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  Chromosome 13 - RH Maps - Single Contig
 

Chromosome 13 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009799 NT_033260 NT_033997 NT_009984 NT_009910 NT_033922 NT_033259 NT_024524
NT_028344 NT_009866 NT_009952 NT_027140 NT_024498


  NT_009866
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009866AC026816859092851          
S/G/Y/R/B/O NT_009866AL646005859111623          
S/G/Y/R/B/O NT_009866AL445207859494683          
S/G/Y/R/B/O NT_009866AL590287860949583          
S/G/Y/R/B/O NT_009866AL161432861309713          
S/G/Y/R/B/O NT_009866AL390731861964461          
S/G/Y/R/B/O NT_009866AL606862863604463          
S/G/Y/R/B/O NT_009866AL356096865531643RH6483310482.20    2AL358790, AC009144, AL356096, AL358790
S/G/Y/R/B/O NT_009866AL355003866016963          
S/G/Y/R/B/O NT_009866AL592067867349053          
S/G/Y/R/B/O NT_009866AL162576868160463          
S/G/Y/R/B/O NT_009866AL360267869983802RH31293  132816.00  1 AL360267
S/G/Y/R/B/O NT_009866AL360267870643642RH4446213257.27    1 AL360267
S/G/Y/R/B/O NT_009866AL359472870752103          
S/G/Y/R/B/O NT_009866AL355578871266303          
S/G/Y/R/B/O NT_009866AL603883872995223RH10397613257.37    1 AL603883
S/G/Y/R/B/O NT_009866AL355605873163643RH5318113257.27  13233.101 AL355605
S/G/Y/R/B/O NT_009866AL445647874028863RH9213913257.37    1 AL445647
S/G/Y/R/B/O NT_009866AL450064875343053          
S/G/Y/R/B/O NT_009866AL162498876055843CHLC.GATA73H01    13233.101 AC015654, AL162498
S/G/Y/R/B/O NT_009866AL354896876196783          
S/G/Y/R/B/O NT_009866AL445210878293213          
S/G/Y/R/B/O NT_009866AL355677879269313          
S/G/Y/R/B/O NT_009866AL354996881002333          
S/G/Y/R/B/O NT_009866AL445984881551143          
S/G/Y/R/B/O NT_009866AL157763883364333          
S/G/Y/R/B/O NT_009866AL603763883880333          
S/G/Y/R/B/O NT_009866AL445242884260093WI-3424    13236.101 AL445242, AL445583
S/G/Y/R/B/O NT_009866AL445242884926833RH277  132853.00  1  
S/G/Y/R/B/O NT_009866AL356297885518263          
S/G/Y/R/B/O NT_009866AL603716885725533          
S/G/Y/R/B/O NT_009866AL162573886482613          
S/G/Y/R/B/O NT_009866AL353635888127703          
S/G/Y/R/B/O NT_009866AL354997888446333RH31294  132860.00  1 AC016373, AL354997
S/G/Y/R/B/O NT_009866AL163533890868573CHLC.GATA50D02    13233.101 AL163533
S/G/Y/R/B/O NT_009866AL163533890868583CHLC.GATA48C10    13234.601 AL163533
S/G/Y/R/B/O NT_009866AL583783891505113CHLC.GATA7    13237.701 AC027206, AC092922, AL583783
S/G/Y/R/B/O NT_009866AL158067893063623WI-10332    13234.601 AL158067
S/G/Y/R/B/O NT_009866AL158067893409483RH4906213257.27132874.00  1 AL158067
S/G/Y/R/B/O NT_009866AL355821893843773          
S/G/Y/R/B/O NT_009866AL591764894803863          
S/G/Y/R/B/O NT_009866AL359842894863723          
S/G/Y/R/B/O NT_009866AL442126896213153          
S/G/Y/R/B/O NT_009866AL354915897531043          
S/G/Y/R/B/O NT_009866AL139185899094463          
S/G/Y/R/B/O NT_009866AL589791900328463          
S/G/Y/R/B/O NT_009866AL162712900719423          
S/G/Y/R/B/O NT_009866AL160152903293883WI-10693    13236.101 AL160152, AL359772
S/G/Y/R/B/O NT_009866AL590803903622243          
S/G/Y/R/B/O NT_009866AL355799905176563WI-4658    13231.201 AC018854, AL355799


  NT_009866 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009866AL512659905681603          
S/G/Y/R/B/O NT_009866AL157878906465773          
S/G/Y/R/B/O NT_009866AL353734907634503          
S/G/Y/R/B/O NT_009866AL162375909499583          
S/G/Y/R/B/O NT_009866AL138714909747053RH4506413255.96    1 AL138714
S/G/Y/R/B/O NT_009866AL138714909758703RH4855213257.37    1 AL138714
S/G/Y/R/B/O NT_009866AL356118910964943RH7655213256.16    1 AL356118
S/G/Y/R/B/O NT_009866AL356118911068303RH5335913257.27132874.0013233.101 AL356118
S/G/Y/R/B/O NT_009866AL356118911400373RH10431813257.57    1 AL356118
S/G/Y/R/B/O NT_009866AL157821912432063          
S/G/Y/R/B/O NT_009866AL596221913818873          
S/G/Y/R/B/O NT_009866AL162456916148743RH5328913259.21  13238.101 AL162456
S/G/Y/R/B/O NT_009866AL157768916195563          
S/G/Y/R/B/O NT_009866AL163537917834393RH6761013258.96    1 AL163537
S/G/Y/R/B/O NT_009866AL157815918617713RH7794613258.96    1 AL157815
S/G/Y/R/B/O NT_009866AL157815918768533WI-4574    13236.301 AL157815
S/G/Y/R/B/O NT_009866AL159152919904213RH38000  132927.00  1 AL159152
S/G/Y/R/B/O NT_009866AL159152920691673RH6554913262.39    1 AL159152
S/G/Y/R/B/O NT_009866AL159152921078603RH3967713262.39    1 AL159152
S/G/Y/R/B/O NT_009866AL354871921739953WI-5544    13246.601 AL354871
S/G/Y/R/B/O NT_009866 - RH7789913257.37    0AL355578, AL355578