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  Chromosome 5 - RH Maps - Single Contig
 

Chromosome 5 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033086 NT_023089 NT_006576 NT_033103 NT_029977 NT_016779 NT_033104 NT_023110
NT_033119 NT_023097 NT_023084 NT_023115 NT_023315 NT_033112 NT_006547 NT_023162
NT_006577 NT_023114 NT_023216 NT_023124 NT_026281 NT_023085 NT_033113 NT_033110
NT_006679 NT_023195 NT_033085 NT_006702 NT_023098 NT_028188 NT_031794 NT_023102
NT_023081 NT_006693 NT_016864 NT_033115 NT_033092 NT_006665 NT_006497 NT_006431
NT_033093 NT_006790 NT_006713 NT_026283 NT_023083 NT_033077 NT_033111 NT_033079
NT_007022 NT_006540 NT_030680 NT_029973 NT_028179 NT_033118 NT_006731 NT_023148
NT_023290 NT_033094 NT_033116 NT_006654 NT_033095 NT_033098 NT_033082 NT_033096
NT_023091 NT_006789 NT_033108 NT_006899 NT_006780 NT_030685 NT_025721 NT_033106
NT_025702 NT_023192 NT_029295 NT_033097 NT_016755 NT_029975 NT_033083 NT_033084
NT_023238 NT_033105 NT_007072 NT_033091 NT_016714 NT_006859 NT_006489 NT_029289
NT_033078 NT_023269 NT_023248 NT_030691 NT_006788 NT_030698 NT_033117 NT_033080
NT_023133 NT_006907 NT_023132 NT_033089 NT_006725 NT_023093 NT_006802 NT_006932
NT_006519


  NT_006932
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006932AC1121891877911371          
S/G/Y/R/B/O NT_006932AC1134261878518501RH410775652.03    1AC112189, AC112189, AC113426
S/G/Y/R/B/O NT_006932AC1134261878846441RH781755652.03    1AC112189, AC112189, AC113426
S/G/Y/R/B/O NT_006932AC1134261878916701RH14086  56457.00  2AC112189, AL606913, AC053505, AC112189, AC113426, AL513471, AL606913
S/G/Y/R/B/O NT_006932AC1134261878922361RH600685652.03    1AC112189, AC112189, AC113426
S/G/Y/R/B/O NT_006932AC1134261878922361WI-20166    5548.401AC112189, AC112189, AC113426
S/G/Y/R/B/O NT_006932AC1134261879283441RH42877  56462.00  1AC079983, AC112189, AC079983, AC112189, AC113426
S/G/Y/R/B/O NT_006932AC1134261879337541RH13923  56462.00  1AC112189, AC112189, AC113426
S/G/Y/R/B/O NT_006932AC1134261879341351RH448375652.03    1AC112189, AC112189, AC113426
S/G/Y/R/B/O NT_006932AC1134261879349051RH163795653.90    1AC112189, AC112189, AC113426
S/G/Y/R/B/O NT_006932AC1134261879355521RH177585654.22    1AC112189, AC112189, AC113426
S/G/Y/R/B/O NT_006932AC1134261879355731RH279005650.30    1AC112189, AC112189, AC113426
S/G/Y/R/B/O NT_006932AC1134261879362671RH411465652.03    1AC112189, AC112189, AC113426
S/G/Y/R/B/O NT_006932AC0799831878601771          
S/G/Y/R/B/O NT_006932AC0083931879723773RH461795652.03    1AC112189, AC113426, AC008393, AC092269, AC112189, AC113426
S/G/Y/R/B/O NT_006932AC0083931879820123RH1756  56508.00  1AC023924, AC112189, AC113426, AC008393, AC023924, AC092269, AC112189, AC113426
S/G/Y/R/B/O NT_006932AC0083931879821983RH74602  56502.00  1AC023924, AC112189, AC113426, AC008393, AC023924, AC092269, AC112189, AC113426
S/G/Y/R/B/O NT_006932AC0083931880027223RH666665657.10    1AC023924, AC112189, AC008393, AC023924, AC092269, AC112189
S/G/Y/R/B/O NT_006932AC0083931880193693RH985655652.03    1AC023924, AC079983, AC112189, AC008393, AC023924, AC079983, AC092269, AC112189
S/G/Y/R/B/O NT_006932AC0083931880418983RH601725652.03    1AC010313, AC023924, AC008393, AC010313, AC023924, AC092269
S/G/Y/R/B/O NT_006932AC0083931880418983SGC31697    5546.201AC010313, AC023924, AC008393, AC010313, AC023924, AC092269
S/G/Y/R/B/O NT_006932AC0083931880421033RH249415652.03    1AC010313, AC023924, AC008393, AC010313, AC023924, AC092269
S/G/Y/R/B/O NT_006932AC0083931880424723RH707195652.03    1AC010313, AC023924, AC008393, AC010313, AC023924, AC092269
S/G/Y/R/B/O NT_006932AC0083931880430523RH418875652.03    1AC010313, AC023924, AC008393, AC010313, AC023924, AC092269
S/G/Y/R/B/O NT_006932AC0083931880645253RH598285652.03    1AC010313, AC023924, AC010313, AC023924, AC092269
S/G/Y/R/B/O NT_006932AC0083931880645253WI-22658    5548.501AC010313, AC023924, AC010313, AC023924, AC092269
S/G/Y/R/B/O NT_006932AC0083931880671803RH600885645.92    1AC010313, AC023924, AC008393, AC010313, AC023924
S/G/Y/R/B/O NT_006932AC0083931880671803WI-20921    5544.101AC010313, AC023924, AC008393, AC010313, AC023924
S/G/Y/R/B/O NT_006932AC0083931880678473RH600415652.03    1AC010313, AC023924, AC008393, AC010313, AC023924
S/G/Y/R/B/O NT_006932AC0083931880678473SGC34653    5548.201AC010313, AC023924, AC008393, AC010313, AC023924
S/G/Y/R/B/O NT_006932AC0083931880679703RH125385653.90    1AC010313, AC023924, AC008393, AC010313, AC023924
S/G/Y/R/B/O NT_006932AC0083931880888763RH940875652.03    1AC010285, AC010313, AC023924, AC008393, AC010285, AC010313, AC023924
S/G/Y/R/B/O NT_006932AC0102851881168333RH106735653.90    1AC010313, AC026413, AC010285, AC010313, AC026413
S/G/Y/R/B/O NT_006932AC0102851881185013RH286205653.90    1AC023924, AC026413, AC010285, AC023924, AC026413
S/G/Y/R/B/O NT_006932AC0102851881196573RH265435652.03    1AC010313, AC023924, AC026413, AC010285, AC010313, AC023924, AC026413
S/G/Y/R/B/O NT_006932AC0102851881884563RH8042  56467.00  1AC026413, AC010285, AC026413
S/G/Y/R/B/O NT_006932AC0102851882034313RH483845650.40    2AC010313, AC026413, AC010285, AC010313, AC026413
S/G/Y/R/B/O NT_006932AC0264131882126683          
S/G/Y/R/B/O NT_006932AC0103131882427062RH483845650.40    2AC010285, AC026413, AC010285, AC010313, AC026413
S/G/Y/R/B/O NT_006932AC0239241882398661          
S/G/Y/R/B/O NT_006932 - RH100055650.30    1AC092290, AC104115, AC092290, AC104115
S/G/Y/R/B/O NT_006932 - RH1020435653.80    1AC023559, AC109479, AC113425, AC023559, AC109479, AC113425
S/G/Y/R/B/O NT_006932 - RH1021205652.03    1AC022095, AC025336, AC106813, AC110000, AC022095, AC025336, AC106813, AC108083, AC110000
S/G/Y/R/B/O NT_006932 - RH1028105652.55    1AC022096, AC026097, AC022096, AC026097, AC061981
S/G/Y/R/B/O NT_006932 - RH103265650.30    1AC008443, AC008620, AC008443, AC008620, AL161615
S/G/Y/R/B/O NT_006932 - RH109895654.96    2AC008454, AC106795, AC106825, AC008454, AC106795, AC106825
S/G/Y/R/B/O NT_006932 - RH123105650.30    1AC008443, AC008620, AC008443, AC008620, AL161615
S/G/Y/R/B/O NT_006932 - RH132935649.09    1AC022095, AC025336, AC106813, AC110000, AC022095, AC025336, AC106813, AC108083, AC110000
S/G/Y/R/B/O NT_006932 - RH168295656.78    1AC025845, AC104117, AC025845, AC104117
S/G/Y/R/B/O NT_006932 - RH174605656.78    1AC025845, AC104117, AC025845, AC104117


  NT_006932 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006932 - RH180605650.40    0AC008393, AC010313, AC023924, AC008393, AC010313, AC023924, AC092269
S/G/Y/R/B/O NT_006932 - RH202445650.50    1AC008443, AC008443, AL161615
S/G/Y/R/B/O NT_006932 - RH267075653.07    0AC008393, AC010313, AC023924, AC008393, AC010313, AC023924
S/G/Y/R/B/O NT_006932 - RH267805651.52    1AC091821, AC113388, AC091821, AC113388
S/G/Y/R/B/O NT_006932 - RH363785650.30    1AC092290, AC104115, AC092290, AC104115
S/G/Y/R/B/O NT_006932 - RH411255655.49    2AC010299, AC091821, AC113388, AC010299, AC091821, AC113388
S/G/Y/R/B/O NT_006932 - RH411565656.45    1AC025845, AC104117, AC025845, AC104117
S/G/Y/R/B/O NT_006932 - RH411595654.85    1AC010216, AC025845, AC104117, AC010216, AC025845, AC104117
S/G/Y/R/B/O NT_006932 - RH411775650.30    1AC022413, AC023255, AC113427, AC022413, AC023255, AC113427
S/G/Y/R/B/O NT_006932 - RH411895656.45    1AC025845, AC025845, AC104117, AC025845, AC025845, AC104117
S/G/Y/R/B/O NT_006932 - RH465205650.70    1AC008620, AC091874, AC008620, AC091874
S/G/Y/R/B/O NT_006932 - RH476735650.70    1AC022413, AC023255, AC113427, AC022413, AC023255, AC113427, M61829
S/G/Y/R/B/O NT_006932 - RH597445649.09    1AC008443, AC008620, AC008443, AC008620, AL161615
S/G/Y/R/B/O NT_006932 - RH599075649.09    1AC008443, AC008620, AC008443, AC008620, AL161615
S/G/Y/R/B/O NT_006932 - RH599345649.09    1AC008443, AC008443, AL161615
S/G/Y/R/B/O NT_006932 - RH600065649.09    1AC016572, AC022413, AC023255, AC113427, AC016572, AC022413, AC023255, AC113427
S/G/Y/R/B/O NT_006932 - RH602035649.09    1AC025336, AC106813, AC025336, AC106813, AC108083
S/G/Y/R/B/O NT_006932 - RH602465652.96    1AC091821, AC113388, AC091821, AC113388
S/G/Y/R/B/O NT_006932 - RH602505649.09    1AC008443, AC008443, AL161615
S/G/Y/R/B/O NT_006932 - RH655405649.09    1AC016155, AC104115, AC016155, AC104115
S/G/Y/R/B/O NT_006932 - RH674455650.30    1AC008443, AC008620, AC008443, AC008620, AL161615
S/G/Y/R/B/O NT_006932 - RH704395649.09    1AC008443, AC008443, AL161615
S/G/Y/R/B/O NT_006932 - RH746805649.09    1 AL161615
S/G/Y/R/B/O NT_006932 - RH752785652.03    1AC022413, AC023255, AC113427, AC022413, AC023255, AC113427
S/G/Y/R/B/O NT_006932 - RH778775653.80    1AC023559, AC113425, AC023559, AC113425
S/G/Y/R/B/O NT_006932 - RH779495649.09    1AC022413, AC023255, AC113427, AC022413, AC023255, AC113427, M61829
S/G/Y/R/B/O NT_006932 - RH784255650.30    1AC104115, AC106766, AC008610, AC104115, AC106766
S/G/Y/R/B/O NT_006932 - RH784285654.54    0  
S/G/Y/R/B/O NT_006932 - RH789555649.09    1AC025336, AC106813, AC025336, AC106813, AC108083
S/G/Y/R/B/O NT_006932 - RH802265651.83    1AC092290, AC104115, AC092290, AC104115
S/G/Y/R/B/O NT_006932 - RH807955656.99    2AC023788, AC090063, AC116354, AC008542, AC023788, AC090063, AC116354
S/G/Y/R/B/O NT_006932 - RH935855652.55    1AC025845, AC104117, AC025845, AC104117
S/G/Y/R/B/O NT_006932 - RH940555652.03    1AC022095, AC025336, AC106813, AC022095, AC025336, AC106813, AC108083
S/G/Y/R/B/O NT_006932 - RH985035652.55    2AC025845, AC104117, AC113348, AC025845, AC104117, AC113348
S/G/Y/R/B/O NT_006932 - RH990665653.90    0