
S/G/Y/R/B/O NT_023124AC008768325705523RH928665116.00    1AC106802, AC008159, AC008768, AC026712, AC106802
S/G/Y/R/B/O NT_023124AC106802326159962          
S/G/Y/R/B/O NT_023124AC022417326955063RH363135112.74    1AC106802, AC022417, AC106802
S/G/Y/R/B/O NT_023124AC022417326968943RH913075116.00    1AC106802, AC022417, AC106802
S/G/Y/R/B/O NT_023124AC022447328902123RH115985109.71    1AC010469, AC010469, AC022447
S/G/Y/R/B/O NT_023124AC010469329070253          
S/G/Y/R/B/O NT_023124AC027330330019761          
S/G/Y/R/B/O NT_023124AC025458330387401D5S477    5124.601AC027330, AC025458, AC026718, AC027330
S/G/Y/R/B/O NT_023124AC025458330387401RH134795116.0051193.00  1AC027330, AC025458, AC026718, AC027330
S/G/Y/R/B/O NT_023124AC025458330659611RH412415116.00    1AC027330, AC025458, AC027330
S/G/Y/R/B/O NT_023124AC010449331349851RH600395114.18  5118.201 AC008803, AC010449
S/G/Y/R/B/O NT_023124AC010449331351831RH447215115.90    1 AC008803, AC010449
S/G/Y/R/B/O NT_023124AC114299331462241          
S/G/Y/R/B/O NT_023124AC022443332074583          
S/G/Y/R/B/O NT_023124AC010343332270243          
S/G/Y/R/B/O NT_023124AC034223333812033RH487465119.98    1 AC034223
S/G/Y/R/B/O NT_023124AC025459334207193          
S/G/Y/R/B/O NT_023124AC026703335365473RH656525119.88    1AC025459, AC025459, AC026703, AC026751
S/G/Y/R/B/O NT_023124AC026703335980033SGC32140    5125.701 AC026703, AC026751
S/G/Y/R/B/O NT_023124AC008766337856513WI-16354    5127.201AC021128, AC074134, AC008766, AC021128, AC074134
S/G/Y/R/B/O NT_023124AC008766337856513RH598605128.46    1AC021128, AC074134, AC008766, AC021128, AC074134
S/G/Y/R/B/O NT_023124AC021128337879311RH1020555128.77    2AC025857, AC069185, AC090790, AC021128, AC025857, AC069185, AC090790, AF271897
S/G/Y/R/B/O NT_023124AC025178338434732RH463665116.00    1AC022444, AC008803, AC022423, AC022444, AC025178


  NT_023124 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023124AC025178339536872RH411675117.94    1AC022444, AC025181, AC022444, AC025178, AC025181
S/G/Y/R/B/O NT_023124AC025178339607102RH411545117.89    1AC022444, AC025181, AC022444, AC025181
S/G/Y/R/B/O NT_023124AC022444338825712RH651265116.00    1AC025178, AC008803, AC022423, AC022444, AC025178
S/G/Y/R/B/O NT_023124AC022444338853262RH601245116.10  5124.201AC025178, AC008803, AC022423, AC022444, AC025178
S/G/Y/R/B/O NT_023124AC022444338853372RH162745116.00    1AC025178, AC008803, AC022423, AC022444, AC025178
S/G/Y/R/B/O NT_023124AC022444338949672RH256505117.99    1AC025178, AC008803, AC022423, AC022444, AC025178
S/G/Y/R/B/O NT_023124AC022444338959162RH183875117.94    1AC025178, AC008803, AC022423, AC022444, AC025178
S/G/Y/R/B/O NT_023124AC022444339100422RH1029765118.09    1AC025178, AC022423, AC022444, AC025178
S/G/Y/R/B/O NT_023124AC025181339861992          
S/G/Y/R/B/O NT_023124AC091961340415043RH285385118.09    1AC025181, AC025181, AC091961
S/G/Y/R/B/O NT_023124AC091961340967043RH482075119.88    1AC008949, AC008949, AC091961
S/G/Y/R/B/O NT_023124AC008949342051443RH37894  51206.00  1AC034240, AC008949, AC034240
S/G/Y/R/B/O NT_023124AC008949342051823RH810885128.67    1AC034240, AC008949, AC034240
S/G/Y/R/B/O NT_023124AC034240342770303CHLC.GATA7C06    5127.901AC017039, AC017039
S/G/Y/R/B/O NT_023124AC074134343236851          
S/G/Y/R/B/O NT_023124AC017039343334591          
S/G/Y/R/B/O NT_023124 - RH264665112.34    0  
S/G/Y/R/B/O NT_023124 - RH412125110.35    0  
S/G/Y/R/B/O NT_023124 - RH464875119.98    1  
S/G/Y/R/B/O NT_023124 - RH602305119.98    1AC007606, AC023830, AC007606, AC013282, AC023830